RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 VN1R17PQ8TDU5 208 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 PHLDA1Q8WV24 401 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-207ENST00000483407 NUDCD2Q8WVJ2 157 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 TMEM190Q8WZ59 177 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 GALNT14Q96FL9 552 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 ZNF436Q9C0F3 470 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-207ENST00000483407 MFFQ9GZY8 342 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 DAZ1Q9NQZ3 744 aaKnown RBP4.34□□□□□ -1.71
CSDE1-207ENST00000483407 UBQLN2Q9UHD9 624 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 ANXA10Q9UJ72 324 aa4.34□□□□□ -1.71
CSDE1-207ENST00000483407 ELF5Q9UKW6 265 aaPredicted RBP4.34□□□□□ -1.71
CSDE1-207ENST00000483407 KIAA1109Q2LD37 5005 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 TRDV1A0A1B0GX56 115 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 IGLC7A0M8Q6 106 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 TMEM235A6NFC5 223 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 NDUFA4O00483 81 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 TNFSF12O43508 249 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 DEDDO75618 318 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 HPRT1P00492 218 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 IFNA4P05014 189 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 FGF2P09038 288 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 NQO2P16083 231 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 RPL35AP18077 110 aaKnown RBP4.33□□□□□ -1.72
CSDE1-207ENST00000483407 CMC4P56277 68 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-207ENST00000483407 BRWD1-AS2P59051 145 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 TAS2R31P59538 309 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 ARPC4P59998 168 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 ERVK-16P61578 105 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 EIF4EBP1Q13541 118 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-207ENST00000483407 MSMO1Q15800 293 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 C10orf25Q5T742 122 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 C22orf42Q6IC83 251 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 SLC25A24Q6NUK1 477 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 SPSB3Q6PJ21 355 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 HSD17B13Q7Z5P4 300 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-207ENST00000483407 GDPD1Q8N9F7 314 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 DMBX1Q8NFW5 382 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 OR13F1Q8NGS4 319 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 CD300LFQ8TDQ1 290 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 SECTM1Q8WVN6 248 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 BSCL2Q96G97 398 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-207ENST00000483407 ATP6V0BQ99437 205 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 C20orf24Q9BUV8 137 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 NDUFB11Q9NX14 153 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 C21orf62Q9NYP8 219 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 BLOC1S6Q9UL45 172 aa4.33□□□□□ -1.72
CSDE1-207ENST00000483407 PLECQ15149 4684 aaKnown RBP4.32□□□□□ -1.72
CSDE1-207ENST00000483407 SMIM30A4D0T7 59 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 OR2T8A6NH00 312 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 CGB1A6NKQ9 187 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 C15orf62A8K5M9 175 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 MPTX1A8MV57 137 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 K7EMT4 169 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 SULT1C2O00338 296 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 UPK2O00526 184 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 NDUFB4O95168 129 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 PPYP01298 95 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 SLPIP03973 132 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 CTSDP07339 412 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-207ENST00000483407 TRAPPC2P0DI81 140 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 TRAPPC2BP0DI82 140 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 OR13C7P0DN81 318 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 RPA2P15927 270 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 FCGR2CP31995 323 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 AQP4P55087 323 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 TCTAP57738 103 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 RELQ04864 619 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-207ENST00000483407 RBMS2Q15434 407 aaKnown RBP4.32□□□□□ -1.72
CSDE1-207ENST00000483407 POU2AF1Q16633 256 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 ODF3L2Q3SX64 289 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 AADACL3Q5VUY0 350 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 UBAC2Q8NBM4 344 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 BEST4Q8NFU0 473 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 OR1L8Q8NGR8 309 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 OR5B3Q8NH48 314 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 C11orf45Q8TAV5 145 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 GATAD1Q8WUU5 269 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 BORCS5Q969J3 196 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 RRNAD1Q96FB5 475 aaKnown RBP4.32□□□□□ -1.72
CSDE1-207ENST00000483407 RARRES2Q99969 163 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 SLC5A7Q9GZV3 580 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 CSTL1Q9H114 145 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 CCL28Q9NRJ3 127 aa4.32□□□□□ -1.72
CSDE1-207ENST00000483407 TRAV3A0A0B4J244 114 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 NUPL2O15504 423 aaKnown RBP4.31□□□□□ -1.72
CSDE1-207ENST00000483407 ZNF207O43670 478 aaKnown RBP4.31□□□□□ -1.72
CSDE1-207ENST00000483407 SSX5O60225 188 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 MRPS14O60783 128 aaKnown RBP4.31□□□□□ -1.72
CSDE1-207ENST00000483407 SNAPC5O75971 98 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 YIF1AO95070 293 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 S1PR2O95136 353 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 SERPINE2P07093 398 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 FCGR2BP31994 310 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-207ENST00000483407 FXYD4P59646 89 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 HERV-K104P61576 105 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 PAFAH1B2P68402 229 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 Q56UQ5 140 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 PQLC2Q6ZP29 291 aa4.31□□□□□ -1.72
CSDE1-207ENST00000483407 TPRA1Q86W33 373 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms