RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ZNF736B4DX44 427 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-209ENST00000479532 BUB1B-PAK6H3BSN5 160 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 J3KRW8 73 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 RAB29O14966 203 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 TCF21O43680 179 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 JTBO76095 146 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 YIF1AO95070 293 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 OR2C1O95371 312 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 IGHV3-7P01780 117 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 IFNA6P05013 189 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 NPSP0C0P6 89 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 NBEAP1P0C6P0 100 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 PTHLHP12272 177 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 S100GP29377 79 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 BRS3P32247 399 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 PPP1CCP36873 323 aaKnown RBP4.98□□□□□ -1.61
SF3B1-209ENST00000479532 GPR12P47775 334 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 DLX1P56177 255 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 FAM3BP58499 235 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-209ENST00000479532 TAS2R31P59538 309 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 HERV-K104P61576 105 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 PRB3Q04118 309 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-209ENST00000479532 CLINT1Q14677 625 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 MEF2DQ14814 521 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 GUK1Q16774 197 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 MAJINQ3KP22 176 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 TPTE2P1Q5T6R2 138 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 GGNBP1Q5YKI7 109 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 HCP5Q6MZN7 132 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 SLC25A48Q6ZT89 311 aaKnown RBP4.98□□□□□ -1.61
SF3B1-209ENST00000479532 Q6ZWC4 215 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 SSX7Q7RTT5 188 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 C5orf24Q7Z6I8 188 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 SLC35E3Q7Z769 313 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 LYG1Q8N1E2 194 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 GVQW1Q8N7I0 195 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 TMEM229BQ8NBD8 167 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 OR8U1Q8NH10 309 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 OR52I2Q8NH67 350 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 MITD1Q8WV92 249 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 NPIPB3Q92617 1050 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 LEAP2Q969E1 77 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 S1PR3Q99500 378 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 PHB2Q99623 299 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 SLC6A7Q99884 636 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 SLC25A31Q9H0C2 315 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 CSTL1Q9H114 145 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 SLC35B3Q9H1N7 401 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 LYRM2Q9NU23 88 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-209ENST00000479532 EHFQ9NZC4 300 aa4.98□□□□□ -1.61
SF3B1-209ENST00000479532 A0A0U1RQK1 487 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 C20orf202A1L168 122 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 TMEM238C9JI98 176 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 HSD17B6O14756 317 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 IGLV1-47P01700 117 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 PMP2P02689 132 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 SEC11BP0C7V7 166 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 SNCAP37840 140 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 NDUFA6P56556 154 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 GNMTQ14749 295 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 HERPUD1Q15011 391 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 LRRC75BQ2VPJ9 315 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 DEFB112Q30KQ8 113 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 CT45A1Q5HYN5 189 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 FAM71F2Q6NXP2 309 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 Q6ZPA2 131 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 LINC01551Q86U37 167 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 FOXRED2Q8IWF2 684 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 H1FOOQ8IZA3 346 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-209ENST00000479532 FAM24BQ8N5W8 94 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 TMEM86BQ8N661 226 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 SIGLECL1Q8N7X8 197 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-209ENST00000479532 OR51S1Q8NGJ8 323 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 OR4P4Q8NGL7 312 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 CT45A3Q8NHU0 189 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 PPP1R1CQ8WVI7 109 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 SSMEM1Q8WWF3 244 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 TMEM18Q96B42 140 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 CYYR1Q96J86 154 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 OR2D2Q9H210 308 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 ARV1Q9H2C2 271 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 WFDC1Q9HC57 220 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 RAB18Q9NP72 206 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 CYTL1Q9NRR1 136 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 FAM212BQ9NTI7 297 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-209ENST00000479532 OR1A1Q9P1Q5 309 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 ZNRD1Q9P1U0 126 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 HSPB7Q9UBY9 170 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 ANAPC10Q9UM13 185 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 OR2W1Q9Y3N9 320 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 HILPDAQ9Y5L2 63 aa4.97□□□□□ -1.61
SF3B1-209ENST00000479532 MAP1AP78559 2803 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-209ENST00000479532 ACANP16112 2415 aa4.96□□□□□ -1.61
SF3B1-209ENST00000479532 CELSR1Q9NYQ6 3014 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 IGKV1-6A0A0C4DH72 117 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 PHOX2AO14813 284 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 DUS4LO95620 317 aaKnown RBP4.96□□□□□ -1.62
SF3B1-209ENST00000479532 OR8U9P0C7N5 309 aa4.96□□□□□ -1.62
SF3B1-209ENST00000479532 FAM106CPP0CH98 169 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms