RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 BSCL2Q96G97 398 aaPredicted RBP9.26□□□□□ -0.93
MSH5-216ENST00000484309 WWC2-AS2Q96NR7 200 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 PDCD10Q9BUL8 212 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 C20orf24Q9BUV8 137 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 ZNF436Q9C0F3 470 aaPredicted RBP9.26□□□□□ -0.93
MSH5-216ENST00000484309 SCP2D1Q9UJQ7 156 aa9.26□□□□□ -0.93
MSH5-216ENST00000484309 I3L2K1 104 aa9.25□□□□□ -0.93
MSH5-216ENST00000484309 SCAF4O95104 1147 aaKnown RBP9.25□□□□□ -0.93
MSH5-216ENST00000484309 NXPH3O95157 252 aa9.25□□□□□ -0.93
MSH5-216ENST00000484309 CDS2O95674 445 aa9.25□□□□□ -0.93
MSH5-216ENST00000484309 AKR1C4P17516 323 aa9.25□□□□□ -0.93
MSH5-216ENST00000484309 KLF9Q13886 244 aaPredicted RBP9.25□□□□□ -0.93
MSH5-216ENST00000484309 ZNF57Q68EA5 555 aaPredicted RBP9.25□□□□□ -0.93
MSH5-216ENST00000484309 ZNF114Q8NC26 417 aa9.25□□□□□ -0.93
MSH5-216ENST00000484309 RBPMSQ93062 196 aaKnown RBP9.25□□□□□ -0.93
MSH5-216ENST00000484309 TRIM63Q969Q1 353 aa9.25□□□□□ -0.93
MSH5-216ENST00000484309 RCHY1Q96PM5 261 aa9.25□□□□□ -0.93
MSH5-216ENST00000484309 NEURL2Q9BR09 285 aa9.25□□□□□ -0.93
MSH5-216ENST00000484309 TUBA4BQ9H853 241 aa9.25□□□□□ -0.93
MSH5-216ENST00000484309 PALMDQ9NP74 551 aa9.25□□□□□ -0.93
MSH5-216ENST00000484309 C19orf73Q9NVV2 129 aa9.25□□□□□ -0.93
MSH5-216ENST00000484309 SLC2A8Q9NY64 477 aa9.25□□□□□ -0.93
MSH5-216ENST00000484309 TECRQ9NZ01 308 aaKnown RBP9.25□□□□□ -0.93
MSH5-216ENST00000484309 UFC1Q9Y3C8 167 aa9.25□□□□□ -0.93
MSH5-216ENST00000484309 B3GALNT1O75752 331 aa9.24□□□□□ -0.93
MSH5-216ENST00000484309 SNCAP37840 140 aa9.24□□□□□ -0.93
MSH5-216ENST00000484309 DHODHQ02127 395 aa9.24□□□□□ -0.93
MSH5-216ENST00000484309 SPSB3Q6PJ21 355 aa9.24□□□□□ -0.93
MSH5-216ENST00000484309 CCDC190Q86UF4 302 aa9.24□□□□□ -0.93
MSH5-216ENST00000484309 TOMM5Q8N4H5 51 aa9.24□□□□□ -0.93
MSH5-216ENST00000484309 DEFB125Q8N687 156 aa9.24□□□□□ -0.93
MSH5-216ENST00000484309 GPR146Q96CH1 333 aa9.24□□□□□ -0.93
MSH5-216ENST00000484309 ENY2Q9NPA8 101 aa9.24□□□□□ -0.93
MSH5-216ENST00000484309 CACNG5Q9UF02 275 aa9.24□□□□□ -0.93
MSH5-216ENST00000484309 A8MZ25 164 aa9.23□□□□□ -0.93
MSH5-216ENST00000484309 NDUFA4O00483 81 aa9.23□□□□□ -0.93
MSH5-216ENST00000484309 CTSGP08311 255 aa9.23□□□□□ -0.93
MSH5-216ENST00000484309 RNASE2P10153 161 aaKnown RBP9.23□□□□□ -0.93
MSH5-216ENST00000484309 MFAP4P55083 255 aa9.23□□□□□ -0.93
MSH5-216ENST00000484309 TMEM187Q14656 261 aa9.23□□□□□ -0.93
MSH5-216ENST00000484309 TMED4Q7Z7H5 227 aa9.23□□□□□ -0.93
MSH5-216ENST00000484309 ZNF414Q96IQ9 312 aa9.23□□□□□ -0.93
MSH5-216ENST00000484309 ZMAT4Q9H898 229 aa9.23□□□□□ -0.93
MSH5-216ENST00000484309 MRPL27Q9P0M9 148 aaKnown RBP9.23□□□□□ -0.93
MSH5-216ENST00000484309 IGHV3-49A0A0A0MS15 119 aa9.22□□□□□ -0.93
MSH5-216ENST00000484309 ZNF701M0R085 212 aaPredicted RBP9.22□□□□□ -0.93
MSH5-216ENST00000484309 NUPL2O15504 423 aaKnown RBP9.22□□□□□ -0.93
MSH5-216ENST00000484309 GNG7O60262 68 aa9.22□□□□□ -0.93
MSH5-216ENST00000484309 YIF1AO95070 293 aa9.22□□□□□ -0.93
MSH5-216ENST00000484309 C8orf88P0DMB2 117 aa9.22□□□□□ -0.93
MSH5-216ENST00000484309 FAUP35544 74 aaKnown RBP9.22□□□□□ -0.93
MSH5-216ENST00000484309 ELLP55199 621 aaPredicted RBP9.22□□□□□ -0.93
MSH5-216ENST00000484309 SUPT4H1P63272 117 aaKnown RBP9.22□□□□□ -0.93
MSH5-216ENST00000484309 HAGHQ16775 308 aa9.22□□□□□ -0.93
MSH5-216ENST00000484309 RBPMS2Q6ZRY4 209 aaKnown RBP9.22□□□□□ -0.93
MSH5-216ENST00000484309 FAM219AQ8IW50 185 aa9.22□□□□□ -0.93
MSH5-216ENST00000484309 OR52B4Q8NGK2 314 aa9.22□□□□□ -0.93
MSH5-216ENST00000484309 MARC2Q969Z3 335 aa9.22□□□□□ -0.93
MSH5-216ENST00000484309 SCGB3A2Q96PL1 93 aa9.22□□□□□ -0.93
MSH5-216ENST00000484309 SRD5A3Q9H8P0 318 aa9.22□□□□□ -0.93
MSH5-216ENST00000484309 DAZ1Q9NQZ3 744 aaKnown RBP9.22□□□□□ -0.93
MSH5-216ENST00000484309 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.22□□□□□ -0.93
MSH5-216ENST00000484309 KCNIP3Q9Y2W7 256 aa9.22□□□□□ -0.93
MSH5-216ENST00000484309 TMEM56-RWDD3S4R434 201 aa9.22□□□□□ -0.93
MSH5-216ENST00000484309 IGHV3OR16-13A0A075B7E8 117 aa9.21□□□□□ -0.94
MSH5-216ENST00000484309 IGHV3-74A0A0B4J1X5 117 aa9.21□□□□□ -0.94
MSH5-216ENST00000484309 CEBPZOSA8MTT3 80 aa9.21□□□□□ -0.94
MSH5-216ENST00000484309 OR11H12B2RN74 326 aa9.21□□□□□ -0.94
MSH5-216ENST00000484309 AP3S2P59780 193 aa9.21□□□□□ -0.94
MSH5-216ENST00000484309 SPCS3P61009 180 aa9.21□□□□□ -0.94
MSH5-216ENST00000484309 MLANAQ16655 118 aa9.21□□□□□ -0.94
MSH5-216ENST00000484309 SPANXN2Q5MJ10 180 aa9.21□□□□□ -0.94
MSH5-216ENST00000484309 LYZL2Q7Z4W2 148 aa9.21□□□□□ -0.94
MSH5-216ENST00000484309 GALNT14Q96FL9 552 aa9.21□□□□□ -0.94
MSH5-216ENST00000484309 ATP6V0BQ99437 205 aa9.21□□□□□ -0.94
MSH5-216ENST00000484309 TM2D3Q9BRN9 247 aa9.21□□□□□ -0.94
MSH5-216ENST00000484309 SRRQ9GZT4 340 aa9.21□□□□□ -0.94
MSH5-216ENST00000484309 RETNQ9HD89 108 aa9.21□□□□□ -0.94
MSH5-216ENST00000484309 HEYLQ9NQ87 328 aaPredicted RBP9.21□□□□□ -0.94
MSH5-216ENST00000484309 GAR1Q9NY12 217 aaKnown RBP9.21□□□□□ -0.94
MSH5-216ENST00000484309 MRPL36Q9P0J6 103 aaKnown RBP9.21□□□□□ -0.94
MSH5-216ENST00000484309 INS-IGF2F8WCM5 200 aa9.2□□□□□ -0.94
MSH5-216ENST00000484309 SULT1A3P0DMM9 295 aa9.2□□□□□ -0.94
MSH5-216ENST00000484309 SULT1A4P0DMN0 295 aa9.2□□□□□ -0.94
MSH5-216ENST00000484309 OPRK1P41145 380 aa9.2□□□□□ -0.94
MSH5-216ENST00000484309 SUB1P53999 127 aaKnown RBP eCLIP9.2□□□□□ -0.942e-7■■□□□ 14.2
MSH5-216ENST00000484309 RELQ04864 619 aaPredicted RBP9.2□□□□□ -0.94
MSH5-216ENST00000484309 SLC16A13Q7RTY0 426 aa9.2□□□□□ -0.94
MSH5-216ENST00000484309 DUSP18Q8NEJ0 188 aa9.2□□□□□ -0.94
MSH5-216ENST00000484309 TXN2Q99757 166 aa9.2□□□□□ -0.94
MSH5-216ENST00000484309 FNDC4Q9H6D8 234 aaPredicted RBP9.2□□□□□ -0.94
MSH5-216ENST00000484309 UBQLN2Q9UHD9 624 aa9.2□□□□□ -0.94
MSH5-216ENST00000484309 NBEAL2Q6ZNJ1 2754 aa9.19□□□□□ -0.94
MSH5-216ENST00000484309 LINC00854A0A1B0GVQ3 168 aa9.19□□□□□ -0.94
MSH5-216ENST00000484309 RBMY1BA6NDE4 496 aaKnown RBP9.19□□□□□ -0.94
MSH5-216ENST00000484309 RBMY1EA6NEQ0 496 aaKnown RBP9.19□□□□□ -0.94
MSH5-216ENST00000484309 RBMY1DP0C7P1 496 aaKnown RBP9.19□□□□□ -0.94
MSH5-216ENST00000484309 ANXA3P12429 323 aa9.19□□□□□ -0.94
MSH5-216ENST00000484309 VAMP1P23763 118 aa9.19□□□□□ -0.94
MSH5-216ENST00000484309 FCGR2BP31994 310 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms