RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 IFNA4P05014 189 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 S100A8P05109 93 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 P0DMU3 169 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 FAM231AP0DMU4 169 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 FAM231CP0DMU5 169 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 SPI1P17947 270 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 PHBP35232 272 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 PPP1CCP36873 323 aaKnown RBP2.16□□□□□ -2.06
SF3B1-210ENST00000482158 RBP2P50120 134 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 FGF12P61328 243 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 RRAS2P62070 204 aaPredicted RBP2.16□□□□□ -2.06
SF3B1-210ENST00000482158 RPS24P62847 133 aaKnown RBP2.16□□□□□ -2.06
SF3B1-210ENST00000482158 GNG5P63218 68 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 HPCAP84074 193 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 EMX2Q04743 252 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 OR8B8Q15620 311 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 MESTQ5EB52 335 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 FAM201AQ5SY85 155 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 AKR1C8PQ5T2L2 129 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 OR11H6Q8NGC7 330 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 OR8B12Q8NGG6 310 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 GNPDA2Q8TDQ7 276 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 MND1Q9BWT6 205 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 ULBP3Q9BZM4 244 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 C11orf1Q9H5F2 150 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 UBQLN4Q9NRR5 601 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 RSL24D1Q9UHA3 163 aaKnown RBP2.16□□□□□ -2.06
SF3B1-210ENST00000482158 PSORS1C2Q9UIG4 136 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 FIS1Q9Y3D6 152 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 NUP210LQ5VU65 1888 aa2.16□□□□□ -2.06
SF3B1-210ENST00000482158 ADGBQ8N7X0 1667 aa2.15□□□□□ -2.06
SF3B1-210ENST00000482158 FANCMQ8IYD8 2048 aa2.15□□□□□ -2.06
SF3B1-210ENST00000482158 ATG2AQ2TAZ0 1938 aa2.15□□□□□ -2.06
SF3B1-210ENST00000482158 ECM29Q5VYK3 1845 aa2.15□□□□□ -2.06
SF3B1-210ENST00000482158 PHIPQ8WWQ0 1821 aa2.15□□□□□ -2.06
SF3B1-210ENST00000482158 A0A1B0GV50 99 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 INMT-MINDY4F8WBC2 141 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 GADD45GO95257 159 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 CSN2P05814 226 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 MPC1LP0DKB6 136 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 CCL1P22362 96 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 DDTP30046 118 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 AKR1C2P52895 323 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 CTBP2P56545 445 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 RPS20P60866 119 aaKnown RBP2.15□□□□□ -2.07
SF3B1-210ENST00000482158 NCALDP61601 193 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 RELAQ04206 551 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 HES1Q14469 280 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 EBPQ15125 230 aaKnown RBP2.15□□□□□ -2.07
SF3B1-210ENST00000482158 BATFQ16520 125 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 RNASE10Q5GAN6 216 aaKnown RBP2.15□□□□□ -2.07
SF3B1-210ENST00000482158 AGTRAPQ6RW13 159 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 SCGB1D4Q6XE38 83 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 JOSD2Q8TAC2 188 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 ACOT12Q8WYK0 555 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 SLC35G5Q96KT7 338 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 TMEM126AQ9H061 195 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 TMEM222Q9H0R3 208 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 ACER3Q9NUN7 267 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 UQCC1Q9NVA1 299 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 CALML5Q9NZT1 146 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 HSPB8Q9UJY1 196 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 PLCH2O75038 1416 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 TNS3Q68CZ2 1445 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 MYH7BA7E2Y1 1941 aa2.15□□□□□ -2.07
SF3B1-210ENST00000482158 BCORL1Q5H9F3 1711 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 GBF1Q92538 1859 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 ABCC12Q96J65 1359 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 TRAV36DV7A0A075B6V5 113 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 MEIKINA0A087WXM9 373 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 BORCS7-ASMTA0A0B4J1R7 106 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 TRAV26-2A0A0B4J265 109 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 A0A1B0GX51 115 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 FAM92AA1XBS5 289 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 KNCNA6PVL3 124 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 J3KT08 172 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 J3QKU1 62 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 COPEO14579 308 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 BANF1O75531 89 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 LY6HO94772 140 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 TNFSF15O95150 251 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 HBZP02008 142 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 APOA2P02652 100 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 METTL15P1P0C7V9 234 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 UBBP0CG47 229 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 FGF6P10767 208 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 RPS3P23396 243 aaKnown RBP eCLIP2.14□□□□□ -2.071e-7■□□□□ 9
SF3B1-210ENST00000482158 PIGPP57054 158 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 MAXP61244 160 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 HLA-DRB3P79483 266 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 JOSD1Q15040 202 aaPredicted RBP2.14□□□□□ -2.07
SF3B1-210ENST00000482158 GDPD1Q8N9F7 314 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 OR13C4Q8NGS5 318 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 OR51H1Q8NH63 302 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 THEM6Q8WUY1 208 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 CANT1Q8WVQ1 401 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 ROPN1LQ96C74 230 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 PLEKHB2Q96CS7 222 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 LYSMD1Q96S90 227 aa2.14□□□□□ -2.07
SF3B1-210ENST00000482158 SERPINI1Q99574 410 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms