RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 OR13F1Q8NGS4 319 aa10.61□□□□□ -0.71
HDAC6-224ENST00000481929 OR51H1Q8NH63 302 aa10.61□□□□□ -0.71
HDAC6-224ENST00000481929 NUDCD2Q8WVJ2 157 aa10.61□□□□□ -0.71
HDAC6-224ENST00000481929 ATG101Q9BSB4 218 aa10.61□□□□□ -0.71
HDAC6-224ENST00000481929 ATG5Q9H1Y0 275 aa10.61□□□□□ -0.71
HDAC6-224ENST00000481929 FKBP14Q9NWM8 211 aa10.61□□□□□ -0.71
HDAC6-224ENST00000481929 A0A1W2PS18 150 aa10.6□□□□□ -0.71
HDAC6-224ENST00000481929 MARCH11A6NNE9 402 aa10.6□□□□□ -0.71
HDAC6-224ENST00000481929 MT-CO2P00403 227 aa10.6□□□□□ -0.71
HDAC6-224ENST00000481929 IGHV3-48P01763 117 aa10.6□□□□□ -0.71
HDAC6-224ENST00000481929 PSMA1P25786 263 aaKnown RBP10.6□□□□□ -0.71
HDAC6-224ENST00000481929 FGF9P31371 208 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-224ENST00000481929 TMEM88Q6PEY1 159 aa10.6□□□□□ -0.71
HDAC6-224ENST00000481929 ZNF600Q6ZNG1 722 aa10.6□□□□□ -0.71
HDAC6-224ENST00000481929 RAB40CQ96S21 281 aa10.6□□□□□ -0.71
HDAC6-224ENST00000481929 NEU1Q99519 415 aa10.6□□□□□ -0.71
HDAC6-224ENST00000481929 NIPSNAP3BQ9BS92 247 aa10.6□□□□□ -0.71
HDAC6-224ENST00000481929 SLC5A7Q9GZV3 580 aa10.6□□□□□ -0.71
HDAC6-224ENST00000481929 ZFAND3Q9H8U3 227 aa10.6□□□□□ -0.71
HDAC6-224ENST00000481929 S100A14Q9HCY8 104 aa10.6□□□□□ -0.71
HDAC6-224ENST00000481929 NSG2Q9Y328 171 aa10.6□□□□□ -0.71
HDAC6-224ENST00000481929 PUS1Q9Y606 427 aaKnown RBP eCLIP10.6□□□□□ -0.71
HDAC6-224ENST00000481929 SNAPC5O75971 98 aa10.59□□□□□ -0.71
HDAC6-224ENST00000481929 NPPCP23582 126 aa10.59□□□□□ -0.71
HDAC6-224ENST00000481929 FCGR2CP31995 323 aa10.59□□□□□ -0.71
HDAC6-224ENST00000481929 ARPC4P59998 168 aa10.59□□□□□ -0.71
HDAC6-224ENST00000481929 AADACL3Q5VUY0 350 aa10.59□□□□□ -0.71
HDAC6-224ENST00000481929 C15orf53Q8NAA6 179 aa10.59□□□□□ -0.71
HDAC6-224ENST00000481929 DCANP1Q8TF63 244 aa10.59□□□□□ -0.71
HDAC6-224ENST00000481929 MOB3AQ96BX8 217 aa10.59□□□□□ -0.71
HDAC6-224ENST00000481929 DKK2Q9UBU2 259 aa10.59□□□□□ -0.71
HDAC6-224ENST00000481929 SMIM9A6NGZ8 99 aa10.58□□□□□ -0.72
HDAC6-224ENST00000481929 IFITM5A6NNB3 132 aa10.58□□□□□ -0.72
HDAC6-224ENST00000481929 PDCD5O14737 125 aa10.58□□□□□ -0.72
HDAC6-224ENST00000481929 PPYP01298 95 aa10.58□□□□□ -0.72
HDAC6-224ENST00000481929 HSMCR30P0CW71 290 aa10.58□□□□□ -0.72
HDAC6-224ENST00000481929 P2RY1P47900 373 aa10.58□□□□□ -0.72
HDAC6-224ENST00000481929 OR10A3P58181 314 aa10.58□□□□□ -0.72
HDAC6-224ENST00000481929 GNG2P59768 71 aa10.58□□□□□ -0.72
HDAC6-224ENST00000481929 KCTD21Q4G0X4 260 aa10.58□□□□□ -0.72
HDAC6-224ENST00000481929 PSMG4Q5JS54 123 aa10.58□□□□□ -0.72
HDAC6-224ENST00000481929 FAM222AQ5U5X8 452 aa10.58□□□□□ -0.72
HDAC6-224ENST00000481929 ZNF705AQ6ZN79 300 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-224ENST00000481929 PINX1Q96BK5 328 aaKnown RBP10.58□□□□□ -0.72
HDAC6-224ENST00000481929 CCDC90BQ9GZT6 254 aa10.58□□□□□ -0.72
HDAC6-224ENST00000481929 FKBP11Q9NYL4 201 aa10.58□□□□□ -0.72
HDAC6-224ENST00000481929 PRNDQ9UKY0 176 aa10.58□□□□□ -0.72
HDAC6-224ENST00000481929 RFNGQ9Y644 331 aa10.58□□□□□ -0.72
HDAC6-224ENST00000481929 TMEM235A6NFC5 223 aa10.57□□□□□ -0.72
HDAC6-224ENST00000481929 ZNF705FA8MVS1 300 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-224ENST00000481929 GNAO1P09471 354 aa10.57□□□□□ -0.72
HDAC6-224ENST00000481929 ZNF705DP0CH99 300 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-224ENST00000481929 ZNF705BP0CI00 300 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-224ENST00000481929 NPBWR1P48145 328 aa10.57□□□□□ -0.72
HDAC6-224ENST00000481929 FXYD4P59646 89 aa10.57□□□□□ -0.72
HDAC6-224ENST00000481929 FABP5Q01469 135 aa10.57□□□□□ -0.72
HDAC6-224ENST00000481929 TPRA1Q86W33 373 aa10.57□□□□□ -0.72
HDAC6-224ENST00000481929 ZNRF2Q8NHG8 242 aa10.57□□□□□ -0.72
HDAC6-224ENST00000481929 NARS2Q96I59 477 aaKnown RBP10.57□□□□□ -0.72
HDAC6-224ENST00000481929 METTL26Q96S19 204 aa10.57□□□□□ -0.72
HDAC6-224ENST00000481929 SRRM2Q9UQ35 2752 aaKnown RBP10.57□□□□□ -0.72
HDAC6-224ENST00000481929 A0A1B0GU03 582 aa10.56□□□□□ -0.72
HDAC6-224ENST00000481929 HELTA6NFD8 242 aa10.56□□□□□ -0.72
HDAC6-224ENST00000481929 KRASP01116 189 aa10.56□□□□□ -0.72
HDAC6-224ENST00000481929 EIF2B2P49770 351 aaKnown RBP10.56□□□□□ -0.72
HDAC6-224ENST00000481929 DHRS2Q13268 280 aa10.56□□□□□ -0.72
HDAC6-224ENST00000481929 OXA1LQ15070 435 aa10.56□□□□□ -0.72
HDAC6-224ENST00000481929 ZNF818PQ6ZRF7 136 aa10.56□□□□□ -0.72
HDAC6-224ENST00000481929 FLG2Q5D862 2391 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-224ENST00000481929 IGHV3OR16-12A0A075B7B8 117 aa10.55□□□□□ -0.72
HDAC6-224ENST00000481929 PTGES3LE9PB15 166 aa10.55□□□□□ -0.72
HDAC6-224ENST00000481929 CASQ2O14958 399 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-224ENST00000481929 SSX5O60225 188 aa10.55□□□□□ -0.72
HDAC6-224ENST00000481929 PTHLHP12272 177 aa10.55□□□□□ -0.72
HDAC6-224ENST00000481929 KRTAP10-2P60368 255 aa10.55□□□□□ -0.72
HDAC6-224ENST00000481929 TMEM17Q86X19 198 aa10.55□□□□□ -0.72
HDAC6-224ENST00000481929 CADM3Q8N126 398 aa10.55□□□□□ -0.72
HDAC6-224ENST00000481929 ZNF114Q8NC26 417 aa10.55□□□□□ -0.72
HDAC6-224ENST00000481929 BEST4Q8NFU0 473 aa10.55□□□□□ -0.72
HDAC6-224ENST00000481929 ACOT13Q9NPJ3 140 aa10.55□□□□□ -0.72
HDAC6-224ENST00000481929 MYCBP2O75592 4640 aa10.54□□□□□ -0.72
HDAC6-224ENST00000481929 H3BMM0 161 aa10.54□□□□□ -0.72
HDAC6-224ENST00000481929 F2RP25116 425 aa10.54□□□□□ -0.72
HDAC6-224ENST00000481929 CRYBB3P26998 211 aa10.54□□□□□ -0.72
HDAC6-224ENST00000481929 G6PCP35575 357 aa10.54□□□□□ -0.72
HDAC6-224ENST00000481929 LPAR6P43657 344 aa10.54□□□□□ -0.72
HDAC6-224ENST00000481929 TSPAN14Q8NG11 270 aa10.54□□□□□ -0.72
HDAC6-224ENST00000481929 TSC22D3Q99576 134 aa10.54□□□□□ -0.72
HDAC6-224ENST00000481929 TRAV1-2A0A0B4J238 106 aa10.53□□□□□ -0.72
HDAC6-224ENST00000481929 DBX1A6NMT0 343 aa10.53□□□□□ -0.72
HDAC6-224ENST00000481929 SCGNO76038 276 aa10.53□□□□□ -0.72
HDAC6-224ENST00000481929 RLN1P04808 185 aa10.53□□□□□ -0.72
HDAC6-224ENST00000481929 DAD1P61803 113 aa10.53□□□□□ -0.72
HDAC6-224ENST00000481929 SNRPD3P62318 126 aaKnown RBP10.53□□□□□ -0.72
HDAC6-224ENST00000481929 OGFRL1Q5TC84 451 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-224ENST00000481929 GSG1LQ6UXU4 331 aa10.53□□□□□ -0.72
HDAC6-224ENST00000481929 PACRGLQ8N7B6 248 aa10.53□□□□□ -0.72
HDAC6-224ENST00000481929 BORCS5Q969J3 196 aa10.53□□□□□ -0.72
HDAC6-224ENST00000481929 C18orf15Q96N68 181 aa10.53□□□□□ -0.72
HDAC6-224ENST00000481929 C8orf4Q9NR00 106 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms