RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	IGLV11-55	A0A075B6I3	123 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	INS-IGF2	F8WCM5	200 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	CCL24	O00175	119 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	CCS	O14618	274 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	NDUFB8	O95169	186 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	SIX6	O95475	246 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	IFNA17	P01571	189 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	SLC25A6	P12236	298 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	H2BFS	P57053	126 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	TPPP2	P59282	170 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	SPCS3	P61009	180 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	TMEM65	Q6PI78	240 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	C9orf62	Q8N4C0	152 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	RAX2	Q96IS3	184 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	UBE2E2	Q96LR5	201 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	WWC2-AS2	Q96NR7	200 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	SLA2	Q9H6Q3	261 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882	HSPB7	Q9UBY9	170 aa		11.5	□□□□□ -0.57
NR1H3-222	ENST00000483882		I3L521	148 aa		11.49	□□□□□ -0.57
NR1H3-222	ENST00000483882	OR2J3	O76001	311 aa		11.49	□□□□□ -0.57
NR1H3-222	ENST00000483882	RHOG	P84095	191 aa		11.49	□□□□□ -0.57
NR1H3-222	ENST00000483882	TNFRSF9	Q07011	255 aa		11.49	□□□□□ -0.57
NR1H3-222	ENST00000483882	DEFB136	Q30KP8	78 aa		11.49	□□□□□ -0.57
NR1H3-222	ENST00000483882	LAMTOR1	Q6IAA8	161 aa		11.49	□□□□□ -0.57
NR1H3-222	ENST00000483882	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.49	□□□□□ -0.57
NR1H3-222	ENST00000483882	OR11H4	Q8NGC9	324 aa		11.49	□□□□□ -0.57
NR1H3-222	ENST00000483882	OR5B12	Q96R08	314 aa		11.49	□□□□□ -0.57
NR1H3-222	ENST00000483882	F11R	Q9Y624	299 aa	Known RBP	11.49	□□□□□ -0.57
NR1H3-222	ENST00000483882	PIGBOS1	A0A0B4J2F0	54 aa		11.48	□□□□□ -0.57
NR1H3-222	ENST00000483882	IGHV3-11	P01762	117 aa		11.48	□□□□□ -0.57
NR1H3-222	ENST00000483882	BSX	Q3C1V8	233 aa		11.48	□□□□□ -0.57
NR1H3-222	ENST00000483882	PVRIG	Q6DKI7	326 aa		11.48	□□□□□ -0.57
NR1H3-222	ENST00000483882	OR4D5	Q8NGN0	318 aa		11.48	□□□□□ -0.57
NR1H3-222	ENST00000483882	OR1S1	Q8NH92	325 aa		11.48	□□□□□ -0.57
NR1H3-222	ENST00000483882	TMEM170A	Q8WVE7	144 aa		11.48	□□□□□ -0.57
NR1H3-222	ENST00000483882	C4orf3	Q8WVX3	66 aa		11.48	□□□□□ -0.57
NR1H3-222	ENST00000483882	RBKS	Q9H477	322 aa		11.48	□□□□□ -0.57
NR1H3-222	ENST00000483882	PLEKHA3	Q9HB20	300 aa		11.48	□□□□□ -0.57
NR1H3-222	ENST00000483882	BOLA1	Q9Y3E2	137 aa		11.48	□□□□□ -0.57
NR1H3-222	ENST00000483882	RGS13	O14921	159 aa		11.47	□□□□□ -0.57
NR1H3-222	ENST00000483882	RNASE2	P10153	161 aa	Known RBP	11.47	□□□□□ -0.57
NR1H3-222	ENST00000483882	RUNX1	Q01196	453 aa		11.47	□□□□□ -0.57
NR1H3-222	ENST00000483882	IFITM2	Q01629	132 aa		11.47	□□□□□ -0.57
NR1H3-222	ENST00000483882	ID3	Q02535	119 aa		11.47	□□□□□ -0.57
NR1H3-222	ENST00000483882	ZNF114	Q8NC26	417 aa		11.47	□□□□□ -0.57
NR1H3-222	ENST00000483882	NECAP1	Q8NC96	275 aa		11.47	□□□□□ -0.57
NR1H3-222	ENST00000483882	PDCD10	Q9BUL8	212 aa		11.47	□□□□□ -0.57
NR1H3-222	ENST00000483882	FBXL7	Q9UJT9	491 aa		11.47	□□□□□ -0.57
NR1H3-222	ENST00000483882	HSPB11	Q9Y547	144 aa		11.47	□□□□□ -0.57
NR1H3-222	ENST00000483882		S4R3C0	116 aa		11.47	□□□□□ -0.57
NR1H3-222	ENST00000483882	DNAH9	Q9NYC9	4486 aa		11.47	□□□□□ -0.57
NR1H3-222	ENST00000483882	FAM223B	A6NKX1	122 aa		11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882	CEBPZOS	A8MTT3	80 aa		11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882	IFNA21	P01568	189 aa		11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882	HOXA1	P49639	335 aa	Predicted RBP	11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882	IAH1	Q2TAA2	248 aa	Predicted RBP	11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882		Q5BKY6	102 aa		11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882	C9orf66	Q5T8R8	295 aa		11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882	SLC25A24	Q6NUK1	477 aa		11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882	ZNF343	Q6P1L6	599 aa		11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882	GSG1L	Q6UXU4	331 aa		11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882	FAM223A	Q8IWN6	122 aa		11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882	OR1P1	Q8NH06	330 aa		11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882	WDR89	Q96FK6	387 aa	Predicted RBP	11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882	USMG5	Q96IX5	58 aa		11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882	PRR25	Q96S07	402 aa		11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882	MAGT1	Q9H0U3	335 aa		11.46	□□□□□ -0.57
NR1H3-222	ENST00000483882	MFSD2B	A6NFX1	497 aa		11.45	□□□□□ -0.58
NR1H3-222	ENST00000483882	HMSD	A8MTL9	139 aa		11.45	□□□□□ -0.58
NR1H3-222	ENST00000483882	FAM90A26	D6RGX4	464 aa		11.45	□□□□□ -0.58
NR1H3-222	ENST00000483882		K7EIM0	57 aa		11.45	□□□□□ -0.58
NR1H3-222	ENST00000483882	TRBV12-3	P01733	135 aa		11.45	□□□□□ -0.58
NR1H3-222	ENST00000483882	LGALS1	P09382	135 aa	Known RBP	11.45	□□□□□ -0.58
NR1H3-222	ENST00000483882	DEFA4	P12838	97 aa		11.45	□□□□□ -0.58
NR1H3-222	ENST00000483882	ERH	P84090	104 aa	Known RBP	11.45	□□□□□ -0.58
NR1H3-222	ENST00000483882	ATP5G2	Q06055	141 aa		11.45	□□□□□ -0.58
NR1H3-222	ENST00000483882	FGL1	Q08830	312 aa		11.45	□□□□□ -0.58
NR1H3-222	ENST00000483882	IL15RA	Q13261	267 aa		11.45	□□□□□ -0.58
NR1H3-222	ENST00000483882	C15orf32	Q32M92	178 aa		11.45	□□□□□ -0.58
NR1H3-222	ENST00000483882	DTD1	Q8TEA8	209 aa		11.45	□□□□□ -0.58
NR1H3-222	ENST00000483882	CCDC140	Q96MF4	163 aa		11.45	□□□□□ -0.58
NR1H3-222	ENST00000483882	PAIP2B	Q9ULR5	123 aa	Known RBP	11.45	□□□□□ -0.58
NR1H3-222	ENST00000483882	NBEAL2	Q6ZNJ1	2754 aa		11.44	□□□□□ -0.58
NR1H3-222	ENST00000483882	IGHV4OR15-8	A0A075B7B6	117 aa		11.44	□□□□□ -0.58
NR1H3-222	ENST00000483882		A0A087WW49	117 aa		11.44	□□□□□ -0.58
NR1H3-222	ENST00000483882	C13orf42	A0A1B0GVH6	325 aa		11.44	□□□□□ -0.58
NR1H3-222	ENST00000483882	SEC14L6	B5MCN3	397 aa		11.44	□□□□□ -0.58
NR1H3-222	ENST00000483882		I3L2K1	104 aa		11.44	□□□□□ -0.58
NR1H3-222	ENST00000483882	IGHV3-23	P01764	117 aa		11.44	□□□□□ -0.58
NR1H3-222	ENST00000483882	NHLRC4	P0CG21	123 aa	Predicted RBP	11.44	□□□□□ -0.58
NR1H3-222	ENST00000483882	HIST1H1B	P16401	226 aa	Known RBP	11.44	□□□□□ -0.58
NR1H3-222	ENST00000483882	FHL3	Q13643	280 aa		11.44	□□□□□ -0.58
NR1H3-222	ENST00000483882	NMES1	Q9C002	83 aa		11.44	□□□□□ -0.58
NR1H3-222	ENST00000483882	HEYL	Q9NQ87	328 aa	Predicted RBP	11.44	□□□□□ -0.58
NR1H3-222	ENST00000483882		U3KQK5	164 aa		11.44	□□□□□ -0.58
NR1H3-222	ENST00000483882	KMT2C	Q8NEZ4	4911 aa	Known RBP	11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	TRAV14DV4	A0A0A6YYC5	116 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	IGHV3-21	A0A0B4J1V1	117 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882		A0A0G2JLM5	398 aa		11.43	□□□□□ -0.58
NR1H3-222	ENST00000483882	C5orf51	A6NDU8	294 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms