RNA–Protein interactions for RNA: ENST00000479064.5

HPS4-211, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-211ENST00000479064 CMC4P56277 68 aaPredicted RBP14.76□□□□□ -0.05
HPS4-211ENST00000479064 ZNF414Q96IQ9 312 aa14.76□□□□□ -0.05
HPS4-211ENST00000479064 MRPS26Q9BYN8 205 aaKnown RBP14.76□□□□□ -0.05
HPS4-211ENST00000479064 COPZ2Q9P299 210 aa14.76□□□□□ -0.05
HPS4-211ENST00000479064 RYR2Q92736 4967 aa14.76□□□□□ -0.05
HPS4-211ENST00000479064 IGHV7-4-1A0A0J9YVY3 117 aa14.75□□□□□ -0.05
HPS4-211ENST00000479064 GABARAPH6UMI1 98 aa14.75□□□□□ -0.05
HPS4-211ENST00000479064 JTBO76095 146 aa14.75□□□□□ -0.05
HPS4-211ENST00000479064 IGKV1-5P01602 117 aa14.75□□□□□ -0.05
HPS4-211ENST00000479064 AKR1C2P52895 323 aa14.75□□□□□ -0.05
HPS4-211ENST00000479064 ODF3L2Q3SX64 289 aa14.75□□□□□ -0.05
HPS4-211ENST00000479064 PVRIGQ6DKI7 326 aa14.75□□□□□ -0.05
HPS4-211ENST00000479064 TP53RKQ96S44 253 aa14.75□□□□□ -0.05
HPS4-211ENST00000479064 RABL2AQ9UBK7 228 aaPredicted RBP14.75□□□□□ -0.05
HPS4-211ENST00000479064 RABL2BQ9UNT1 228 aa14.75□□□□□ -0.05
HPS4-211ENST00000479064 CORTO00230 105 aa14.74□□□□□ -0.05
HPS4-211ENST00000479064 CHEK1O14757 476 aa14.74□□□□□ -0.05
HPS4-211ENST00000479064 GNG7O60262 68 aa14.74□□□□□ -0.05
HPS4-211ENST00000479064 RAB3DO95716 219 aa14.74□□□□□ -0.05
HPS4-211ENST00000479064 CTSDP07339 412 aaPredicted RBP14.74□□□□□ -0.05
HPS4-211ENST00000479064 PI3P19957 117 aa14.74□□□□□ -0.05
HPS4-211ENST00000479064 UCP1P25874 307 aa14.74□□□□□ -0.05
HPS4-211ENST00000479064 BMI1P35226 326 aa14.74□□□□□ -0.05
HPS4-211ENST00000479064 SNCAP37840 140 aa14.74□□□□□ -0.05
HPS4-211ENST00000479064 NPBWR1P48145 328 aa14.74□□□□□ -0.05
HPS4-211ENST00000479064 ALDH3B2P48448 385 aa14.74□□□□□ -0.05
HPS4-211ENST00000479064 SUB1P53999 127 aaKnown RBP eCLIP14.74□□□□□ -0.05
HPS4-211ENST00000479064 RNASE12Q5GAN4 147 aaKnown RBP14.74□□□□□ -0.05
HPS4-211ENST00000479064 SLC35G3Q8N808 338 aa14.74□□□□□ -0.05
HPS4-211ENST00000479064 TMEM116Q8NCL8 245 aa14.74□□□□□ -0.05
HPS4-211ENST00000479064 GINS3Q9BRX5 216 aa14.74□□□□□ -0.05
HPS4-211ENST00000479064 PDCD10Q9BUL8 212 aa14.74□□□□□ -0.05
HPS4-211ENST00000479064 RHPN1-AS1Q9BWJ2 59 aa14.74□□□□□ -0.05
HPS4-211ENST00000479064 TRAV14DV4A0A0A6YYC5 116 aa14.73□□□□□ -0.05
HPS4-211ENST00000479064 A0A0B4J293 547 aa14.73□□□□□ -0.05
HPS4-211ENST00000479064 MEF2DQ14814 521 aa14.73□□□□□ -0.05
HPS4-211ENST00000479064 STEAP1BQ6NZ63 245 aa14.73□□□□□ -0.05
HPS4-211ENST00000479064 GPR141Q7Z602 305 aa14.73□□□□□ -0.05
HPS4-211ENST00000479064 DUSP18Q8NEJ0 188 aa14.73□□□□□ -0.05
HPS4-211ENST00000479064 GALNT14Q96FL9 552 aa14.73□□□□□ -0.05
HPS4-211ENST00000479064 IGHV3OR16-8A0A075B7F1 116 aa14.72□□□□□ -0.05
HPS4-211ENST00000479064 ST8SIA3O43173 380 aa14.72□□□□□ -0.05
HPS4-211ENST00000479064 ZNF207O43670 478 aaKnown RBP14.72□□□□□ -0.05
HPS4-211ENST00000479064 YIF1AO95070 293 aa14.72□□□□□ -0.05
HPS4-211ENST00000479064 ATF4P18848 351 aaPredicted RBP14.72□□□□□ -0.05
HPS4-211ENST00000479064 PPP5CP53041 499 aa14.72□□□□□ -0.05
HPS4-211ENST00000479064 SURF2Q15527 256 aaPredicted RBP14.72□□□□□ -0.05
HPS4-211ENST00000479064 TRIM16LQ309B1 348 aa14.72□□□□□ -0.05
HPS4-211ENST00000479064 AARDQ4LEZ3 155 aa14.72□□□□□ -0.05
HPS4-211ENST00000479064 FAM219AQ8IW50 185 aa14.72□□□□□ -0.05
HPS4-211ENST00000479064 OR4D10Q8NGI6 311 aa14.72□□□□□ -0.05
HPS4-211ENST00000479064 OR13C8Q8NGS7 320 aa14.72□□□□□ -0.05
HPS4-211ENST00000479064 PINX1Q96BK5 328 aaKnown RBP14.72□□□□□ -0.05
HPS4-211ENST00000479064 RRNAD1Q96FB5 475 aaKnown RBP14.72□□□□□ -0.05
HPS4-211ENST00000479064 RNF2Q99496 336 aa14.72□□□□□ -0.05
HPS4-211ENST00000479064 C6orf62Q9GZU0 229 aaPredicted RBP14.72□□□□□ -0.05
HPS4-211ENST00000479064 MIXL1Q9H2W2 232 aa14.72□□□□□ -0.05
HPS4-211ENST00000479064 UBQLN2Q9UHD9 624 aa14.72□□□□□ -0.05
HPS4-211ENST00000479064 SPRY2O43597 315 aa14.71□□□□□ -0.05
HPS4-211ENST00000479064 IFNA17P01571 189 aa14.71□□□□□ -0.05
HPS4-211ENST00000479064 TNFRSF9Q07011 255 aa14.71□□□□□ -0.05
HPS4-211ENST00000479064 IZUMO4Q1ZYL8 232 aa14.71□□□□□ -0.05
HPS4-211ENST00000479064 FAM90A2PQ658T7 463 aa14.71□□□□□ -0.05
HPS4-211ENST00000479064 STPG3Q8N7X2 389 aa14.71□□□□□ -0.05
HPS4-211ENST00000479064 SMIM4Q8WVI0 70 aa14.71□□□□□ -0.05
HPS4-211ENST00000479064 BCL7BQ9BQE9 202 aa14.71□□□□□ -0.05
HPS4-211ENST00000479064 CTDSPLO15194 276 aa14.7□□□□□ -0.06
HPS4-211ENST00000479064 RGS5O15539 181 aa14.7□□□□□ -0.06
HPS4-211ENST00000479064 CDS2O95674 445 aa14.7□□□□□ -0.06
HPS4-211ENST00000479064 RPL5P46777 297 aaKnown RBP14.7□□□□□ -0.06
HPS4-211ENST00000479064 SCGB2B2Q4G0G5 96 aa14.7□□□□□ -0.06
HPS4-211ENST00000479064 ZNF600Q6ZNG1 722 aa14.7□□□□□ -0.06
HPS4-211ENST00000479064 OR52E5Q8NH55 327 aa14.7□□□□□ -0.06
HPS4-211ENST00000479064 TMEM222Q9H0R3 208 aa14.7□□□□□ -0.06
HPS4-211ENST00000479064 RNASE2P10153 161 aaKnown RBP14.69□□□□□ -0.06
HPS4-211ENST00000479064 PAFAH1B2P68402 229 aa14.69□□□□□ -0.06
HPS4-211ENST00000479064 TOMM20LQ6UXN7 152 aa14.69□□□□□ -0.06
HPS4-211ENST00000479064 MARCH1Q8TCQ1 289 aa14.69□□□□□ -0.06
HPS4-211ENST00000479064 RAB2BQ8WUD1 216 aa14.69□□□□□ -0.06
HPS4-211ENST00000479064 RNF183Q96D59 192 aa14.69□□□□□ -0.06
HPS4-211ENST00000479064 VSIRQ9H7M9 311 aa14.69□□□□□ -0.06
HPS4-211ENST00000479064 ENY2Q9NPA8 101 aa14.69□□□□□ -0.06
HPS4-211ENST00000479064 C14orf166Q9Y224 244 aaKnown RBP14.69□□□□□ -0.06
HPS4-211ENST00000479064 TRAV2A0A0B4J234 112 aa14.68□□□□□ -0.06
HPS4-211ENST00000479064 DISC1C4P0D8 188 aa14.68□□□□□ -0.06
HPS4-211ENST00000479064 CTDSP2O14595 271 aa14.68□□□□□ -0.06
HPS4-211ENST00000479064 SCGB2A1O75556 95 aa14.68□□□□□ -0.06
HPS4-211ENST00000479064 TMEM50AO95807 157 aa14.68□□□□□ -0.06
HPS4-211ENST00000479064 IGHV3-48P01763 117 aa14.68□□□□□ -0.06
HPS4-211ENST00000479064 HOXA1P49639 335 aaPredicted RBP14.68□□□□□ -0.06
HPS4-211ENST00000479064 SPCS3P61009 180 aa14.68□□□□□ -0.06
HPS4-211ENST00000479064 DHODHQ02127 395 aa14.68□□□□□ -0.06
HPS4-211ENST00000479064 BSXQ3C1V8 233 aa14.68□□□□□ -0.06
HPS4-211ENST00000479064 SP6Q3SY56 376 aa14.68□□□□□ -0.06
HPS4-211ENST00000479064 SPINK9Q5DT21 86 aa14.68□□□□□ -0.06
HPS4-211ENST00000479064 MAP6D1Q9H9H5 199 aa14.68□□□□□ -0.06
HPS4-211ENST00000479064 CCDC59Q9P031 241 aaKnown RBP14.68□□□□□ -0.06
HPS4-211ENST00000479064 CACFD1Q9UGQ2 172 aa14.68□□□□□ -0.06
HPS4-211ENST00000479064 ETV6P41212 452 aa14.67□□□□□ -0.06
HPS4-211ENST00000479064 SPCS2Q15005 226 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms