RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	NPIPB5	A8MRT5	1133 aa		11.91	□□□□□ -0.5
HDLBP-238	ENST00000479894	SSNA1	O43805	119 aa		11.91	□□□□□ -0.5
HDLBP-238	ENST00000479894	ATP5I	P56385	69 aa	Predicted RBP	11.91	□□□□□ -0.5
HDLBP-238	ENST00000479894	OXA1L	Q15070	435 aa		11.91	□□□□□ -0.5
HDLBP-238	ENST00000479894	HAGH	Q16775	308 aa		11.91	□□□□□ -0.5
HDLBP-238	ENST00000479894	FAM209B	Q5JX69	171 aa		11.91	□□□□□ -0.5
HDLBP-238	ENST00000479894	GGNBP1	Q5YKI7	109 aa		11.91	□□□□□ -0.5
HDLBP-238	ENST00000479894	ZNF491	Q8N8L2	437 aa		11.91	□□□□□ -0.5
HDLBP-238	ENST00000479894	SEC22C	Q9BRL7	303 aa		11.91	□□□□□ -0.5
HDLBP-238	ENST00000479894	HIPK2	Q9H2X6	1198 aa		11.91	□□□□□ -0.5
HDLBP-238	ENST00000479894	THYN1	Q9P016	225 aa		11.91	□□□□□ -0.5
HDLBP-238	ENST00000479894	NSG2	Q9Y328	171 aa		11.91	□□□□□ -0.5
HDLBP-238	ENST00000479894		A0A0G2JLM5	398 aa		11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	DBX1	A6NMT0	343 aa		11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	INS-IGF2	F8WCM5	200 aa		11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	EGR2	P11161	476 aa	Predicted RBP	11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	DEFA4	P12838	97 aa		11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	SNCA	P37840	140 aa		11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	RPP30	P78346	268 aa	Known RBP	11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	CYCS	P99999	105 aa	Known RBP	11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	NDP	Q00604	133 aa		11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	KIAA0141	Q14154	515 aa	Predicted RBP	11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	TATDN3	Q17R31	274 aa		11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	KIAA1109	Q2LD37	5005 aa		11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	GSG1L	Q6UXU4	331 aa		11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	OR52B4	Q8NGK2	314 aa		11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	CIB3	Q96Q77	187 aa	Predicted RBP	11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	FAM103A1	Q9BTL3	118 aa	Known RBP	11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	GNB4	Q9HAV0	340 aa		11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	ZNF355P	Q9NSJ1	428 aa		11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894	PRR13	Q9NZ81	148 aa		11.9	□□□□□ -0.5
HDLBP-238	ENST00000479894		G3V318	75 aa		11.89	□□□□□ -0.51
HDLBP-238	ENST00000479894	ST8SIA3	O43173	380 aa		11.89	□□□□□ -0.51
HDLBP-238	ENST00000479894	LY6G6C	O95867	125 aa		11.89	□□□□□ -0.51
HDLBP-238	ENST00000479894	IGLV1-40	P01703	118 aa		11.89	□□□□□ -0.51
HDLBP-238	ENST00000479894	CRYGC	P07315	174 aa		11.89	□□□□□ -0.51
HDLBP-238	ENST00000479894	PSMB6	P28072	239 aa		11.89	□□□□□ -0.51
HDLBP-238	ENST00000479894	PPIF	P30405	207 aa	Known RBP	11.89	□□□□□ -0.51
HDLBP-238	ENST00000479894	SSBP2	P81877	361 aa	Predicted RBP	11.89	□□□□□ -0.51
HDLBP-238	ENST00000479894	IAH1	Q2TAA2	248 aa	Predicted RBP	11.89	□□□□□ -0.51
HDLBP-238	ENST00000479894	DLX4	Q92988	240 aa	Predicted RBP	11.89	□□□□□ -0.51
HDLBP-238	ENST00000479894	C13orf42	A0A1B0GVH6	325 aa		11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894	C7orf66	A4D0T2	115 aa		11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894	C5orf51	A6NDU8	294 aa		11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894	CEBPZOS	A8MTT3	80 aa		11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894	TEX22	C9J3V5	150 aa		11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894	WRB	O00258	174 aa		11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894	OR13C7	P0DN81	318 aa		11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894	HOXA1	P49639	335 aa	Predicted RBP	11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894	C19orf54	Q5BKX5	351 aa		11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894		Q6ZRM9	215 aa		11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894	OR5T1	Q8NG75	326 aa		11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894	GATAD1	Q8WUU5	269 aa		11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894	USMG5	Q96IX5	58 aa		11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894	HEYL	Q9NQ87	328 aa	Predicted RBP	11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894	HSPB7	Q9UBY9	170 aa		11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894	FBXO7	Q9Y3I1	522 aa		11.88	□□□□□ -0.51
HDLBP-238	ENST00000479894	MUC4	Q99102	2169 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894		A0A0G2JRQ6	117 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894	IGLC7	A0M8Q6	106 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894	FAM223B	A6NKX1	122 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894	FAM25E	A8MYX2	175 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894	CORT	O00230	105 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894	PITX3	O75364	302 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894	HTR2B	P41595	481 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894	TNFRSF9	Q07011	255 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894	IZUMO4	Q1ZYL8	232 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894	C10orf55	Q5SWW7	151 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894	FAM223A	Q8IWN6	122 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894	NECAP1	Q8NC96	275 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894	C2orf50	Q96LR7	162 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894	OR4C12	Q96R67	309 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894		U3KQ87	197 aa		11.87	□□□□□ -0.51
HDLBP-238	ENST00000479894	HMX3	A6NHT5	357 aa		11.86	□□□□□ -0.51
HDLBP-238	ENST00000479894	ADAP1	O75689	374 aa		11.86	□□□□□ -0.51
HDLBP-238	ENST00000479894	TRGV3	P03979	118 aa		11.86	□□□□□ -0.51
HDLBP-238	ENST00000479894	CTRB1	P17538	263 aa		11.86	□□□□□ -0.51
HDLBP-238	ENST00000479894	NKX2-1	P43699	371 aa	Predicted RBP	11.86	□□□□□ -0.51
HDLBP-238	ENST00000479894	RAB9A	P51151	201 aa		11.86	□□□□□ -0.51
HDLBP-238	ENST00000479894	CTRB2	Q6GPI1	263 aa		11.86	□□□□□ -0.51
HDLBP-238	ENST00000479894	OR2C3	Q8N628	320 aa		11.86	□□□□□ -0.51
HDLBP-238	ENST00000479894	ZNF114	Q8NC26	417 aa		11.86	□□□□□ -0.51
HDLBP-238	ENST00000479894	OR1P1	Q8NH06	330 aa		11.86	□□□□□ -0.51
HDLBP-238	ENST00000479894	ASB13	Q8WXK3	278 aa		11.86	□□□□□ -0.51
HDLBP-238	ENST00000479894	MED28	Q9H204	178 aa		11.86	□□□□□ -0.51
HDLBP-238	ENST00000479894	KLK15	Q9H2R5	256 aa		11.86	□□□□□ -0.51
HDLBP-238	ENST00000479894	GSKIP	Q9P0R6	139 aa		11.86	□□□□□ -0.51
HDLBP-238	ENST00000479894	LINC01619	G3V211	115 aa		11.85	□□□□□ -0.51
HDLBP-238	ENST00000479894	AREG	P15514	252 aa		11.85	□□□□□ -0.51
HDLBP-238	ENST00000479894	PVALB	P20472	110 aa	Predicted RBP	11.85	□□□□□ -0.51
HDLBP-238	ENST00000479894	SLURP1	P55000	103 aa		11.85	□□□□□ -0.51
HDLBP-238	ENST00000479894	TPPP2	P59282	170 aa		11.85	□□□□□ -0.51
HDLBP-238	ENST00000479894	ID3	Q02535	119 aa		11.85	□□□□□ -0.51
HDLBP-238	ENST00000479894	KLK9	Q2XQG4	91 aa		11.85	□□□□□ -0.51
HDLBP-238	ENST00000479894	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.85	□□□□□ -0.51
HDLBP-238	ENST00000479894	DTD1	Q8TEA8	209 aa		11.85	□□□□□ -0.51
HDLBP-238	ENST00000479894	CXorf58	Q96LI9	332 aa		11.85	□□□□□ -0.51
HDLBP-238	ENST00000479894	KLK9	Q9UKQ9	250 aa		11.85	□□□□□ -0.51
HDLBP-238	ENST00000479894	F11R	Q9Y624	299 aa	Known RBP	11.85	□□□□□ -0.51
HDLBP-238	ENST00000479894	ALG5	Q9Y673	324 aa		11.85	□□□□□ -0.51

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