RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 NSUN5P1Q3KNT7 163 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 GLYATL3Q5SZD4 288 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 KDM4DQ6B0I6 523 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 CRIP3Q6Q6R5 217 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 Q8N2B8 174 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF491Q8N8L2 437 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 MAPK1IP1LQ8NDC0 245 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 OR8B3Q8NGG8 313 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 OR5A2Q8NGI9 324 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 RPS4Y2Q8TD47 263 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 SLAMF6Q96DU3 332 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 OR8B2Q96RD0 313 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 PLA2G12AQ9BZM1 189 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 VCXQ9H320 206 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 NUFIP1Q9UHK0 495 aaKnown RBP4.15□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF222Q9UK12 451 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 TMEM14AQ9Y6G1 99 aa4.15□□□□□ -1.74
CCDC39-205ENST00000485055 RIIAD1A6NNX1 92 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 SOCS2O14508 198 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 DHRS3O75911 302 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 FAM106CPP0CH98 169 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 PRTN3P24158 256 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 PRSS3P35030 304 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 CACNG7P62955 275 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 TAF9Q16594 264 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 CNPY1Q3B7I2 92 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 FAM106AQ4KMX7 169 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 CNIH2Q6PI25 160 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 OR10G2Q8NGC3 310 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 OR52E2Q8NGJ4 325 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 OR5K1Q8NHB7 308 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 ZNRF4Q8WWF5 429 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 RITA1Q96K30 269 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 C1orf147Q96MC9 270 aaPredicted RBP4.15□□□□□ -1.75
CCDC39-205ENST00000485055 FAAP24Q9BTP7 215 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 OR51E2Q9H255 320 aa4.15□□□□□ -1.75
CCDC39-205ENST00000485055 TEP1Q99973 2627 aaKnown RBP4.14□□□□□ -1.75
CCDC39-205ENST00000485055 LYNX1G3V0Z9 82 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 YIF1AO95070 293 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 EIF4EP06730 217 aaKnown RBP4.14□□□□□ -1.75
CCDC39-205ENST00000485055 LYNX1P0DP58 116 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 ZNF92Q03936 586 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 PMAIP1Q13794 54 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 NXNL2Q5VZ03 156 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 ZNF788Q6ZQV5 615 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 RFESDQ8TAC1 157 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 TP53RKQ96S44 253 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 PDCD10Q9BUL8 212 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 TSSK6Q9BXA6 273 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 OR51I2Q9H344 312 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 VAX2Q9UIW0 290 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 DSCAML1Q8TD84 2053 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 AKAP6Q13023 2319 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 CCDC168Q8NDH2 2452 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 SAA2-SAA4A0A096LPE2 208 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 DHRS12A0PJE2 317 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 FGF2P09038 288 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 AZU1P20160 251 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 SRP14P37108 136 aaKnown RBP4.14□□□□□ -1.75
CCDC39-205ENST00000485055 RAB5BP61020 215 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 MXD1Q05195 221 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 MEF2CQ06413 473 aaPredicted RBP4.14□□□□□ -1.75
CCDC39-205ENST00000485055 TMEM30BQ3MIR4 351 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 FA2HQ7L5A8 372 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 AMIGO2Q86SJ2 522 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 SAXO1Q8IYX7 474 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 FTMTQ8N4E7 242 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 OR4K13Q8NH42 304 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 ZNRF2Q8NHG8 242 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 BLNKQ8WV28 456 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 NDFIP1Q9BT67 221 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 LINC00574Q9H8X3 128 aa4.14□□□□□ -1.75
CCDC39-205ENST00000485055 HIVEP2P31629 2446 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 FBN1P35555 2871 aaKnown RBP4.13□□□□□ -1.75
CCDC39-205ENST00000485055 HSPE1P61604 102 aaKnown RBP4.13□□□□□ -1.75
CCDC39-205ENST00000485055 PKIAP61925 76 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 SNRPGP62308 76 aaKnown RBP4.13□□□□□ -1.75
CCDC39-205ENST00000485055 WDR86Q86TI4 376 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.13□□□□□ -1.75
CCDC39-205ENST00000485055 CANT1Q8WVQ1 401 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 CYGBQ8WWM9 190 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 LYZL4Q96KX0 146 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 PITX2Q99697 317 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 RTL8AQ9BWD3 113 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 SPG11Q96JI7 2443 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 USF3Q68DE3 2245 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 H7C1C5 153 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 SLC17A2O00624 439 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 GSC2O15499 205 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 TTRP02766 147 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 CSN2P05814 226 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 FGF6P10767 208 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 LCN6P62502 163 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 BTN1A1Q13410 526 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 KPRPQ5T749 579 aaPredicted RBP4.13□□□□□ -1.75
CCDC39-205ENST00000485055 RSBN1Q5VWQ0 802 aaPredicted RBP4.13□□□□□ -1.75
CCDC39-205ENST00000485055 OR2T2Q6IF00 324 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 TOMM20LQ6UXN7 152 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 Q6ZN92 141 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 GDPGP1Q6ZNW5 385 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms