RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 IGHV1-69DA0A0B4J2H0 117 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 IGHV3-64DA0A0J9YX35 117 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 AKR7A2O43488 359 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 FCN3O75636 299 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 RPP14O95059 124 aaKnown RBP3.46□□□□□ -1.86
UPF3A-205ENST00000479712 IGHV1-69P01742 117 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 RBP4P02753 201 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 LIMS3P0CW19 117 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 LIMS4P0CW20 117 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 PSG2P11465 335 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 ATF1P18846 271 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 MAS1LP35410 378 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 TGFBR2P37173 567 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 CXCL5P42830 114 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 KIR3DL2P43630 455 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 HAAOP46952 286 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 RBP2P50120 134 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 OR12D2P58182 307 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 KRTAP10-5P60370 271 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 MXD1Q05195 221 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 SPIN3Q5JUX0 258 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 ZNF691Q5VV52 312 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 LGALS9CQ6DKI2 356 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 RPL22L1Q6P5R6 122 aaKnown RBP3.46□□□□□ -1.86
UPF3A-205ENST00000479712 HAGHLQ6PII5 290 aaPredicted RBP3.46□□□□□ -1.86
UPF3A-205ENST00000479712 TMPRSS11AQ6ZMR5 421 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 MKXQ8IYA7 352 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 FAM216BQ8N7L0 139 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 OR52N1Q8NH53 320 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 APH1BQ8WW43 257 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 BORCS8Q96FH0 119 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 FAM210BQ96KR6 192 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 CEP19Q96LK0 163 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 TBX5Q99593 518 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 CCL13Q99616 98 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 VCXQ9H320 206 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 METTL8Q9H825 291 aaKnown RBP3.46□□□□□ -1.86
UPF3A-205ENST00000479712 ST3GAL6Q9Y274 331 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 DNAH5Q8TE73 4624 aa3.46□□□□□ -1.86
UPF3A-205ENST00000479712 IGHV3OR15-7A0A075B7D8 119 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 TRBV6-6A0A0A6YYG2 114 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 IGKV1-9A0A0C4DH69 117 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 CENPVL3A0A0U1RRI6 287 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 PLAC8L1A1L4L8 177 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 EFCAB10A6NFE3 127 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 RNASEK-C17orf49H0YIS7 233 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 J3QLW9 94 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 MAGEB4O15481 346 aaPredicted RBP3.45□□□□□ -1.86
UPF3A-205ENST00000479712 NUPL2O15504 423 aaKnown RBP3.45□□□□□ -1.86
UPF3A-205ENST00000479712 SYNGR1O43759 233 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 AIREO43918 545 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 ZNF737O75373 536 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 CA11O75493 328 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 CYB5AP00167 134 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 IGLV2-23P01705 113 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 CD2P06729 351 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 SERPINE2P07093 398 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 MYL12AP19105 171 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 ERP29P30040 261 aaKnown RBP3.45□□□□□ -1.86
UPF3A-205ENST00000479712 GPX4P36969 197 aaPredicted RBP3.45□□□□□ -1.86
UPF3A-205ENST00000479712 UBE2E1P51965 193 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 TAS2R43P59537 309 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 MEF2CQ06413 473 aaPredicted RBP3.45□□□□□ -1.86
UPF3A-205ENST00000479712 CDK5R1Q15078 307 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 ZNF726P1Q15940 193 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 ELP2Q6IA86 826 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 TEX43Q6ZNM6 134 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 C8orf59Q8N0T1 100 aaPredicted RBP3.45□□□□□ -1.86
UPF3A-205ENST00000479712 STPG2Q8N412 459 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 JAGN1Q8N5M9 183 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 ZNF676Q8N7Q3 588 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 CHST4Q8NCG5 386 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 C19orf18Q8NEA5 215 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 PXT1Q8NFP0 134 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 OR5D14Q8NGL3 314 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 OR9G4Q8NGQ1 327 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 OR4S2Q8NH73 311 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 OR5AK2Q8NH90 309 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 TNFRSF14Q92956 283 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 ADAT3Q96EY9 351 aaPredicted RBP3.45□□□□□ -1.86
UPF3A-205ENST00000479712 OPALINQ96PE5 141 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 NABP2Q9BQ15 211 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 TTTY10Q9BZA0 68 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 ZNF331Q9NQX6 463 aaPredicted RBP3.45□□□□□ -1.86
UPF3A-205ENST00000479712 BABAM2Q9NXR7 383 aa3.45□□□□□ -1.86
UPF3A-205ENST00000479712 IGKV1-27A0A075B6S5 117 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 FUOMA2VDF0 154 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 RFPL4AA6NLU0 287 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 C17orf98A8MV24 154 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 RFPL4AL1F8VTS6 287 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 SULT1B1O43704 296 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 RAB3DO95716 219 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 CSN2P05814 226 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 FBP1P09467 338 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 GNAO1P09471 354 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 GABRA2P47869 451 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 KCNJ3P48549 501 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 HSPA13P48723 471 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 CCR6P51684 374 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 ARF6P62330 175 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms