RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 MAP1LC3BQ9GZQ8 125 aa8.77□□□□□ -1.01
VTI1A-204ENST00000480057 VSIRQ9H7M9 311 aa8.77□□□□□ -1.01
VTI1A-204ENST00000480057 SLC45A2Q9UMX9 530 aa8.77□□□□□ -1.01
VTI1A-204ENST00000480057 SPTAN1Q13813 2472 aaKnown RBP8.77□□□□□ -1.01
VTI1A-204ENST00000480057 FAM208BQ5VWN6 2430 aa8.76□□□□□ -1.01
VTI1A-204ENST00000480057 RBFOX3A6NFN3 312 aa8.76□□□□□ -1.01
VTI1A-204ENST00000480057 NPIPB5A8MRT5 1133 aa8.76□□□□□ -1.01
VTI1A-204ENST00000480057 FCN1O00602 326 aa8.76□□□□□ -1.01
VTI1A-204ENST00000480057 HLA-DRB1P01911 266 aa8.76□□□□□ -1.01
VTI1A-204ENST00000480057 HSPB1P04792 205 aaKnown RBP8.76□□□□□ -1.01
VTI1A-204ENST00000480057 CTRB1P17538 263 aa8.76□□□□□ -1.01
VTI1A-204ENST00000480057 CDC34P49427 236 aaPredicted RBP8.76□□□□□ -1.01
VTI1A-204ENST00000480057 B2MP61769 119 aa8.76□□□□□ -1.01
VTI1A-204ENST00000480057 SELENOTP62341 195 aa8.76□□□□□ -1.01
VTI1A-204ENST00000480057 SRSF3P84103 164 aaKnown RBP8.76□□□□□ -1.01
VTI1A-204ENST00000480057 FXYD3Q14802 87 aa8.76□□□□□ -1.01
VTI1A-204ENST00000480057 KHDC3LQ587J8 217 aa8.76□□□□□ -1.01
VTI1A-204ENST00000480057 CTRB2Q6GPI1 263 aa8.76□□□□□ -1.01
VTI1A-204ENST00000480057 Q8N9W7 124 aa8.76□□□□□ -1.01
VTI1A-204ENST00000480057 C17orf50Q8WW18 174 aa8.76□□□□□ -1.01
VTI1A-204ENST00000480057 EIF5A2Q9GZV4 153 aaKnown RBP8.76□□□□□ -1.01
VTI1A-204ENST00000480057 C7orf69Q9H7B7 122 aa8.76□□□□□ -1.01
VTI1A-204ENST00000480057 HIF1ANQ9NWT6 349 aa8.76□□□□□ -1.01
VTI1A-204ENST00000480057 TRAV40A0A0B4J280 105 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 F8W036 122 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 YIF1AO95070 293 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 SFTA3P0C7M3 94 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 AREGP15514 252 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 COL8A1P27658 744 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 PSMB3P49720 205 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 KRTAP10-9P60411 292 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 CCL20P78556 96 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 HNF4GQ14541 408 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 FAM122CQ6P4D5 195 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 LCN15Q6UWW0 184 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 RBMS3Q6XE24 437 aaKnown RBP8.75□□□□□ -1.01
VTI1A-204ENST00000480057 SVBPQ8N300 66 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 STPG3Q8N7X2 389 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 TMEM116Q8NCL8 245 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 SSMEM1Q8WWF3 244 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 ARPC1AQ92747 370 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 TMEM68Q96MH6 324 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 SLC35B3Q9H1N7 401 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 FNDC4Q9H6D8 234 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-204ENST00000480057 MANBALQ9NQG1 85 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 FAM96BQ9Y3D0 163 aa8.75□□□□□ -1.01
VTI1A-204ENST00000480057 AKAP6Q13023 2319 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 LOC102723971A0A1B0GUV8 181 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 A0A1W2PPV4 95 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 NCBP2LA6PVI3 153 aaKnown RBP8.74□□□□□ -1.01
VTI1A-204ENST00000480057 MT-CO2P00403 227 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 FBP1P09467 338 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 LINC00869P0C866 280 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 BCL2P10415 239 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 CD24P25063 80 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 MFAP2P55001 183 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 RHOBP62745 196 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 CX3CL1P78423 397 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 KLK9Q2XQG4 91 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 Q5PR19 223 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 MIC13Q5XKP0 118 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 CYP2G1PQ6ZSU1 146 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 SSX7Q7RTT5 188 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 TTC9CQ8N5M4 171 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 ABHD5Q8WTS1 349 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 RAB24Q969Q5 203 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 RNF2Q99496 336 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 TRGV9Q99603 122 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 RASL11BQ9BPW5 248 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 TMEM231Q9H6L2 316 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 KLK9Q9UKQ9 250 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 ABCA2Q9BZC7 2435 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 LRRK2Q5S007 2527 aa8.74□□□□□ -1.01
VTI1A-204ENST00000480057 COL12A1Q99715 3063 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 IGKV1OR2-108A0A075B7D4 117 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 IGHV7-81A0A0B4J1V7 117 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 TCRBV4S1A1TA0A5B7 111 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 APOC3P02656 99 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 REG1AP05451 166 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 STAG3L2P0CL84 134 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 STAG3L3P0CL85 134 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 ADCYAP1P18509 176 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 OR10J1P30954 320 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 ICAM4Q14773 271 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 FAM120AOSQ5T036 256 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 RUSC1-AS1Q66K80 236 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 SLC35E3Q7Z769 313 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 OR2T6Q8NHC8 308 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 NANPQ8TBE9 248 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 MISP3Q96FF7 219 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 ACY3Q96HD9 319 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 RBM14Q96PK6 669 aaKnown RBP8.73□□□□□ -1.01
VTI1A-204ENST00000480057 MRPL32Q9BYC8 188 aaKnown RBP8.73□□□□□ -1.01
VTI1A-204ENST00000480057 WNT10AQ9GZT5 417 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 SLC25A22Q9H936 323 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 VAX2Q9UIW0 290 aa8.73□□□□□ -1.01
VTI1A-204ENST00000480057 A0A1B0GV50 99 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 C9JQL5 133 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 I3L2K1 104 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 SNAPINO95295 136 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms