RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 RHPN1-AS1Q9BWJ2 59 aa12.88□□□□□ -0.35
ECHDC1-216ENST00000479525 SMPXQ9UHP9 88 aa12.88□□□□□ -0.35
ECHDC1-216ENST00000479525 IGHV7-4-1A0A0J9YVY3 117 aa12.87□□□□□ -0.35
ECHDC1-216ENST00000479525 CHEK1O14757 476 aa12.87□□□□□ -0.35
ECHDC1-216ENST00000479525 ZNF182P17025 639 aaPredicted RBP12.87□□□□□ -0.35
ECHDC1-216ENST00000479525 ETV6P41212 452 aa12.87□□□□□ -0.35
ECHDC1-216ENST00000479525 MLANAQ16655 118 aa12.87□□□□□ -0.35
ECHDC1-216ENST00000479525 LAMTOR1Q6IAA8 161 aa12.87□□□□□ -0.35
ECHDC1-216ENST00000479525 TMEM116Q8NCL8 245 aa12.87□□□□□ -0.35
ECHDC1-216ENST00000479525 OR13C8Q8NGS7 320 aa12.87□□□□□ -0.35
ECHDC1-216ENST00000479525 IL17DQ8TAD2 202 aa12.87□□□□□ -0.35
ECHDC1-216ENST00000479525 MARCH1Q8TCQ1 289 aa12.87□□□□□ -0.35
ECHDC1-216ENST00000479525 MRPL36Q9P0J6 103 aaKnown RBP12.87□□□□□ -0.35
ECHDC1-216ENST00000479525 A0A0B4J293 547 aa12.86□□□□□ -0.35
ECHDC1-216ENST00000479525 CTDSP2O14595 271 aa12.86□□□□□ -0.35
ECHDC1-216ENST00000479525 GNG7O60262 68 aa12.86□□□□□ -0.35
ECHDC1-216ENST00000479525 IFNA17P01571 189 aa12.86□□□□□ -0.35
ECHDC1-216ENST00000479525 SPCS2Q15005 226 aa12.86□□□□□ -0.35
ECHDC1-216ENST00000479525 TRIM16LQ309B1 348 aa12.86□□□□□ -0.35
ECHDC1-216ENST00000479525 LILRB2Q8N423 598 aa12.86□□□□□ -0.35
ECHDC1-216ENST00000479525 SLC35G3Q8N808 338 aa12.86□□□□□ -0.35
ECHDC1-216ENST00000479525 MTFP1Q9UDX5 166 aa12.86□□□□□ -0.35
ECHDC1-216ENST00000479525 AGRNO00468 2067 aa12.86□□□□□ -0.35
ECHDC1-216ENST00000479525 C3orf85A0A1B0GTC6 90 aa12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 C15orf62A8K5M9 175 aa12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 K7EMT4 169 aa12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 RGS5O15539 181 aa12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 SPRY2O43597 315 aa12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 JTBO76095 146 aa12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 NXPH3O95157 252 aa12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 P0C879 139 aa12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 RND3P61587 244 aa12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 ERHP84090 104 aaKnown RBP12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 LYG2Q86SG7 212 aa12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 CADM3Q8N126 398 aa12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 ST8SIA2Q92186 375 aa12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 NXF2Q9GZY0 626 aaKnown RBP12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 FAM212BQ9NTI7 297 aaPredicted RBP12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 COPZ2Q9P299 210 aa12.85□□□□□ -0.35
ECHDC1-216ENST00000479525 CXorf65A6NEN9 183 aa12.84□□□□□ -0.35
ECHDC1-216ENST00000479525 OR4C46A6NHA9 309 aa12.84□□□□□ -0.35
ECHDC1-216ENST00000479525 RAB3DO95716 219 aa12.84□□□□□ -0.35
ECHDC1-216ENST00000479525 HOXA1P49639 335 aaPredicted RBP12.84□□□□□ -0.35
ECHDC1-216ENST00000479525 RELQ04864 619 aaPredicted RBP12.84□□□□□ -0.35
ECHDC1-216ENST00000479525 TOMM20LQ6UXN7 152 aa12.84□□□□□ -0.35
ECHDC1-216ENST00000479525 ZNF114Q8NC26 417 aa12.84□□□□□ -0.35
ECHDC1-216ENST00000479525 RNASE11Q8TAA1 199 aaKnown RBP12.84□□□□□ -0.35
ECHDC1-216ENST00000479525 AP3S1Q92572 193 aa12.84□□□□□ -0.35
ECHDC1-216ENST00000479525 PRR13Q9NZ81 148 aa12.84□□□□□ -0.35
ECHDC1-216ENST00000479525 RNASE2P10153 161 aaKnown RBP12.83□□□□□ -0.36
ECHDC1-216ENST00000479525 APOC4P55056 127 aa12.83□□□□□ -0.36
ECHDC1-216ENST00000479525 STEAP1BQ6NZ63 245 aa12.83□□□□□ -0.36
ECHDC1-216ENST00000479525 Q6ZRM9 215 aa12.83□□□□□ -0.36
ECHDC1-216ENST00000479525 TCF24Q7RTU0 167 aa12.83□□□□□ -0.36
ECHDC1-216ENST00000479525 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
ECHDC1-216ENST00000479525 LHFPL5Q8TAF8 219 aa12.83□□□□□ -0.36
ECHDC1-216ENST00000479525 PUS1Q9Y606 427 aaKnown RBP eCLIP12.83□□□□□ -0.36
ECHDC1-216ENST00000479525 TRAV14DV4A0A0A6YYC5 116 aa12.82□□□□□ -0.36
ECHDC1-216ENST00000479525 A0A1B0GU03 582 aa12.82□□□□□ -0.36
ECHDC1-216ENST00000479525 OR5AC1P0C628 307 aa12.82□□□□□ -0.36
ECHDC1-216ENST00000479525 SNCAP37840 140 aa12.82□□□□□ -0.36
ECHDC1-216ENST00000479525 ARRDC1Q8N5I2 433 aa12.82□□□□□ -0.36
ECHDC1-216ENST00000479525 TMEM229BQ8NBD8 167 aa12.82□□□□□ -0.36
ECHDC1-216ENST00000479525 OR10C1Q96KK4 312 aa12.82□□□□□ -0.36
ECHDC1-216ENST00000479525 FNDC4Q9H6D8 234 aaPredicted RBP12.82□□□□□ -0.36
ECHDC1-216ENST00000479525 MAP6D1Q9H9H5 199 aa12.82□□□□□ -0.36
ECHDC1-216ENST00000479525 BIRC6Q9NR09 4857 aa12.82□□□□□ -0.36
ECHDC1-216ENST00000479525 DFFBO76075 338 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 CD74P04233 296 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 TAS2R19P59542 299 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 TNFRSF9Q07011 255 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 MEF2DQ14814 521 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 LEMD1Q68G75 181 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 GPR141Q7Z602 305 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 CLVS1Q8IUQ0 354 aaPredicted RBP12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 STPG3Q8N7X2 389 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 TERB2Q8NHR7 220 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 ZNF486Q96H40 463 aaPredicted RBP12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 ATP6V0BQ99437 205 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 PDCD10Q9BUL8 212 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 ZFAND3Q9H8U3 227 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 ALDH3B2P48448 385 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 RPL11P62913 178 aaKnown RBP12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 FAM90A2PQ658T7 463 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 CCDC71LQ8N9Z2 235 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 DUSP18Q8NEJ0 188 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 ZFAND1Q8TCF1 268 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 RNF183Q96D59 192 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 GALNT14Q96FL9 552 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 TXN2Q99757 166 aa12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 RTBDNQ9BSG5 229 aaPredicted RBP12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 MRPS26Q9BYN8 205 aaKnown RBP12.81□□□□□ -0.36
ECHDC1-216ENST00000479525 GABARAPH6UMI1 98 aa12.8□□□□□ -0.36
ECHDC1-216ENST00000479525 TMEM50AO95807 157 aa12.8□□□□□ -0.36
ECHDC1-216ENST00000479525 UCP1P25874 307 aa12.8□□□□□ -0.36
ECHDC1-216ENST00000479525 BMI1P35226 326 aa12.8□□□□□ -0.36
ECHDC1-216ENST00000479525 OPRK1P41145 380 aa12.8□□□□□ -0.36
ECHDC1-216ENST00000479525 Q6ZWC4 215 aa12.8□□□□□ -0.36
ECHDC1-216ENST00000479525 OR4C16Q8NGL9 310 aa12.8□□□□□ -0.36
ECHDC1-216ENST00000479525 RRNAD1Q96FB5 475 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms