RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 NUDT11Q96G61 164 aa12.51□□□□□ -0.41
DDR1-244ENST00000482873 C9JCJ5 164 aa12.5□□□□□ -0.41
DDR1-244ENST00000482873 PMCHP20382 165 aa12.5□□□□□ -0.41
DDR1-244ENST00000482873 HTD2P86397 168 aa12.5□□□□□ -0.41
DDR1-244ENST00000482873 LYG1Q8N1E2 194 aa12.5□□□□□ -0.41
DDR1-244ENST00000482873 TCTEX1D1Q8N7M0 179 aa12.5□□□□□ -0.41
DDR1-244ENST00000482873 HSD17B10Q99714 261 aaKnown RBP12.5□□□□□ -0.41
DDR1-244ENST00000482873 ALKBH7Q9BT30 221 aaPredicted RBP12.5□□□□□ -0.41
DDR1-244ENST00000482873 SPTA1P02549 2419 aa12.5□□□□□ -0.41
DDR1-244ENST00000482873 TRGV10A0A0A0MS01 117 aa12.5□□□□□ -0.41
DDR1-244ENST00000482873 A0A1W2PS18 150 aa12.5□□□□□ -0.41
DDR1-244ENST00000482873 AHRRA9YTQ3 701 aa12.5□□□□□ -0.41
DDR1-244ENST00000482873 GFRA3O60609 400 aa12.5□□□□□ -0.41
DDR1-244ENST00000482873 HYPMO75409 117 aa12.5□□□□□ -0.41
DDR1-244ENST00000482873 SRRM5B3KS81 715 aa12.49□□□□□ -0.41
DDR1-244ENST00000482873 IGLC2P0DOY2 106 aa12.49□□□□□ -0.41
DDR1-244ENST00000482873 IGLC3P0DOY3 106 aa12.49□□□□□ -0.41
DDR1-244ENST00000482873 VDAC2P45880 294 aaPredicted RBP12.49□□□□□ -0.41
DDR1-244ENST00000482873 TMPRSS3P57727 454 aa12.49□□□□□ -0.41
DDR1-244ENST00000482873 MBNL2Q5VZF2 373 aaKnown RBP12.49□□□□□ -0.41
DDR1-244ENST00000482873 DOLPP1Q86YN1 238 aa12.49□□□□□ -0.41
DDR1-244ENST00000482873 C11orf52Q96A22 123 aa12.49□□□□□ -0.41
DDR1-244ENST00000482873 LSM4Q9Y4Z0 139 aaKnown RBP12.49□□□□□ -0.41
DDR1-244ENST00000482873 ZNF253O75346 499 aa12.49□□□□□ -0.41
DDR1-244ENST00000482873 C1orf162Q8NEQ5 155 aaPredicted RBP12.49□□□□□ -0.41
DDR1-244ENST00000482873 PRR7Q8TB68 274 aa12.49□□□□□ -0.41
DDR1-244ENST00000482873 UHRF2Q96PU4 802 aa12.49□□□□□ -0.41
DDR1-244ENST00000482873 CCL13Q99616 98 aa12.49□□□□□ -0.41
DDR1-244ENST00000482873 WNT10AQ9GZT5 417 aa12.49□□□□□ -0.41
DDR1-244ENST00000482873 RNASE7Q9H1E1 156 aaKnown RBP12.49□□□□□ -0.41
DDR1-244ENST00000482873 TRBV9A0A0B4J1U6 114 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 FXYD3Q14802 87 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 Q6ZN92 141 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 STPG3Q8N7X2 389 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 OR4P4Q8NGL7 312 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 OR4A16Q8NH70 328 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 KCNS1Q96KK3 526 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 TXN2Q99757 166 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 UQCR10Q9UDW1 63 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 TRAV34A0A0B4J273 112 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 KLK10O43240 276 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 MMP23AO75900 390 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 OR5G3P0C626 314 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 TCL1AP56279 114 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 CX3CL1P78423 397 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 CCL8P80075 99 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 TMEM136Q6ZRR5 245 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 FAM19A2Q8N3H0 131 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 FAM216BQ8N7L0 139 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 LAMTOR2Q9Y2Q5 125 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 LY96Q9Y6Y9 160 aa12.48□□□□□ -0.41
DDR1-244ENST00000482873 C3orf79P0CE67 100 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 CENPWQ5EE01 88 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 Q6ZVH6 145 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 NPVFQ9HCQ7 196 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 LRBAP50851 2863 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 LOC105371242A0A075B767 164 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 CRYBB3P26998 211 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 SRIP30626 198 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 APOBEC3AP31941 199 aaPredicted RBP12.47□□□□□ -0.41
DDR1-244ENST00000482873 LOXL3P58215 753 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 RHOBP62745 196 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 UBE2V1Q13404 147 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 OR10J3Q5JRS4 329 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 PQLC2Q6ZP29 291 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 NIT1Q86X76 327 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 IFI27L2Q9H2X8 130 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 CALYQ9NYX4 217 aa12.47□□□□□ -0.41
DDR1-244ENST00000482873 SAA2-SAA4A0A096LPE2 208 aa12.46□□□□□ -0.41
DDR1-244ENST00000482873 ZNF324O75467 553 aaPredicted RBP12.46□□□□□ -0.41
DDR1-244ENST00000482873 GNG4P50150 75 aa12.46□□□□□ -0.41
DDR1-244ENST00000482873 ATOH7Q8N100 152 aa12.46□□□□□ -0.41
DDR1-244ENST00000482873 CLUHP3Q96NS8 147 aa12.46□□□□□ -0.41
DDR1-244ENST00000482873 HELTA6NFD8 242 aa12.46□□□□□ -0.41
DDR1-244ENST00000482873 BMPR1BO00238 502 aa12.46□□□□□ -0.41
DDR1-244ENST00000482873 ACTL6BO94805 426 aa12.46□□□□□ -0.41
DDR1-244ENST00000482873 ADH4P08319 380 aa12.46□□□□□ -0.41
DDR1-244ENST00000482873 HNRNPA3P51991 378 aaKnown RBP12.46□□□□□ -0.41
DDR1-244ENST00000482873 RELBQ01201 579 aa12.46□□□□□ -0.41
DDR1-244ENST00000482873 CT45A1Q5HYN5 189 aa12.46□□□□□ -0.41
DDR1-244ENST00000482873 FAM90A1Q86YD7 464 aa12.46□□□□□ -0.41
DDR1-244ENST00000482873 CT45A3Q8NHU0 189 aa12.46□□□□□ -0.41
DDR1-244ENST00000482873 S1PR3Q99500 378 aa12.46□□□□□ -0.41
DDR1-244ENST00000482873 TMEM140Q9NV12 185 aa12.46□□□□□ -0.41
DDR1-244ENST00000482873 TLN1Q9Y490 2541 aaKnown RBP12.46□□□□□ -0.42
DDR1-244ENST00000482873 MBD3L4A6NDZ8 208 aaPredicted RBP12.45□□□□□ -0.42
DDR1-244ENST00000482873 MBD3L3A6NE82 208 aaPredicted RBP12.45□□□□□ -0.42
DDR1-244ENST00000482873 DPRXA6NFQ7 191 aa12.45□□□□□ -0.42
DDR1-244ENST00000482873 MBD3L5A6NJ08 208 aaPredicted RBP12.45□□□□□ -0.42
DDR1-244ENST00000482873 MGST3O14880 152 aa12.45□□□□□ -0.42
DDR1-244ENST00000482873 MT-ND6P03923 174 aa12.45□□□□□ -0.42
DDR1-244ENST00000482873 S100A7P31151 101 aa12.45□□□□□ -0.42
DDR1-244ENST00000482873 MRPL54Q6P161 138 aaKnown RBP12.45□□□□□ -0.42
DDR1-244ENST00000482873 MIR17HGQ75NE6 70 aa12.45□□□□□ -0.42
DDR1-244ENST00000482873 MBD3L2Q8NHZ7 208 aaPredicted RBP12.45□□□□□ -0.42
DDR1-244ENST00000482873 VPS25Q9BRG1 176 aa12.45□□□□□ -0.42
DDR1-244ENST00000482873 PRRX1P54821 245 aa12.45□□□□□ -0.42
DDR1-244ENST00000482873 TCF15Q12870 199 aa12.45□□□□□ -0.42
DDR1-244ENST00000482873 TEPPQ6URK8 271 aa12.45□□□□□ -0.42
DDR1-244ENST00000482873 RND1Q92730 232 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms