RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 IFNA10P01566 189 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 APOHP02749 345 aaPredicted RBP8.14□□□□□ -1.11
TTC28-206ENST00000480563 EIF4EP06730 217 aaKnown RBP8.14□□□□□ -1.11
TTC28-206ENST00000480563 SPP1P10451 314 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 PTHLHP12272 177 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 SDC2P34741 201 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 SCAND1P57086 179 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 ARPC4P59998 168 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 MXD1Q05195 221 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 SOHLH1Q5JUK2 328 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 SFXN4Q6P4A7 337 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 Q6ZR54 194 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 TRPT1Q86TN4 253 aaKnown RBP8.14□□□□□ -1.11
TTC28-206ENST00000480563 DUSP18Q8NEJ0 188 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 OR51H1Q8NH63 302 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 ST8SIA2Q92186 375 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 SLC25A46Q96AG3 418 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 YIPF6Q96EC8 236 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 VSIRQ9H7M9 311 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 DAPK2Q9UIK4 370 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 TBC1D24Q9ULP9 559 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 NSG2Q9Y328 171 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 OR51B2Q9Y5P1 312 aa8.14□□□□□ -1.11
TTC28-206ENST00000480563 IGHV3-66A0A0C4DH42 116 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 SMIM30A4D0T7 59 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 PPYP01298 95 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 IFNA21P01568 189 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 IFNA17P01571 189 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 C4BPBP20851 252 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 ERVK-16P61578 105 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 TOMM20LQ6UXN7 152 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 MAPKAPK5-AS1Q8N8E1 139 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 MISP3Q96FF7 219 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 TXN2Q99757 166 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 GINS3Q9BRX5 216 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 FUNDC2Q9BWH2 189 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 CLEC5AQ9NY25 188 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 COMMD9Q9P000 198 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 RABAC1Q9UI14 185 aa8.13□□□□□ -1.11
TTC28-206ENST00000480563 MARCH11A6NNE9 402 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 KNCNA6PVL3 124 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 I3L2K1 104 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 SNAPC5O75971 98 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 IGHV3-48P01763 117 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 NPY1RP25929 384 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 FXYD4P59646 89 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 LSM3P62310 102 aaKnown RBP8.12□□□□□ -1.11
TTC28-206ENST00000480563 IDNKQ5T6J7 187 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 AADACL3Q5VUY0 350 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 ZNF818PQ6ZRF7 136 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 UBE2DNLQ8IWF7 75 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 CSNK1G2-AS1Q8NCQ2 148 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 BEST4Q8NFU0 473 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 OR1P1Q8NH06 330 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 TMEM56Q96MV1 263 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 TMEM14BQ9NUH8 114 aa8.12□□□□□ -1.11
TTC28-206ENST00000480563 HSPG2P98160 4391 aa8.11□□□□□ -1.11
TTC28-206ENST00000480563 GNG7O60262 68 aa8.11□□□□□ -1.11
TTC28-206ENST00000480563 CDK2AP2O75956 126 aa8.11□□□□□ -1.11
TTC28-206ENST00000480563 GABARAPO95166 117 aa8.11□□□□□ -1.11
TTC28-206ENST00000480563 MT-CO2P00403 227 aa8.11□□□□□ -1.11
TTC28-206ENST00000480563 KRASP01116 189 aa8.11□□□□□ -1.11
TTC28-206ENST00000480563 CD74P04233 296 aa8.11□□□□□ -1.11
TTC28-206ENST00000480563 RPL5P46777 297 aaKnown RBP8.11□□□□□ -1.11
TTC28-206ENST00000480563 GPR107Q5VW38 600 aa8.11□□□□□ -1.11
TTC28-206ENST00000480563 Q6ZRM9 215 aa8.11□□□□□ -1.11
TTC28-206ENST00000480563 LGALS14Q8TCE9 139 aa8.11□□□□□ -1.11
TTC28-206ENST00000480563 AP3S1Q92572 193 aa8.11□□□□□ -1.11
TTC28-206ENST00000480563 RNF167Q9H6Y7 350 aa8.11□□□□□ -1.11
TTC28-206ENST00000480563 K7EQG2 157 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 ZNF688P0C7X2 276 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 F2RP25116 425 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 GNRHRP30968 328 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 LPAR6P43657 344 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 ALDH3B2P48448 385 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 ACTL10Q5JWF8 245 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 C1orf134Q5TEV5 83 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 TMEM17Q86X19 198 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 HOGA1Q86XE5 327 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 CADM3Q8N126 398 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 STXBP6Q8NFX7 210 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 RAB2BQ8WUD1 216 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 BCL7BQ9BQE9 202 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 TMEM231Q9H6L2 316 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 RHBDL2Q9NX52 303 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 FKBP11Q9NYL4 201 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 PRNDQ9UKY0 176 aa8.1□□□□□ -1.11
TTC28-206ENST00000480563 DBX1A6NMT0 343 aa8.09□□□□□ -1.11
TTC28-206ENST00000480563 C16orf90A8MZG2 172 aa8.09□□□□□ -1.11
TTC28-206ENST00000480563 FCER2P06734 321 aa8.09□□□□□ -1.11
TTC28-206ENST00000480563 CLEC2LP0C7M8 214 aa8.09□□□□□ -1.11
TTC28-206ENST00000480563 G6PCP35575 357 aa8.09□□□□□ -1.11
TTC28-206ENST00000480563 VBP1P61758 197 aa8.09□□□□□ -1.11
TTC28-206ENST00000480563 NCS1P62166 190 aa8.09□□□□□ -1.11
TTC28-206ENST00000480563 ZNF600Q6ZNG1 722 aa8.09□□□□□ -1.11
TTC28-206ENST00000480563 CLVS1Q8IUQ0 354 aaPredicted RBP8.09□□□□□ -1.11
TTC28-206ENST00000480563 FCAMRQ8WWV6 532 aa8.09□□□□□ -1.11
TTC28-206ENST00000480563 PINX1Q96BK5 328 aaKnown RBP8.09□□□□□ -1.11
TTC28-206ENST00000480563 MOB3AQ96BX8 217 aa8.09□□□□□ -1.11
TTC28-206ENST00000480563 GRAMD2BQ96HH9 432 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms