RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 HS3ST6Q96QI5 342 aa11.79□□□□□ -0.52
NPHP4-208ENST00000478423 PIEZO2Q9H5I5 2752 aa11.79□□□□□ -0.52
NPHP4-208ENST00000478423 GPX4P36969 197 aaPredicted RBP11.79□□□□□ -0.52
NPHP4-208ENST00000478423 OR8A1Q8NGG7 326 aa11.79□□□□□ -0.52
NPHP4-208ENST00000478423 VENTXO95231 258 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 AMY1AP04745 511 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 Q6ZN92 141 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 MIR17HGQ75NE6 70 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 MRPL18Q9H0U6 180 aaKnown RBP11.78□□□□□ -0.52
NPHP4-208ENST00000478423 DPRXA6NFQ7 191 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 GPR183P32249 361 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 Q6P435 159 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 RPRMLQ8N4K4 120 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 CLDND2Q8NHS1 167 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 HSPB9Q9BQS6 159 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 GSX1Q9H4S2 264 aaPredicted RBP11.78□□□□□ -0.52
NPHP4-208ENST00000478423 NBR2O15453 112 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 ZNF207O43670 478 aaKnown RBP11.78□□□□□ -0.52
NPHP4-208ENST00000478423 NTF4P34130 210 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 RELQ04864 619 aaPredicted RBP11.78□□□□□ -0.52
NPHP4-208ENST00000478423 OR52E5Q8NH55 327 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 COQ2Q96H96 371 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 WFDC1Q9HC57 220 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 CENPVQ7Z7K6 275 aaPredicted RBP11.78□□□□□ -0.52
NPHP4-208ENST00000478423 ZNF383Q8NA42 475 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 AUP1Q9Y679 476 aa11.78□□□□□ -0.52
NPHP4-208ENST00000478423 TMEM178BH3BS89 294 aa11.77□□□□□ -0.52
NPHP4-208ENST00000478423 HAX1O00165 279 aa11.77□□□□□ -0.52
NPHP4-208ENST00000478423 PSG9Q00887 426 aa11.77□□□□□ -0.52
NPHP4-208ENST00000478423 NMSQ5H8A3 153 aa11.77□□□□□ -0.52
NPHP4-208ENST00000478423 C10orf55Q5SWW7 151 aa11.77□□□□□ -0.52
NPHP4-208ENST00000478423 EIF4E3Q8N5X7 224 aaKnown RBP11.77□□□□□ -0.52
NPHP4-208ENST00000478423 TEX29Q8N6K0 151 aa11.77□□□□□ -0.52
NPHP4-208ENST00000478423 PRR14LQ5THK1 2151 aa11.77□□□□□ -0.53
NPHP4-208ENST00000478423 SCO2A0A1W2PP80 73 aa11.77□□□□□ -0.53
NPHP4-208ENST00000478423 TIMM23O14925 209 aa11.77□□□□□ -0.53
NPHP4-208ENST00000478423 ASCL4Q6XD76 172 aa11.77□□□□□ -0.53
NPHP4-208ENST00000478423 MSRB2Q9Y3D2 182 aa11.77□□□□□ -0.53
NPHP4-208ENST00000478423 NUP210Q8TEM1 1887 aaPredicted RBP11.77□□□□□ -0.53
NPHP4-208ENST00000478423 IGKV1-5P01602 117 aa11.77□□□□□ -0.53
NPHP4-208ENST00000478423 CKS2P33552 79 aa11.77□□□□□ -0.53
NPHP4-208ENST00000478423 MAS1LP35410 378 aa11.77□□□□□ -0.53
NPHP4-208ENST00000478423 DLX6P56179 175 aa11.77□□□□□ -0.53
NPHP4-208ENST00000478423 TBX15Q96SF7 602 aa11.77□□□□□ -0.53
NPHP4-208ENST00000478423 WDR83OSQ9Y284 106 aa11.77□□□□□ -0.53
NPHP4-208ENST00000478423 TRGC1P0CF51 173 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 C20orf204Q6ZNR8 217 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 DIRC3C9JPN6 131 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 FGF16O43320 207 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 PRCDQ00LT1 54 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 C1orf147Q96MC9 270 aaPredicted RBP11.76□□□□□ -0.53
NPHP4-208ENST00000478423 HSPB8Q9UJY1 196 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 IGKV1D-17A0A075B6S4 117 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 SRSF3P84103 164 aaKnown RBP11.76□□□□□ -0.53
NPHP4-208ENST00000478423 ADIPOQQ15848 244 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 OR1P1Q8NH06 330 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 TLN1Q9Y490 2541 aaKnown RBP11.76□□□□□ -0.53
NPHP4-208ENST00000478423 CCDC168Q8NDH2 2452 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 IGHV3-66A0A0C4DH42 116 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 CCL20P78556 96 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 RELBQ01201 579 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 CD69Q07108 199 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 PRR30Q53SZ7 412 aaPredicted RBP11.76□□□□□ -0.53
NPHP4-208ENST00000478423 OR10W1Q8NGF6 305 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 DMRTA2Q96SC8 542 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 NEU1Q99519 415 aa11.76□□□□□ -0.53
NPHP4-208ENST00000478423 TRBV6-6A0A0A6YYG2 114 aa11.75□□□□□ -0.53
NPHP4-208ENST00000478423 SLC17A3O00476 420 aa11.75□□□□□ -0.53
NPHP4-208ENST00000478423 SRIP30626 198 aa11.75□□□□□ -0.53
NPHP4-208ENST00000478423 RSPO1Q2MKA7 263 aaPredicted RBP11.75□□□□□ -0.53
NPHP4-208ENST00000478423 TMEM200BQ69YZ2 307 aa11.75□□□□□ -0.53
NPHP4-208ENST00000478423 SMAD7O15105 426 aaKnown RBP11.75□□□□□ -0.53
NPHP4-208ENST00000478423 GCGP01275 180 aa11.75□□□□□ -0.53
NPHP4-208ENST00000478423 CBLN1P23435 193 aa11.75□□□□□ -0.53
NPHP4-208ENST00000478423 LINC00205P59089 165 aa11.75□□□□□ -0.53
NPHP4-208ENST00000478423 GCSAMLQ5JQS6 135 aa11.75□□□□□ -0.53
NPHP4-208ENST00000478423 FOXI3A8MTJ6 420 aaPredicted RBP11.75□□□□□ -0.53
NPHP4-208ENST00000478423 GRIFINA4D1Z8 144 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 CFPP27918 469 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 CX3CL1P78423 397 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 SIAH2O43255 324 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 CD99P14209 185 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 HERPUD1Q15011 391 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 UNQ6494/PRO21346Q6UXR6 183 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 KIAA1671Q9BY89 1806 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 K7ENP7 123 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 LY6HO94772 140 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 ANOS1P23352 680 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 PEX7O00628 323 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 TEX45Q8NA69 505 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 MYOZ3Q8TDC0 251 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 TNFRSF14Q92956 283 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 SDF2L1Q9HCN8 221 aa11.74□□□□□ -0.53
NPHP4-208ENST00000478423 GPX1P07203 203 aa11.73□□□□□ -0.53
NPHP4-208ENST00000478423 RNF224P0DH78 156 aa11.73□□□□□ -0.53
NPHP4-208ENST00000478423 IGHV1-8P0DP01 117 aa11.73□□□□□ -0.53
NPHP4-208ENST00000478423 G0S2P27469 103 aa11.73□□□□□ -0.53
NPHP4-208ENST00000478423 Q1RN00 199 aa11.73□□□□□ -0.53
NPHP4-208ENST00000478423 CLEC19AQ6UXS0 136 aa11.73□□□□□ -0.53
NPHP4-208ENST00000478423 NEUROG1Q92886 237 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms