RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 RAB29O14966 203 aa13.77□□□□□ -0.21
SH3D21-203ENST00000480549 C1QTNF9P0C862 333 aa13.77□□□□□ -0.21
SH3D21-203ENST00000480549 ARL16Q0P5N6 197 aa13.77□□□□□ -0.21
SH3D21-203ENST00000480549 TRAV1-1A0A0B4J248 108 aa13.77□□□□□ -0.21
SH3D21-203ENST00000480549 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.77□□□□□ -0.21
SH3D21-203ENST00000480549 F2Z2F3 143 aa13.77□□□□□ -0.21
SH3D21-203ENST00000480549 TMEM178BH3BS89 294 aa13.77□□□□□ -0.21
SH3D21-203ENST00000480549 FCN3O75636 299 aa13.77□□□□□ -0.21
SH3D21-203ENST00000480549 GRNP28799 593 aaKnown RBP13.77□□□□□ -0.21
SH3D21-203ENST00000480549 SRP14P37108 136 aaKnown RBP13.77□□□□□ -0.21
SH3D21-203ENST00000480549 LINC00310P59036 64 aa13.77□□□□□ -0.21
SH3D21-203ENST00000480549 ANAPC16Q96DE5 110 aa13.77□□□□□ -0.21
SH3D21-203ENST00000480549 SLC35D1Q9NTN3 355 aa13.77□□□□□ -0.21
SH3D21-203ENST00000480549 VSTM5A8MXK1 200 aa13.76□□□□□ -0.21
SH3D21-203ENST00000480549 TSPOP30536 169 aa13.76□□□□□ -0.21
SH3D21-203ENST00000480549 CT45A1Q5HYN5 189 aa13.76□□□□□ -0.21
SH3D21-203ENST00000480549 CT45A3Q8NHU0 189 aa13.76□□□□□ -0.21
SH3D21-203ENST00000480549 RAB9BQ9NP90 201 aa13.76□□□□□ -0.21
SH3D21-203ENST00000480549 TMPRSS2O15393 492 aa13.76□□□□□ -0.21
SH3D21-203ENST00000480549 ZNF439Q8NDP4 499 aa13.76□□□□□ -0.21
SH3D21-203ENST00000480549 LINC01560Q8TB33 94 aa13.76□□□□□ -0.21
SH3D21-203ENST00000480549 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.76□□□□□ -0.21
SH3D21-203ENST00000480549 HCFC1P51610 2035 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 TRAV38-1A0A0B4J264 116 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 M0R1X1 148 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 SAP30O75446 220 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 ADORA2A-AS1P86434 159 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 CDSNQ15517 529 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 CENPVQ7Z7K6 275 aaPredicted RBP13.75□□□□□ -0.21
SH3D21-203ENST00000480549 SIGLECL1Q8N7X8 197 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 PLAUP00749 431 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 IFNA1P01562 189 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 IDI2-AS1Q9NZ38 188 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 ROS1P08922 2347 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 NDUFS8O00217 210 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 TNFRSF13BO14836 293 aaPredicted RBP13.75□□□□□ -0.21
SH3D21-203ENST00000480549 FCGR3BO75015 233 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 IFNA5P01569 189 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 CD3EP07766 207 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 CRISP2P16562 243 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 EFNB3Q15768 340 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 H2BFWTQ7Z2G1 175 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 DDB2Q92466 427 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 ARFGEF3Q5TH69 2177 aa13.75□□□□□ -0.21
SH3D21-203ENST00000480549 PPIAL4EA0A075B759 164 aa13.74□□□□□ -0.21
SH3D21-203ENST00000480549 PPIAL4DF5H284 164 aa13.74□□□□□ -0.21
SH3D21-203ENST00000480549 PPIAL4FP0DN26 164 aa13.74□□□□□ -0.21
SH3D21-203ENST00000480549 APOBEC3AP31941 199 aaPredicted RBP13.74□□□□□ -0.21
SH3D21-203ENST00000480549 MEF2BQ02080 365 aaPredicted RBP13.74□□□□□ -0.21
SH3D21-203ENST00000480549 SPANXN5Q5MJ07 72 aa13.74□□□□□ -0.21
SH3D21-203ENST00000480549 TMEM14EPQ6UXP3 125 aa13.74□□□□□ -0.21
SH3D21-203ENST00000480549 NIT1Q86X76 327 aa13.74□□□□□ -0.21
SH3D21-203ENST00000480549 ZNF525Q8N782 197 aa13.74□□□□□ -0.21
SH3D21-203ENST00000480549 OR4F5Q8NH21 305 aa13.74□□□□□ -0.21
SH3D21-203ENST00000480549 CCL17Q92583 94 aa13.74□□□□□ -0.21
SH3D21-203ENST00000480549 OR4F4Q96R69 305 aa13.74□□□□□ -0.21
SH3D21-203ENST00000480549 ZNF586Q9NXT0 402 aa13.74□□□□□ -0.21
SH3D21-203ENST00000480549 SLC25A10Q9UBX3 287 aaPredicted RBP13.74□□□□□ -0.21
SH3D21-203ENST00000480549 DYNLRB1Q9NP97 96 aa13.73□□□□□ -0.21
SH3D21-203ENST00000480549 SAA2-SAA4A0A096LPE2 208 aa13.73□□□□□ -0.21
SH3D21-203ENST00000480549 RBFOX2O43251 390 aaKnown RBP eCLIP13.73□□□□□ -0.212e-7■■■■■ 42.4
SH3D21-203ENST00000480549 SAA2P0DJI9 122 aaPredicted RBP13.73□□□□□ -0.21
SH3D21-203ENST00000480549 Q8N976 141 aa13.73□□□□□ -0.21
SH3D21-203ENST00000480549 LINC00312Q9Y6C7 94 aa13.73□□□□□ -0.21
SH3D21-203ENST00000480549 OR9G9P0C7N8 305 aa13.73□□□□□ -0.21
SH3D21-203ENST00000480549 LCN2P80188 198 aa13.73□□□□□ -0.21
SH3D21-203ENST00000480549 AMMECR1LQ6DCA0 310 aa13.73□□□□□ -0.21
SH3D21-203ENST00000480549 LHX4Q969G2 390 aa13.73□□□□□ -0.21
SH3D21-203ENST00000480549 MS4A5Q9H3V2 200 aa13.73□□□□□ -0.21
SH3D21-203ENST00000480549 hADV38S2A0JD32 116 aa13.72□□□□□ -0.21
SH3D21-203ENST00000480549 CBLN1P23435 193 aa13.72□□□□□ -0.21
SH3D21-203ENST00000480549 PRAMEF5Q5TYX0 476 aa13.72□□□□□ -0.21
SH3D21-203ENST00000480549 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.72□□□□□ -0.21
SH3D21-203ENST00000480549 GATAD1Q8WUU5 269 aa13.72□□□□□ -0.21
SH3D21-203ENST00000480549 ZDHHC16Q969W1 377 aa13.72□□□□□ -0.21
SH3D21-203ENST00000480549 OR4C12Q96R67 309 aa13.72□□□□□ -0.21
SH3D21-203ENST00000480549 RPUSD1Q9UJJ7 312 aaKnown RBP13.72□□□□□ -0.21
SH3D21-203ENST00000480549 ZG16O60844 167 aa13.72□□□□□ -0.21
SH3D21-203ENST00000480549 TMEM30BQ3MIR4 351 aa13.72□□□□□ -0.21
SH3D21-203ENST00000480549 SCGB1C1Q8TD33 95 aa13.72□□□□□ -0.21
SH3D21-203ENST00000480549 OR2T8A6NH00 312 aa13.71□□□□□ -0.21
SH3D21-203ENST00000480549 B9A039 149 aa13.71□□□□□ -0.21
SH3D21-203ENST00000480549 LYPD2Q6UXB3 125 aa13.71□□□□□ -0.21
SH3D21-203ENST00000480549 PKDREJQ9NTG1 2253 aa13.71□□□□□ -0.21
SH3D21-203ENST00000480549 GAGE12BA1L429 117 aa13.71□□□□□ -0.21
SH3D21-203ENST00000480549 CFAP161Q6P656 301 aa13.71□□□□□ -0.21
SH3D21-203ENST00000480549 KLHDC1Q8N7A1 406 aa13.71□□□□□ -0.21
SH3D21-203ENST00000480549 QTRT1Q9BXR0 403 aaKnown RBP13.71□□□□□ -0.21
SH3D21-203ENST00000480549 SELENOKQ9Y6D0 94 aa13.71□□□□□ -0.21
SH3D21-203ENST00000480549 ATRXP46100 2492 aa13.71□□□□□ -0.22
SH3D21-203ENST00000480549 CORTO00230 105 aa13.71□□□□□ -0.22
SH3D21-203ENST00000480549 PMCHP20382 165 aa13.71□□□□□ -0.22
SH3D21-203ENST00000480549 HBG1P69891 147 aa13.71□□□□□ -0.22
SH3D21-203ENST00000480549 HBG2P69892 147 aa13.71□□□□□ -0.22
SH3D21-203ENST00000480549 RHOGP84095 191 aa13.71□□□□□ -0.22
SH3D21-203ENST00000480549 MEF2CQ06413 473 aaPredicted RBP13.71□□□□□ -0.22
SH3D21-203ENST00000480549 MBD3L1Q8WWY6 194 aa13.71□□□□□ -0.22
SH3D21-203ENST00000480549 S1PR3Q99500 378 aa13.71□□□□□ -0.22
SH3D21-203ENST00000480549 TBL2Q9Y4P3 447 aaKnown RBP13.71□□□□□ -0.22
SH3D21-203ENST00000480549 IGHV1-69-2A0A0G2JMI3 117 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms