RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 IGHV4-38-2P0DP08 117 aa13.79□□□□□ -0.2
MRPL28-210ENST00000483764 OPRK1P41145 380 aa13.79□□□□□ -0.2
MRPL28-210ENST00000483764 HSPE1P61604 102 aaKnown RBP13.79□□□□□ -0.2
MRPL28-210ENST00000483764 NOTCH2Q04721 2471 aa13.79□□□□□ -0.2
MRPL28-210ENST00000483764 RAB31Q13636 194 aa13.79□□□□□ -0.2
MRPL28-210ENST00000483764 FFAR4Q5NUL3 377 aa13.79□□□□□ -0.2
MRPL28-210ENST00000483764 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.79□□□□□ -0.22e-7■■□□□ 14.2
MRPL28-210ENST00000483764 PDPNQ86YL7 162 aa13.79□□□□□ -0.2
MRPL28-210ENST00000483764 RPP25LQ8N5L8 163 aaKnown RBP13.79□□□□□ -0.2
MRPL28-210ENST00000483764 AJUBAQ96IF1 538 aa13.79□□□□□ -0.2
MRPL28-210ENST00000483764 TMEM14BQ9NUH8 114 aa13.79□□□□□ -0.2
MRPL28-210ENST00000483764 IGHV3-72A0A0B4J1Y9 119 aa13.78□□□□□ -0.2
MRPL28-210ENST00000483764 TIMM23O14925 209 aa13.78□□□□□ -0.2
MRPL28-210ENST00000483764 ELLP55199 621 aaPredicted RBP13.78□□□□□ -0.2
MRPL28-210ENST00000483764 MEF2BQ02080 365 aaPredicted RBP13.78□□□□□ -0.2
MRPL28-210ENST00000483764 AKIRIN2Q53H80 203 aa13.78□□□□□ -0.2
MRPL28-210ENST00000483764 KLF17Q5JT82 389 aaPredicted RBP13.78□□□□□ -0.2
MRPL28-210ENST00000483764 RUSC1-AS1Q66K80 236 aa13.78□□□□□ -0.2
MRPL28-210ENST00000483764 ETV3LQ6ZN32 361 aa13.78□□□□□ -0.2
MRPL28-210ENST00000483764 DYNAPQ8N1N2 210 aa13.78□□□□□ -0.2
MRPL28-210ENST00000483764 OSR1Q8TAX0 266 aaPredicted RBP13.78□□□□□ -0.2
MRPL28-210ENST00000483764 ZDHHC16Q969W1 377 aa13.78□□□□□ -0.2
MRPL28-210ENST00000483764 FLYWCH2Q96CP2 140 aaKnown RBP13.78□□□□□ -0.2
MRPL28-210ENST00000483764 RHOVQ96L33 236 aa13.78□□□□□ -0.2
MRPL28-210ENST00000483764 TCF19Q9Y242 345 aa13.78□□□□□ -0.2
MRPL28-210ENST00000483764 ZFP92A6NM28 416 aa13.77□□□□□ -0.21
MRPL28-210ENST00000483764 S100A6P06703 90 aa13.77□□□□□ -0.21
MRPL28-210ENST00000483764 TMEM177Q53S58 311 aa13.77□□□□□ -0.21
MRPL28-210ENST00000483764 FAM90A2PQ658T7 463 aa13.77□□□□□ -0.21
MRPL28-210ENST00000483764 BRD3OSQ6XYD6 125 aa13.77□□□□□ -0.21
MRPL28-210ENST00000483764 OR4C13Q8NGP0 309 aa13.77□□□□□ -0.21
MRPL28-210ENST00000483764 HABP2Q14520 560 aaPredicted RBP13.76□□□□□ -0.21
MRPL28-210ENST00000483764 ACSM6Q6P461 480 aa13.76□□□□□ -0.21
MRPL28-210ENST00000483764 VKORC1L1Q8N0U8 176 aa13.76□□□□□ -0.21
MRPL28-210ENST00000483764 OR4A5Q8NH83 315 aa13.76□□□□□ -0.21
MRPL28-210ENST00000483764 CFHR4Q92496 578 aa13.76□□□□□ -0.21
MRPL28-210ENST00000483764 YPEL4Q96NS1 127 aa13.76□□□□□ -0.21
MRPL28-210ENST00000483764 TCEAL7Q9BRU2 100 aa13.76□□□□□ -0.21
MRPL28-210ENST00000483764 SAV1Q9H4B6 383 aaPredicted RBP13.76□□□□□ -0.21
MRPL28-210ENST00000483764 VSIRQ9H7M9 311 aa13.76□□□□□ -0.21
MRPL28-210ENST00000483764 NPVFQ9HCQ7 196 aa13.76□□□□□ -0.21
MRPL28-210ENST00000483764 NAT8Q9UHE5 227 aa13.76□□□□□ -0.21
MRPL28-210ENST00000483764 ZANQ9Y493 2812 aa13.76□□□□□ -0.21
MRPL28-210ENST00000483764 IL6RP08887 468 aaPredicted RBP13.75□□□□□ -0.21
MRPL28-210ENST00000483764 CDC34P49427 236 aaPredicted RBP13.75□□□□□ -0.21
MRPL28-210ENST00000483764 RPS16P62249 146 aaKnown RBP13.75□□□□□ -0.21
MRPL28-210ENST00000483764 OR4A47Q6IF82 309 aa13.75□□□□□ -0.21
MRPL28-210ENST00000483764 CYP2G1PQ6ZSU1 146 aa13.75□□□□□ -0.21
MRPL28-210ENST00000483764 SSX9Q7RTT3 188 aa13.75□□□□□ -0.21
MRPL28-210ENST00000483764 OR5B3Q8NH48 314 aa13.75□□□□□ -0.21
MRPL28-210ENST00000483764 NANPQ8TBE9 248 aa13.75□□□□□ -0.21
MRPL28-210ENST00000483764 HARBI1Q96MB7 349 aa13.75□□□□□ -0.21
MRPL28-210ENST00000483764 C20orf24Q9BUV8 137 aa13.75□□□□□ -0.21
MRPL28-210ENST00000483764 BET1LQ9NYM9 111 aa13.75□□□□□ -0.21
MRPL28-210ENST00000483764 AKAP9Q99996 3911 aa13.75□□□□□ -0.21
MRPL28-210ENST00000483764 SRRM4A7MD48 611 aaKnown RBP13.74□□□□□ -0.21
MRPL28-210ENST00000483764 INS-IGF2F8WCM5 200 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 S100A8P05109 93 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 BPIFB3P59826 476 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 VSTM2AQ8TAG5 236 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 SDF2L1Q9HCN8 221 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 A0A0U1RQK1 487 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 PRSS46E5RG02 174 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 CLDN34H7C241 214 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 PDE6DO43924 150 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 KBTBD11O94819 623 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 VENTXO95231 258 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 NPY1RP25929 384 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 LGALS7P47929 136 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 RND2P52198 227 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 SLC24A4Q8NFF2 622 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 RAB24Q969Q5 203 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 RITA1Q96K30 269 aa13.74□□□□□ -0.21
MRPL28-210ENST00000483764 A0A1W2PPV4 95 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 ZNF727A8MUV8 499 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 F6UZH7 168 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 UPK2O00526 184 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 OPN1MWP04001 364 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 OPN1MW2P0DN77 364 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 OPN1MW3P0DN78 364 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 BRS3P32247 399 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 AKR1C3P42330 323 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 CEBPGP53567 150 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 PRCDQ00LT1 54 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 LINC00518Q8N0U6 118 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 FAM24BQ8N5W8 94 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 BTF3L4Q96K17 158 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 RNF5Q99942 180 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 METTL1Q9UBP6 276 aaKnown RBP13.73□□□□□ -0.21
MRPL28-210ENST00000483764 ARL2-SNX15V9GYD0 113 aa13.73□□□□□ -0.21
MRPL28-210ENST00000483764 FLNAP21333 2647 aaKnown RBP13.73□□□□□ -0.21
MRPL28-210ENST00000483764 CD5LO43866 347 aa13.72□□□□□ -0.21
MRPL28-210ENST00000483764 MT-CO2P00403 227 aa13.72□□□□□ -0.21
MRPL28-210ENST00000483764 FSHBP01225 129 aa13.72□□□□□ -0.21
MRPL28-210ENST00000483764 IGKV1D-33P01593 117 aa13.72□□□□□ -0.21
MRPL28-210ENST00000483764 IGKV1-33P01594 117 aa13.72□□□□□ -0.21
MRPL28-210ENST00000483764 CD24P25063 80 aa13.72□□□□□ -0.21
MRPL28-210ENST00000483764 FGF8P55075 233 aaPredicted RBP13.72□□□□□ -0.21
MRPL28-210ENST00000483764 KRTAP1-1Q07627 177 aa13.72□□□□□ -0.21
MRPL28-210ENST00000483764 TMEM241Q24JQ0 296 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms