RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 ZNF846Q147U1 533 aa14.32□□□□□ -0.12
NDUFA3-213ENST00000484103 BAK1Q16611 211 aa14.32□□□□□ -0.12
NDUFA3-213ENST00000484103 SLC38A6Q8IZM9 456 aa14.32□□□□□ -0.12
NDUFA3-213ENST00000484103 TMEM229BQ8NBD8 167 aa14.32□□□□□ -0.12
NDUFA3-213ENST00000484103 OR5B3Q8NH48 314 aa14.32□□□□□ -0.12
NDUFA3-213ENST00000484103 TSC22D3Q99576 134 aa14.32□□□□□ -0.12
NDUFA3-213ENST00000484103 TMEM14BQ9NUH8 114 aa14.32□□□□□ -0.12
NDUFA3-213ENST00000484103 FKBP11Q9NYL4 201 aa14.32□□□□□ -0.12
NDUFA3-213ENST00000484103 IGHV3OR16-13A0A075B7E8 117 aa14.31□□□□□ -0.12
NDUFA3-213ENST00000484103 IGHV3-74A0A0B4J1X5 117 aa14.31□□□□□ -0.12
NDUFA3-213ENST00000484103 ANKRD20A5PA0PJZ0 165 aa14.31□□□□□ -0.12
NDUFA3-213ENST00000484103 NDUFA4O00483 81 aa14.31□□□□□ -0.12
NDUFA3-213ENST00000484103 CD74P04233 296 aa14.31□□□□□ -0.12
NDUFA3-213ENST00000484103 RPL35AP18077 110 aaKnown RBP14.31□□□□□ -0.12
NDUFA3-213ENST00000484103 TBPP20226 339 aa14.31□□□□□ -0.12
NDUFA3-213ENST00000484103 ELLP55199 621 aaPredicted RBP14.31□□□□□ -0.12
NDUFA3-213ENST00000484103 PMS2P11Q13670 270 aa14.31□□□□□ -0.12
NDUFA3-213ENST00000484103 SEC22AQ96IW7 307 aa14.31□□□□□ -0.12
NDUFA3-213ENST00000484103 OVOL2Q9BRP0 275 aa14.31□□□□□ -0.12
NDUFA3-213ENST00000484103 CCDC32Q9BV29 185 aa14.31□□□□□ -0.12
NDUFA3-213ENST00000484103 C5orf66Q9H5L9 145 aa14.31□□□□□ -0.12
NDUFA3-213ENST00000484103 TRAV25A0A0B4J276 109 aa14.3□□□□□ -0.12
NDUFA3-213ENST00000484103 CTSDP07339 412 aaPredicted RBP14.3□□□□□ -0.12
NDUFA3-213ENST00000484103 TAS2R19P59542 299 aa14.3□□□□□ -0.12
NDUFA3-213ENST00000484103 KLF9Q13886 244 aaPredicted RBP14.3□□□□□ -0.12
NDUFA3-213ENST00000484103 LAMTOR1Q6IAA8 161 aa14.3□□□□□ -0.12
NDUFA3-213ENST00000484103 SPSB3Q6PJ21 355 aa14.3□□□□□ -0.12
NDUFA3-213ENST00000484103 SPAG8Q99932 426 aaPredicted RBP14.3□□□□□ -0.12
NDUFA3-213ENST00000484103 DNAH1Q9P2D7 4330 aa14.29□□□□□ -0.12
NDUFA3-213ENST00000484103 NUPL2O15504 423 aaKnown RBP14.29□□□□□ -0.12
NDUFA3-213ENST00000484103 MT-CO2P00403 227 aa14.29□□□□□ -0.12
NDUFA3-213ENST00000484103 CD3DP04234 171 aa14.29□□□□□ -0.12
NDUFA3-213ENST00000484103 IL7P13232 177 aa14.29□□□□□ -0.12
NDUFA3-213ENST00000484103 DEFB135Q30KP9 77 aa14.29□□□□□ -0.12
NDUFA3-213ENST00000484103 RNASE10Q5GAN6 216 aaKnown RBP14.29□□□□□ -0.12
NDUFA3-213ENST00000484103 OR1P1Q8NH06 330 aa14.29□□□□□ -0.12
NDUFA3-213ENST00000484103 IL17DQ8TAD2 202 aa14.29□□□□□ -0.12
NDUFA3-213ENST00000484103 TSPAN4O14817 238 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 JTBO76095 146 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 CTSGP08311 255 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 AKR1C2P52895 323 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 PIGPP57054 158 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 EPPK1P58107 5090 aaKnown RBP14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 ZNF124Q15973 351 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 ODF3L2Q3SX64 289 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 SP6Q3SY56 376 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 SCGB2B2Q4G0G5 96 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 STEAP1BQ6NZ63 245 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 APRG1Q8IVJ8 170 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 GBGT1Q8N5D6 347 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 OR4D10Q8NGI6 311 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 DEDD2Q8WXF8 326 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 TP53RKQ96S44 253 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 RNF2Q99496 336 aa14.28□□□□□ -0.12
NDUFA3-213ENST00000484103 A0A0J9YWU9 116 aa14.27□□□□□ -0.13
NDUFA3-213ENST00000484103 I3L2K1 104 aa14.27□□□□□ -0.13
NDUFA3-213ENST00000484103 MFAP4P55083 255 aa14.27□□□□□ -0.13
NDUFA3-213ENST00000484103 UCP3P55916 312 aa14.27□□□□□ -0.13
NDUFA3-213ENST00000484103 PRCDQ00LT1 54 aa14.27□□□□□ -0.13
NDUFA3-213ENST00000484103 TRIM16LQ309B1 348 aa14.27□□□□□ -0.13
NDUFA3-213ENST00000484103 TRIQKQ629K1 86 aa14.27□□□□□ -0.13
NDUFA3-213ENST00000484103 IGHV3-66A0A0C4DH42 116 aa14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 CXorf65A6NEN9 183 aa14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 GNG7O60262 68 aa14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 IFNA17P01571 189 aa14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 IGKV1-5P01602 117 aa14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 AKAIN1P0CW23 69 aa14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 APOC4P55056 127 aa14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 AP3S2P59780 193 aa14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 HSPE1P61604 102 aaKnown RBP14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 ERHP84090 104 aaKnown RBP14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 RELQ04864 619 aaPredicted RBP14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 FAAP20Q6NZ36 180 aa14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 TOMM5Q8N4H5 51 aa14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 SLC35G3Q8N808 338 aa14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 TMEM116Q8NCL8 245 aa14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 OR4C16Q8NGL9 310 aa14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 RNASE11Q8TAA1 199 aaKnown RBP14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 RHPN1-AS1Q9BWJ2 59 aa14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 SMPXQ9UHP9 88 aa14.26□□□□□ -0.13
NDUFA3-213ENST00000484103 IGHV7-4-1A0A0J9YVY3 117 aa14.25□□□□□ -0.13
NDUFA3-213ENST00000484103 OR4C46A6NHA9 309 aa14.25□□□□□ -0.13
NDUFA3-213ENST00000484103 C15orf62A8K5M9 175 aa14.25□□□□□ -0.13
NDUFA3-213ENST00000484103 RAB3DO95716 219 aa14.25□□□□□ -0.13
NDUFA3-213ENST00000484103 EWSR1Q01844 656 aaKnown RBP eCLIP14.25□□□□□ -0.13
NDUFA3-213ENST00000484103 MEF2DQ14814 521 aa14.25□□□□□ -0.13
NDUFA3-213ENST00000484103 WFDC3Q8IUB2 231 aa14.25□□□□□ -0.13
NDUFA3-213ENST00000484103 ARRDC1Q8N5I2 433 aa14.25□□□□□ -0.13
NDUFA3-213ENST00000484103 ZNF414Q96IQ9 312 aa14.25□□□□□ -0.13
NDUFA3-213ENST00000484103 C3orf85A0A1B0GTC6 90 aa14.24□□□□□ -0.13
NDUFA3-213ENST00000484103 K7EMT4 169 aa14.24□□□□□ -0.13
NDUFA3-213ENST00000484103 CHEK1O14757 476 aa14.24□□□□□ -0.13
NDUFA3-213ENST00000484103 ST8SIA3O43173 380 aa14.24□□□□□ -0.13
NDUFA3-213ENST00000484103 SPRY2O43597 315 aa14.24□□□□□ -0.13
NDUFA3-213ENST00000484103 UPK1BO75841 260 aa14.24□□□□□ -0.13
NDUFA3-213ENST00000484103 HOXA1P49639 335 aaPredicted RBP14.24□□□□□ -0.13
NDUFA3-213ENST00000484103 LHFPL1Q86WI0 220 aa14.24□□□□□ -0.13
NDUFA3-213ENST00000484103 CADM3Q8N126 398 aa14.24□□□□□ -0.13
NDUFA3-213ENST00000484103 FAM212BQ9NTI7 297 aaPredicted RBP14.24□□□□□ -0.13
NDUFA3-213ENST00000484103 COPZ2Q9P299 210 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms