RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 ADAMTSL5Q6ZMM2 481 aa12.33□□□□□ -0.44
DDR1-246ENST00000485023 GPHB5Q86YW7 130 aa12.33□□□□□ -0.44
DDR1-246ENST00000485023 LGI3Q8N145 548 aa12.33□□□□□ -0.44
DDR1-246ENST00000485023 CENPSQ8N2Z9 138 aa12.33□□□□□ -0.44
DDR1-246ENST00000485023 IL22RA2Q969J5 263 aa12.33□□□□□ -0.44
DDR1-246ENST00000485023 IZUMO1RA6ND01 250 aa12.32□□□□□ -0.44
DDR1-246ENST00000485023 NAP1L6A6NFF2 107 aa12.32□□□□□ -0.44
DDR1-246ENST00000485023 A6NHS1 94 aa12.32□□□□□ -0.44
DDR1-246ENST00000485023 C2orf70A6NJV1 201 aa12.32□□□□□ -0.44
DDR1-246ENST00000485023 CEBPZOSA8MTT3 80 aa12.32□□□□□ -0.44
DDR1-246ENST00000485023 F8W735 103 aaPredicted RBP12.32□□□□□ -0.44
DDR1-246ENST00000485023 I3L2K1 104 aa12.32□□□□□ -0.44
DDR1-246ENST00000485023 SULT1A3P0DMM9 295 aa12.32□□□□□ -0.44
DDR1-246ENST00000485023 SULT1A4P0DMN0 295 aa12.32□□□□□ -0.44
DDR1-246ENST00000485023 RNASE2P10153 161 aaKnown RBP12.32□□□□□ -0.44
DDR1-246ENST00000485023 FOLR2P14207 255 aa12.32□□□□□ -0.44
DDR1-246ENST00000485023 SPCS3P61009 180 aa12.32□□□□□ -0.44
DDR1-246ENST00000485023 SRPXP78539 464 aa12.32□□□□□ -0.44
DDR1-246ENST00000485023 ANKRD55Q3KP44 614 aa12.32□□□□□ -0.44
DDR1-246ENST00000485023 BSCL2Q96G97 398 aaPredicted RBP12.32□□□□□ -0.44
DDR1-246ENST00000485023 CHRDL1Q9BU40 450 aa12.32□□□□□ -0.44
DDR1-246ENST00000485023 HEYLQ9NQ87 328 aaPredicted RBP12.32□□□□□ -0.44
DDR1-246ENST00000485023 FLVCR2Q9UPI3 526 aa12.32□□□□□ -0.44
DDR1-246ENST00000485023 LSM4Q9Y4Z0 139 aaKnown RBP12.32□□□□□ -0.44
DDR1-246ENST00000485023 IGHV3OR16-8A0A075B7F1 116 aa12.31□□□□□ -0.44
DDR1-246ENST00000485023 A0A0B4J2A0 478 aa12.31□□□□□ -0.44
DDR1-246ENST00000485023 TMEM213A2RRL7 107 aa12.31□□□□□ -0.44
DDR1-246ENST00000485023 CENPXA8MT69 81 aa12.31□□□□□ -0.44
DDR1-246ENST00000485023 LGALS9O00182 355 aa12.31□□□□□ -0.44
DDR1-246ENST00000485023 NDUFB6O95139 128 aa12.31□□□□□ -0.44
DDR1-246ENST00000485023 BTCP35070 178 aa12.31□□□□□ -0.44
DDR1-246ENST00000485023 CD69Q07108 199 aa12.31□□□□□ -0.44
DDR1-246ENST00000485023 TM4SF20Q53R12 229 aa12.31□□□□□ -0.44
DDR1-246ENST00000485023 NMSQ5H8A3 153 aa12.31□□□□□ -0.44
DDR1-246ENST00000485023 SHPKQ9UHJ6 478 aa12.31□□□□□ -0.44
DDR1-246ENST00000485023 SFT2D2O95562 160 aa12.3□□□□□ -0.44
DDR1-246ENST00000485023 ADMP35318 185 aa12.3□□□□□ -0.44
DDR1-246ENST00000485023 SUB1P53999 127 aaKnown RBP eCLIP12.3□□□□□ -0.44
DDR1-246ENST00000485023 MFAP4P55083 255 aa12.3□□□□□ -0.44
DDR1-246ENST00000485023 DCTN2Q13561 401 aaKnown RBP12.3□□□□□ -0.44
DDR1-246ENST00000485023 SMCO1Q147U7 214 aa12.3□□□□□ -0.44
DDR1-246ENST00000485023 CD300EQ496F6 205 aaPredicted RBP12.3□□□□□ -0.44
DDR1-246ENST00000485023 AARDQ4LEZ3 155 aa12.3□□□□□ -0.44
DDR1-246ENST00000485023 LCN12Q6JVE5 192 aa12.3□□□□□ -0.44
DDR1-246ENST00000485023 C20orf24Q9BUV8 137 aa12.3□□□□□ -0.44
DDR1-246ENST00000485023 SIGLEC8Q9NYZ4 499 aa12.3□□□□□ -0.44
DDR1-246ENST00000485023 A8MWP6 167 aa12.29□□□□□ -0.44
DDR1-246ENST00000485023 INS-IGF2F8WCM5 200 aa12.29□□□□□ -0.44
DDR1-246ENST00000485023 ZNF207O43670 478 aaKnown RBP12.29□□□□□ -0.44
DDR1-246ENST00000485023 ANXA7P20073 488 aaKnown RBP12.29□□□□□ -0.44
DDR1-246ENST00000485023 CBLN1P23435 193 aa12.29□□□□□ -0.44
DDR1-246ENST00000485023 UXS1Q8NBZ7 420 aa12.29□□□□□ -0.44
DDR1-246ENST00000485023 OR52E5Q8NH55 327 aa12.29□□□□□ -0.44
DDR1-246ENST00000485023 OR1S1Q8NH92 325 aa12.29□□□□□ -0.44
DDR1-246ENST00000485023 C7orf50Q9BRJ6 194 aaKnown RBP12.29□□□□□ -0.44
DDR1-246ENST00000485023 SMAD5-AS1Q9Y6J3 95 aa12.29□□□□□ -0.44
DDR1-246ENST00000485023 DNAH9Q9NYC9 4486 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 PLA2G10O15496 165 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 GNG7O60262 68 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 HOXB5P09067 269 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 OPRK1P41145 380 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 TNFRSF9Q07011 255 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 GUCA2BQ16661 112 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 SPSB3Q6PJ21 355 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 BTNL8Q6UX41 500 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 SLC24A4Q8NFF2 622 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 TMEM190Q8WZ59 177 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 ASCL2Q99929 193 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 B9D2Q9BPU9 175 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 ZNF436Q9C0F3 470 aaPredicted RBP12.28□□□□□ -0.44
DDR1-246ENST00000485023 RBKSQ9H477 322 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 PALMDQ9NP74 551 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 MLXQ9UH92 298 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 UFC1Q9Y3C8 167 aa12.28□□□□□ -0.44
DDR1-246ENST00000485023 NUPL2O15504 423 aaKnown RBP12.27□□□□□ -0.45
DDR1-246ENST00000485023 LYRM1O43325 122 aa12.27□□□□□ -0.45
DDR1-246ENST00000485023 CTSGP08311 255 aa12.27□□□□□ -0.45
DDR1-246ENST00000485023 HTR2BP41595 481 aa12.27□□□□□ -0.45
DDR1-246ENST00000485023 MLANAQ16655 118 aa12.27□□□□□ -0.45
DDR1-246ENST00000485023 DEFB114Q30KQ6 69 aa12.27□□□□□ -0.45
DDR1-246ENST00000485023 WDR89Q96FK6 387 aaPredicted RBP12.27□□□□□ -0.45
DDR1-246ENST00000485023 MRPL36Q9P0J6 103 aaKnown RBP12.27□□□□□ -0.45
DDR1-246ENST00000485023 DUXBA0A1W2PPF3 345 aa12.26□□□□□ -0.45
DDR1-246ENST00000485023 C9orf170A2RU37 121 aa12.26□□□□□ -0.45
DDR1-246ENST00000485023 CORTO00230 105 aa12.26□□□□□ -0.45
DDR1-246ENST00000485023 NDUFA4O00483 81 aa12.26□□□□□ -0.45
DDR1-246ENST00000485023 YIF1AO95070 293 aa12.26□□□□□ -0.45
DDR1-246ENST00000485023 BSXQ3C1V8 233 aa12.26□□□□□ -0.45
DDR1-246ENST00000485023 C4orf46Q504U0 113 aa12.26□□□□□ -0.45
DDR1-246ENST00000485023 PVRIGQ6DKI7 326 aa12.26□□□□□ -0.45
DDR1-246ENST00000485023 LRTM2Q8N967 370 aa12.26□□□□□ -0.45
DDR1-246ENST00000485023 DUSP18Q8NEJ0 188 aa12.26□□□□□ -0.45
DDR1-246ENST00000485023 DTD1Q8TEA8 209 aa12.26□□□□□ -0.45
DDR1-246ENST00000485023 CCDC32Q9BV29 185 aa12.26□□□□□ -0.45
DDR1-246ENST00000485023 C20orf85Q9H1P6 137 aa12.26□□□□□ -0.45
DDR1-246ENST00000485023 HIPK2Q9H2X6 1198 aa12.26□□□□□ -0.45
DDR1-246ENST00000485023 FNDC4Q9H6D8 234 aaPredicted RBP12.26□□□□□ -0.45
DDR1-246ENST00000485023 GAR1Q9NY12 217 aaKnown RBP12.26□□□□□ -0.45
DDR1-246ENST00000485023 PTTG2Q9NZH5 202 aa12.26□□□□□ -0.45
DDR1-246ENST00000485023 HSPB7Q9UBY9 170 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms