RNA–Protein interactions for RNA: ENST00000485306.1

TRIM54-203, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-203ENST00000485306 B9D2Q9BPU9 175 aa12.81□□□□□ -0.36
TRIM54-203ENST00000485306 CEBPZOSA8MTT3 80 aa12.8□□□□□ -0.36
TRIM54-203ENST00000485306 TEX22C9J3V5 150 aa12.8□□□□□ -0.36
TRIM54-203ENST00000485306 GIPP09681 153 aaPredicted RBP12.8□□□□□ -0.36
TRIM54-203ENST00000485306 MYOD1P15172 320 aa12.8□□□□□ -0.36
TRIM54-203ENST00000485306 H2BFSP57053 126 aa12.8□□□□□ -0.36
TRIM54-203ENST00000485306 ERHP84090 104 aaKnown RBP12.8□□□□□ -0.36
TRIM54-203ENST00000485306 CHAC2Q8WUX2 184 aa12.8□□□□□ -0.36
TRIM54-203ENST00000485306 DLX4Q92988 240 aaPredicted RBP12.8□□□□□ -0.36
TRIM54-203ENST00000485306 HINT2Q9BX68 163 aa12.8□□□□□ -0.36
TRIM54-203ENST00000485306 ZNF436Q9C0F3 470 aaPredicted RBP12.8□□□□□ -0.36
TRIM54-203ENST00000485306 ZNF256Q9Y2P7 627 aaPredicted RBP12.8□□□□□ -0.36
TRIM54-203ENST00000485306 TNCP24821 2201 aa12.79□□□□□ -0.36
TRIM54-203ENST00000485306 IGLC7A0M8Q6 106 aa12.79□□□□□ -0.36
TRIM54-203ENST00000485306 CGB1A6NKQ9 187 aa12.79□□□□□ -0.36
TRIM54-203ENST00000485306 NPIPB5A8MRT5 1133 aa12.79□□□□□ -0.36
TRIM54-203ENST00000485306 WRBO00258 174 aa12.79□□□□□ -0.36
TRIM54-203ENST00000485306 SYNGR2O43760 224 aa12.79□□□□□ -0.36
TRIM54-203ENST00000485306 SAP30O75446 220 aa12.79□□□□□ -0.36
TRIM54-203ENST00000485306 SIX6O95475 246 aa12.79□□□□□ -0.36
TRIM54-203ENST00000485306 CXCL3P19876 107 aa12.79□□□□□ -0.36
TRIM54-203ENST00000485306 HOXA1P49639 335 aaPredicted RBP12.79□□□□□ -0.36
TRIM54-203ENST00000485306 SLURP1P55000 103 aa12.79□□□□□ -0.36
TRIM54-203ENST00000485306 ATP5IP56385 69 aaPredicted RBP12.79□□□□□ -0.36
TRIM54-203ENST00000485306 TTC9CQ8N5M4 171 aa12.79□□□□□ -0.36
TRIM54-203ENST00000485306 OR1L6Q8NGR2 347 aa12.79□□□□□ -0.36
TRIM54-203ENST00000485306 PRR25Q96S07 402 aa12.79□□□□□ -0.36
TRIM54-203ENST00000485306 HIPK2Q9H2X6 1198 aa12.79□□□□□ -0.36
TRIM54-203ENST00000485306 RANGRFQ9HD47 186 aaPredicted RBP12.79□□□□□ -0.36
TRIM54-203ENST00000485306 IGHV4OR15-8A0A075B7B6 117 aa12.78□□□□□ -0.36
TRIM54-203ENST00000485306 A0A087WW49 117 aa12.78□□□□□ -0.36
TRIM54-203ENST00000485306 A0A1B0GW64 132 aa12.78□□□□□ -0.36
TRIM54-203ENST00000485306 E7EUB6 86 aa12.78□□□□□ -0.36
TRIM54-203ENST00000485306 BRI3O95415 125 aa12.78□□□□□ -0.36
TRIM54-203ENST00000485306 MBPP02686 304 aaPredicted RBP12.78□□□□□ -0.36
TRIM54-203ENST00000485306 CRYGCP07315 174 aa12.78□□□□□ -0.36
TRIM54-203ENST00000485306 NOXA1Q86UR1 476 aa12.78□□□□□ -0.36
TRIM54-203ENST00000485306 OR2C3Q8N628 320 aa12.78□□□□□ -0.36
TRIM54-203ENST00000485306 DTD1Q8TEA8 209 aa12.78□□□□□ -0.36
TRIM54-203ENST00000485306 RAB40CQ96S21 281 aa12.78□□□□□ -0.36
TRIM54-203ENST00000485306 RBKSQ9H477 322 aa12.78□□□□□ -0.36
TRIM54-203ENST00000485306 CYB5BO43169 146 aa12.77□□□□□ -0.37
TRIM54-203ENST00000485306 SCGB1D2O95969 90 aa12.77□□□□□ -0.37
TRIM54-203ENST00000485306 RLN2P04090 185 aa12.77□□□□□ -0.37
TRIM54-203ENST00000485306 PET100P0DJ07 73 aa12.77□□□□□ -0.37
TRIM54-203ENST00000485306 APELAP0DMC3 54 aa12.77□□□□□ -0.37
TRIM54-203ENST00000485306 OR13C7P0DN81 318 aa12.77□□□□□ -0.37
TRIM54-203ENST00000485306 ZP3P21754 424 aa12.77□□□□□ -0.37
TRIM54-203ENST00000485306 PSMB6P28072 239 aa12.77□□□□□ -0.37
TRIM54-203ENST00000485306 RAP2BP61225 183 aa12.77□□□□□ -0.37
TRIM54-203ENST00000485306 FGL1Q08830 312 aa12.77□□□□□ -0.37
TRIM54-203ENST00000485306 ACSM6Q6P461 480 aa12.77□□□□□ -0.37
TRIM54-203ENST00000485306 ZNF114Q8NC26 417 aa12.77□□□□□ -0.37
TRIM54-203ENST00000485306 OR4C12Q96R67 309 aa12.77□□□□□ -0.37
TRIM54-203ENST00000485306 ELOVL1Q9BW60 279 aa12.77□□□□□ -0.37
TRIM54-203ENST00000485306 HEYLQ9NQ87 328 aaPredicted RBP12.77□□□□□ -0.37
TRIM54-203ENST00000485306 LSM4Q9Y4Z0 139 aaKnown RBP12.77□□□□□ -0.37
TRIM54-203ENST00000485306 U3KQ87 197 aa12.77□□□□□ -0.37
TRIM54-203ENST00000485306 SORL1Q92673 2214 aa12.76□□□□□ -0.37
TRIM54-203ENST00000485306 K7EPK0 472 aa12.76□□□□□ -0.37
TRIM54-203ENST00000485306 NHLRC4P0CG21 123 aaPredicted RBP12.76□□□□□ -0.37
TRIM54-203ENST00000485306 CTRB1P17538 263 aa12.76□□□□□ -0.37
TRIM54-203ENST00000485306 PVALBP20472 110 aaPredicted RBP12.76□□□□□ -0.37
TRIM54-203ENST00000485306 SNCAP37840 140 aa12.76□□□□□ -0.37
TRIM54-203ENST00000485306 HTR2BP41595 481 aa12.76□□□□□ -0.37
TRIM54-203ENST00000485306 BCAP31P51572 246 aa12.76□□□□□ -0.37
TRIM54-203ENST00000485306 SUB1P53999 127 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRIM54-203ENST00000485306 TAS2R30P59541 319 aa12.76□□□□□ -0.37
TRIM54-203ENST00000485306 POLR2GP62487 172 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRIM54-203ENST00000485306 RPP30P78346 268 aaKnown RBP12.76□□□□□ -0.37
TRIM54-203ENST00000485306 WT1-ASQ06250 92 aa12.76□□□□□ -0.37
TRIM54-203ENST00000485306 CTRB2Q6GPI1 263 aa12.76□□□□□ -0.37
TRIM54-203ENST00000485306 OR10W1Q8NGF6 305 aa12.76□□□□□ -0.37
TRIM54-203ENST00000485306 PPP1R1CQ8WVI7 109 aa12.76□□□□□ -0.37
TRIM54-203ENST00000485306 USMG5Q96IX5 58 aa12.76□□□□□ -0.37
TRIM54-203ENST00000485306 NXPH3O95157 252 aa12.75□□□□□ -0.37
TRIM54-203ENST00000485306 AREGP15514 252 aa12.75□□□□□ -0.37
TRIM54-203ENST00000485306 HIST1H1BP16401 226 aaKnown RBP12.75□□□□□ -0.37
TRIM54-203ENST00000485306 S100A10P60903 97 aa12.75□□□□□ -0.37
TRIM54-203ENST00000485306 RAB32Q13637 225 aa12.75□□□□□ -0.37
TRIM54-203ENST00000485306 KLK9Q2XQG4 91 aa12.75□□□□□ -0.37
TRIM54-203ENST00000485306 SPINK9Q5DT21 86 aa12.75□□□□□ -0.37
TRIM54-203ENST00000485306 OR1P1Q8NH06 330 aa12.75□□□□□ -0.37
TRIM54-203ENST00000485306 SMIM8Q96KF7 97 aa12.75□□□□□ -0.37
TRIM54-203ENST00000485306 MAGT1Q9H0U3 335 aa12.75□□□□□ -0.37
TRIM54-203ENST00000485306 KLK9Q9UKQ9 250 aa12.75□□□□□ -0.37
TRIM54-203ENST00000485306 hCG_2014768A0A024R1R8 64 aa12.74□□□□□ -0.37
TRIM54-203ENST00000485306 ANKRD34BA5PLL1 514 aa12.74□□□□□ -0.37
TRIM54-203ENST00000485306 L7N2F9 121 aa12.74□□□□□ -0.37
TRIM54-203ENST00000485306 VAMP2P63027 116 aa12.74□□□□□ -0.37
TRIM54-203ENST00000485306 BSXQ3C1V8 233 aa12.74□□□□□ -0.37
TRIM54-203ENST00000485306 SLC24A4Q8NFF2 622 aa12.74□□□□□ -0.37
TRIM54-203ENST00000485306 RCL1Q9Y2P8 373 aaKnown RBP12.74□□□□□ -0.37
TRIM54-203ENST00000485306 LSM5Q9Y4Y9 91 aaKnown RBP12.74□□□□□ -0.37
TRIM54-203ENST00000485306 F11RQ9Y624 299 aaKnown RBP12.74□□□□□ -0.37
TRIM54-203ENST00000485306 SMAD5-AS1Q9Y6J3 95 aa12.74□□□□□ -0.37
TRIM54-203ENST00000485306 A0A1B0GVG6 124 aa12.73□□□□□ -0.37
TRIM54-203ENST00000485306 E5RGE8 158 aa12.73□□□□□ -0.37
TRIM54-203ENST00000485306 CORTO00230 105 aa12.73□□□□□ -0.37
TRIM54-203ENST00000485306 SSSCA1O60232 199 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms