RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ABHD1Q96SE0 405 aa13.75□□□□□ -0.21
CLK1-211ENST00000481641 A0A0B4J293 547 aa13.74□□□□□ -0.21
CLK1-211ENST00000481641 A0A0J9YWU9 116 aa13.74□□□□□ -0.21
CLK1-211ENST00000481641 OR4C46A6NHA9 309 aa13.74□□□□□ -0.21
CLK1-211ENST00000481641 APOC4P55056 127 aa13.74□□□□□ -0.21
CLK1-211ENST00000481641 ERHP84090 104 aaKnown RBP13.74□□□□□ -0.21
CLK1-211ENST00000481641 RELQ04864 619 aaPredicted RBP13.74□□□□□ -0.21
CLK1-211ENST00000481641 SP6Q3SY56 376 aa13.74□□□□□ -0.21
CLK1-211ENST00000481641 TMEM116Q8NCL8 245 aa13.74□□□□□ -0.21
CLK1-211ENST00000481641 TXN2Q99757 166 aa13.74□□□□□ -0.21
CLK1-211ENST00000481641 NXF2Q9GZY0 626 aaKnown RBP13.74□□□□□ -0.21
CLK1-211ENST00000481641 MTFP1Q9UDX5 166 aa13.74□□□□□ -0.21
CLK1-211ENST00000481641 SPRY2O43597 315 aa13.73□□□□□ -0.21
CLK1-211ENST00000481641 GNG7O60262 68 aa13.73□□□□□ -0.21
CLK1-211ENST00000481641 P0C879 139 aa13.73□□□□□ -0.21
CLK1-211ENST00000481641 FCGR2BP31994 310 aaPredicted RBP13.73□□□□□ -0.21
CLK1-211ENST00000481641 PMS2P11Q13670 270 aa13.73□□□□□ -0.21
CLK1-211ENST00000481641 AP3S1Q92572 193 aa13.73□□□□□ -0.21
CLK1-211ENST00000481641 ZNF486Q96H40 463 aaPredicted RBP13.73□□□□□ -0.21
CLK1-211ENST00000481641 OR10C1Q96KK4 312 aa13.73□□□□□ -0.21
CLK1-211ENST00000481641 MIXL1Q9H2W2 232 aa13.73□□□□□ -0.21
CLK1-211ENST00000481641 TRAV14DV4A0A0A6YYC5 116 aa13.72□□□□□ -0.21
CLK1-211ENST00000481641 C3orf85A0A1B0GTC6 90 aa13.72□□□□□ -0.21
CLK1-211ENST00000481641 ST8SIA3O43173 380 aa13.72□□□□□ -0.21
CLK1-211ENST00000481641 AKR1C2P52895 323 aa13.72□□□□□ -0.21
CLK1-211ENST00000481641 SCGB2B2Q4G0G5 96 aa13.72□□□□□ -0.21
CLK1-211ENST00000481641 Q6ZWC4 215 aa13.72□□□□□ -0.21
CLK1-211ENST00000481641 LYG2Q86SG7 212 aa13.72□□□□□ -0.21
CLK1-211ENST00000481641 GBGT1Q8N5D6 347 aa13.72□□□□□ -0.21
CLK1-211ENST00000481641 ARRDC1Q8N5I2 433 aa13.72□□□□□ -0.21
CLK1-211ENST00000481641 A0A0G2JRQ6 117 aa13.71□□□□□ -0.21
CLK1-211ENST00000481641 IFNA17P01571 189 aa13.71□□□□□ -0.21
CLK1-211ENST00000481641 APOHP02749 345 aaPredicted RBP13.71□□□□□ -0.21
CLK1-211ENST00000481641 ETV6P41212 452 aa13.71□□□□□ -0.21
CLK1-211ENST00000481641 TRIM16LQ309B1 348 aa13.71□□□□□ -0.21
CLK1-211ENST00000481641 TOMM20LQ6UXN7 152 aa13.71□□□□□ -0.21
CLK1-211ENST00000481641 WFDC3Q8IUB2 231 aa13.71□□□□□ -0.21
CLK1-211ENST00000481641 STPG3Q8N7X2 389 aa13.71□□□□□ -0.21
CLK1-211ENST00000481641 SLC35G3Q8N808 338 aa13.71□□□□□ -0.21
CLK1-211ENST00000481641 OR13C8Q8NGS7 320 aa13.71□□□□□ -0.21
CLK1-211ENST00000481641 MARCH1Q8TCQ1 289 aa13.71□□□□□ -0.21
CLK1-211ENST00000481641 COPZ2Q9P299 210 aa13.71□□□□□ -0.21
CLK1-211ENST00000481641 IGHV3-66A0A0C4DH42 116 aa13.7□□□□□ -0.22
CLK1-211ENST00000481641 RAB3DO95716 219 aa13.7□□□□□ -0.22
CLK1-211ENST00000481641 CD74P04233 296 aa13.7□□□□□ -0.22
CLK1-211ENST00000481641 BMI1P35226 326 aa13.7□□□□□ -0.22
CLK1-211ENST00000481641 SNCAP37840 140 aa13.7□□□□□ -0.22
CLK1-211ENST00000481641 FAM90A2PQ658T7 463 aa13.7□□□□□ -0.22
CLK1-211ENST00000481641 FAAP20Q6NZ36 180 aa13.7□□□□□ -0.22
CLK1-211ENST00000481641 LILRB2Q8N423 598 aa13.7□□□□□ -0.22
CLK1-211ENST00000481641 TMEM229BQ8NBD8 167 aa13.7□□□□□ -0.22
CLK1-211ENST00000481641 TERB2Q8NHR7 220 aa13.7□□□□□ -0.22
CLK1-211ENST00000481641 RNF183Q96D59 192 aa13.7□□□□□ -0.22
CLK1-211ENST00000481641 GALNT14Q96FL9 552 aa13.7□□□□□ -0.22
CLK1-211ENST00000481641 MAP6D1Q9H9H5 199 aa13.7□□□□□ -0.22
CLK1-211ENST00000481641 TP53TG1Q9Y2A0 90 aa13.7□□□□□ -0.22
CLK1-211ENST00000481641 KIR2DL5BA0A0G2JN68 375 aa13.69□□□□□ -0.22
CLK1-211ENST00000481641 KIR2DL5BA0A0G2JPC4 375 aa13.69□□□□□ -0.22
CLK1-211ENST00000481641 CXorf65A6NEN9 183 aa13.69□□□□□ -0.22
CLK1-211ENST00000481641 UBE2CO00762 179 aa13.69□□□□□ -0.22
CLK1-211ENST00000481641 CTDSP2O14595 271 aa13.69□□□□□ -0.22
CLK1-211ENST00000481641 RNASE2P10153 161 aaKnown RBP13.69□□□□□ -0.22
CLK1-211ENST00000481641 SPCS2Q15005 226 aa13.69□□□□□ -0.22
CLK1-211ENST00000481641 MLANAQ16655 118 aa13.69□□□□□ -0.22
CLK1-211ENST00000481641 STEAP1BQ6NZ63 245 aa13.69□□□□□ -0.22
CLK1-211ENST00000481641 TCF24Q7RTU0 167 aa13.69□□□□□ -0.22
CLK1-211ENST00000481641 KIR2DL5AQ8N109 375 aa13.69□□□□□ -0.22
CLK1-211ENST00000481641 DUSP18Q8NEJ0 188 aa13.69□□□□□ -0.22
CLK1-211ENST00000481641 KIR2DL5BQ8NHK3 375 aa13.69□□□□□ -0.22
CLK1-211ENST00000481641 ZFAND1Q8TCF1 268 aa13.69□□□□□ -0.22
CLK1-211ENST00000481641 ST8SIA2Q92186 375 aa13.69□□□□□ -0.22
CLK1-211ENST00000481641 MRPL36Q9P0J6 103 aaKnown RBP13.69□□□□□ -0.22
CLK1-211ENST00000481641 RGS5O15539 181 aa13.68□□□□□ -0.22
CLK1-211ENST00000481641 TMEM50AO95807 157 aa13.68□□□□□ -0.22
CLK1-211ENST00000481641 TBPP20226 339 aa13.68□□□□□ -0.22
CLK1-211ENST00000481641 NPBWR1P48145 328 aa13.68□□□□□ -0.22
CLK1-211ENST00000481641 HOXA1P49639 335 aaPredicted RBP13.68□□□□□ -0.22
CLK1-211ENST00000481641 TAS2R19P59542 299 aa13.68□□□□□ -0.22
CLK1-211ENST00000481641 TNFRSF9Q07011 255 aa13.68□□□□□ -0.22
CLK1-211ENST00000481641 Q6ZRM9 215 aa13.68□□□□□ -0.22
CLK1-211ENST00000481641 CCDC71LQ8N9Z2 235 aa13.68□□□□□ -0.22
CLK1-211ENST00000481641 PDCD10Q9BUL8 212 aa13.68□□□□□ -0.22
CLK1-211ENST00000481641 ZFAND3Q9H8U3 227 aa13.68□□□□□ -0.22
CLK1-211ENST00000481641 PUS1Q9Y606 427 aaKnown RBP eCLIP13.68□□□□□ -0.22
CLK1-211ENST00000481641 BIRC6Q9NR09 4857 aa13.68□□□□□ -0.22
CLK1-211ENST00000481641 A0A1B0GU03 582 aa13.67□□□□□ -0.22
CLK1-211ENST00000481641 INS-IGF2F8WCM5 200 aa13.67□□□□□ -0.22
CLK1-211ENST00000481641 UCP1P25874 307 aa13.67□□□□□ -0.22
CLK1-211ENST00000481641 PVRIGQ6DKI7 326 aa13.67□□□□□ -0.22
CLK1-211ENST00000481641 RNASE11Q8TAA1 199 aaKnown RBP13.67□□□□□ -0.22
CLK1-211ENST00000481641 FNDC4Q9H6D8 234 aaPredicted RBP13.67□□□□□ -0.22
CLK1-211ENST00000481641 GABARAPH6UMI1 98 aa13.66□□□□□ -0.22
CLK1-211ENST00000481641 DFFBO76075 338 aa13.66□□□□□ -0.22
CLK1-211ENST00000481641 ATG12O94817 140 aa13.66□□□□□ -0.22
CLK1-211ENST00000481641 OR5AC1P0C628 307 aa13.66□□□□□ -0.22
CLK1-211ENST00000481641 ALDH3B2P48448 385 aa13.66□□□□□ -0.22
CLK1-211ENST00000481641 ZNF600Q6ZNG1 722 aa13.66□□□□□ -0.22
CLK1-211ENST00000481641 GPR141Q7Z602 305 aa13.66□□□□□ -0.22
CLK1-211ENST00000481641 LHFPL5Q8TAF8 219 aa13.66□□□□□ -0.22
CLK1-211ENST00000481641 C15orf40Q8WUR7 153 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms