RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 AKAP14Q86UN6 197 aa13.7□□□□□ -0.22
CHMP3-207ENST00000485465 RNF152Q8N8N0 203 aa13.7□□□□□ -0.22
CHMP3-207ENST00000485465 OR4X2Q8NGF9 303 aa13.7□□□□□ -0.22
CHMP3-207ENST00000485465 THAP6Q8TBB0 222 aa13.7□□□□□ -0.22
CHMP3-207ENST00000485465 MBD2Q9UBB5 411 aa13.7□□□□□ -0.22
CHMP3-207ENST00000485465 PAIP2BQ9ULR5 123 aaKnown RBP13.7□□□□□ -0.22
CHMP3-207ENST00000485465 OR2J3O76001 311 aa13.69□□□□□ -0.22
CHMP3-207ENST00000485465 OR8U8P0C7N1 319 aa13.69□□□□□ -0.22
CHMP3-207ENST00000485465 P2RY1P47900 373 aa13.69□□□□□ -0.22
CHMP3-207ENST00000485465 TPPP2P59282 170 aa13.69□□□□□ -0.22
CHMP3-207ENST00000485465 RAB11AP62491 216 aa13.69□□□□□ -0.22
CHMP3-207ENST00000485465 RHOGP84095 191 aa13.69□□□□□ -0.22
CHMP3-207ENST00000485465 TCTEX1D4Q5JR98 221 aa13.69□□□□□ -0.22
CHMP3-207ENST00000485465 TMEM14EPQ6UXP3 125 aa13.69□□□□□ -0.22
CHMP3-207ENST00000485465 NECAP1Q8NC96 275 aa13.69□□□□□ -0.22
CHMP3-207ENST00000485465 MISP3Q96FF7 219 aa13.69□□□□□ -0.22
CHMP3-207ENST00000485465 LYRM2Q9NU23 88 aaPredicted RBP13.69□□□□□ -0.22
CHMP3-207ENST00000485465 THYN1Q9P016 225 aa13.69□□□□□ -0.22
CHMP3-207ENST00000485465 FBXL7Q9UJT9 491 aa13.69□□□□□ -0.22
CHMP3-207ENST00000485465 FAM24AA6NFZ4 105 aa13.68□□□□□ -0.22
CHMP3-207ENST00000485465 FAM223BA6NKX1 122 aa13.68□□□□□ -0.22
CHMP3-207ENST00000485465 G3V3Q6 166 aa13.68□□□□□ -0.22
CHMP3-207ENST00000485465 SMLR1H3BR10 107 aa13.68□□□□□ -0.22
CHMP3-207ENST00000485465 CORTO00230 105 aa13.68□□□□□ -0.22
CHMP3-207ENST00000485465 NDUFB8O95169 186 aa13.68□□□□□ -0.22
CHMP3-207ENST00000485465 IFNA4P05014 189 aa13.68□□□□□ -0.22
CHMP3-207ENST00000485465 RPLP1P05386 114 aaKnown RBP13.68□□□□□ -0.22
CHMP3-207ENST00000485465 CD28P10747 220 aa13.68□□□□□ -0.22
CHMP3-207ENST00000485465 SLC25A4P12235 298 aa13.68□□□□□ -0.22
CHMP3-207ENST00000485465 CAV2P51636 162 aa13.68□□□□□ -0.22
CHMP3-207ENST00000485465 KRTAP10-3P60369 221 aa13.68□□□□□ -0.22
CHMP3-207ENST00000485465 DEFA5Q01523 94 aa13.68□□□□□ -0.22
CHMP3-207ENST00000485465 ETV3LQ6ZN32 361 aa13.68□□□□□ -0.22
CHMP3-207ENST00000485465 FAM223AQ8IWN6 122 aa13.68□□□□□ -0.22
CHMP3-207ENST00000485465 TCTE3Q8IZS6 198 aa13.68□□□□□ -0.22
CHMP3-207ENST00000485465 RNASEH2CQ8TDP1 164 aaKnown RBP13.68□□□□□ -0.22
CHMP3-207ENST00000485465 RIPPLY3P57055 190 aa13.67□□□□□ -0.22
CHMP3-207ENST00000485465 KIAA0141Q14154 515 aaPredicted RBP13.67□□□□□ -0.22
CHMP3-207ENST00000485465 MYOZ3Q8TDC0 251 aa13.67□□□□□ -0.22
CHMP3-207ENST00000485465 WFDC12Q8WWY7 111 aa13.67□□□□□ -0.22
CHMP3-207ENST00000485465 DCUN1D4Q92564 292 aa13.67□□□□□ -0.22
CHMP3-207ENST00000485465 USMG5Q96IX5 58 aa13.67□□□□□ -0.22
CHMP3-207ENST00000485465 FBN1P35555 2871 aaKnown RBP13.66□□□□□ -0.22
CHMP3-207ENST00000485465 IGSF23A1L1A6 192 aa13.66□□□□□ -0.22
CHMP3-207ENST00000485465 PMS2P5A8MQ11 134 aa13.66□□□□□ -0.22
CHMP3-207ENST00000485465 I3L2K1 104 aa13.66□□□□□ -0.22
CHMP3-207ENST00000485465 K7EIM0 57 aa13.66□□□□□ -0.22
CHMP3-207ENST00000485465 MT-CO2P00403 227 aa13.66□□□□□ -0.22
CHMP3-207ENST00000485465 METTL15P1P0C7V9 234 aa13.66□□□□□ -0.22
CHMP3-207ENST00000485465 ATP5G2Q06055 141 aa13.66□□□□□ -0.22
CHMP3-207ENST00000485465 EXOSC2Q13868 293 aaKnown RBP13.66□□□□□ -0.22
CHMP3-207ENST00000485465 C15orf32Q32M92 178 aa13.66□□□□□ -0.22
CHMP3-207ENST00000485465 TMEM252Q8N6L7 170 aa13.66□□□□□ -0.22
CHMP3-207ENST00000485465 ZNF491Q8N8L2 437 aa13.66□□□□□ -0.22
CHMP3-207ENST00000485465 C11orf44Q8N8P7 122 aa13.66□□□□□ -0.22
CHMP3-207ENST00000485465 PINX1Q96BK5 328 aaKnown RBP13.66□□□□□ -0.22
CHMP3-207ENST00000485465 NEURL2Q9BR09 285 aa13.66□□□□□ -0.22
CHMP3-207ENST00000485465 SLC25A31Q9H0C2 315 aa13.66□□□□□ -0.22
CHMP3-207ENST00000485465 IGHV3-21A0A0B4J1V1 117 aa13.65□□□□□ -0.22
CHMP3-207ENST00000485465 A0A0G2JLM5 398 aa13.65□□□□□ -0.22
CHMP3-207ENST00000485465 TCRBV4S1A1TA0A5B7 111 aa13.65□□□□□ -0.22
CHMP3-207ENST00000485465 OPRK1P41145 380 aa13.65□□□□□ -0.22
CHMP3-207ENST00000485465 OR8G2PQ6IF36 304 aa13.65□□□□□ -0.22
CHMP3-207ENST00000485465 VN1R17PQ8TDU5 208 aa13.65□□□□□ -0.22
CHMP3-207ENST00000485465 FNDC4Q9H6D8 234 aaPredicted RBP13.65□□□□□ -0.22
CHMP3-207ENST00000485465 FXYD6-FXYD2A0A087WZ82 144 aa13.64□□□□□ -0.23
CHMP3-207ENST00000485465 RPS10-NUDT3A0A1W2PQS6 291 aa13.64□□□□□ -0.23
CHMP3-207ENST00000485465 MFSD2BA6NFX1 497 aa13.64□□□□□ -0.23
CHMP3-207ENST00000485465 PRSS46E5RG02 174 aa13.64□□□□□ -0.23
CHMP3-207ENST00000485465 GPX4P36969 197 aaPredicted RBP13.64□□□□□ -0.23
CHMP3-207ENST00000485465 SULT1A1P50225 295 aa13.64□□□□□ -0.23
CHMP3-207ENST00000485465 EWSR1Q01844 656 aaKnown RBP eCLIP13.64□□□□□ -0.23
CHMP3-207ENST00000485465 CD300CQ08708 224 aa13.64□□□□□ -0.23
CHMP3-207ENST00000485465 MLANAQ16655 118 aa13.64□□□□□ -0.23
CHMP3-207ENST00000485465 HAPLN4Q86UW8 402 aa13.64□□□□□ -0.23
CHMP3-207ENST00000485465 SCARB1Q8WTV0 552 aa13.64□□□□□ -0.23
CHMP3-207ENST00000485465 CXorf58Q96LI9 332 aa13.64□□□□□ -0.23
CHMP3-207ENST00000485465 UBE2E2Q96LR5 201 aa13.64□□□□□ -0.23
CHMP3-207ENST00000485465 CITED2Q99967 270 aaPredicted RBP13.64□□□□□ -0.23
CHMP3-207ENST00000485465 CST7O76096 145 aa13.63□□□□□ -0.23
CHMP3-207ENST00000485465 SCAF4O95104 1147 aaKnown RBP13.63□□□□□ -0.23
CHMP3-207ENST00000485465 IGHV3-48P01763 117 aa13.63□□□□□ -0.23
CHMP3-207ENST00000485465 RPL12P30050 165 aaKnown RBP13.63□□□□□ -0.23
CHMP3-207ENST00000485465 CDX1P47902 265 aaPredicted RBP13.63□□□□□ -0.23
CHMP3-207ENST00000485465 CD69Q07108 199 aa13.63□□□□□ -0.23
CHMP3-207ENST00000485465 ARL16Q0P5N6 197 aa13.63□□□□□ -0.23
CHMP3-207ENST00000485465 HIST2H2BDQ6DRA6 164 aa13.63□□□□□ -0.23
CHMP3-207ENST00000485465 ETFRF1Q6IPR1 90 aa13.63□□□□□ -0.23
CHMP3-207ENST00000485465 ZNF546Q86UE3 836 aa13.63□□□□□ -0.23
CHMP3-207ENST00000485465 STX12Q86Y82 276 aa13.63□□□□□ -0.23
CHMP3-207ENST00000485465 OR10P1Q8NGE3 313 aa13.63□□□□□ -0.23
CHMP3-207ENST00000485465 EEF1AKMT3Q96AZ1 226 aa13.63□□□□□ -0.23
CHMP3-207ENST00000485465 TSSC4Q9Y5U2 329 aaPredicted RBP13.63□□□□□ -0.23
CHMP3-207ENST00000485465 S4R3C0 116 aa13.63□□□□□ -0.23
CHMP3-207ENST00000485465 ATRQ13535 2644 aa13.62□□□□□ -0.23
CHMP3-207ENST00000485465 IGHV3-11P01762 117 aa13.62□□□□□ -0.23
CHMP3-207ENST00000485465 IGHV3-23P01764 117 aa13.62□□□□□ -0.23
CHMP3-207ENST00000485465 NUP62P37198 522 aaPredicted RBP13.62□□□□□ -0.23
CHMP3-207ENST00000485465 NHLH2Q02577 135 aa13.62□□□□□ -0.23
CHMP3-207ENST00000485465 BAXQ07812 192 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 870.8 ms