RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 SCGB1D2O95969 90 aa15.43■□□□□ 0.06
ACTB-210ENST00000477812 NPY1RP25929 384 aa15.43■□□□□ 0.06
ACTB-210ENST00000477812 SLC25A24Q6NUK1 477 aa15.43■□□□□ 0.06
ACTB-210ENST00000477812 ZNF343Q6P1L6 599 aa15.43■□□□□ 0.06
ACTB-210ENST00000477812 KLHL30-AS1Q8NEE0 82 aa15.43■□□□□ 0.06
ACTB-210ENST00000477812 U3KQ87 197 aa15.43■□□□□ 0.06
ACTB-210ENST00000477812 MFSD2BA6NFX1 497 aa15.42■□□□□ 0.06
ACTB-210ENST00000477812 I3L2K1 104 aa15.42■□□□□ 0.06
ACTB-210ENST00000477812 WRBO00258 174 aa15.42■□□□□ 0.06
ACTB-210ENST00000477812 CYB5BO43169 146 aa15.42■□□□□ 0.06
ACTB-210ENST00000477812 LY86O95711 162 aa15.42■□□□□ 0.06
ACTB-210ENST00000477812 IGHV3-11P01762 117 aa15.42■□□□□ 0.06
ACTB-210ENST00000477812 LGALS1P09382 135 aaKnown RBP15.42■□□□□ 0.06
ACTB-210ENST00000477812 SUB1P53999 127 aaKnown RBP eCLIP15.42■□□□□ 0.064e-15■□□□□ 8.7
ACTB-210ENST00000477812 ATP5G2Q06055 141 aa15.42■□□□□ 0.06
ACTB-210ENST00000477812 RAB32Q13637 225 aa15.42■□□□□ 0.06
ACTB-210ENST00000477812 NSUN5P1Q3KNT7 163 aa15.42■□□□□ 0.06
ACTB-210ENST00000477812 C8orf86Q6ZUL3 223 aa15.42■□□□□ 0.06
ACTB-210ENST00000477812 CCDC140Q96MF4 163 aa15.42■□□□□ 0.06
ACTB-210ENST00000477812 OR4C12Q96R67 309 aa15.42■□□□□ 0.06
ACTB-210ENST00000477812 RAB40CQ96S21 281 aa15.42■□□□□ 0.06
ACTB-210ENST00000477812 VWFP04275 2813 aa15.41■□□□□ 0.06
ACTB-210ENST00000477812 ATP5IP56385 69 aaPredicted RBP15.41■□□□□ 0.06
ACTB-210ENST00000477812 CYCSP99999 105 aaKnown RBP15.41■□□□□ 0.06
ACTB-210ENST00000477812 EXOSC2Q13868 293 aaKnown RBP15.41■□□□□ 0.06
ACTB-210ENST00000477812 ETV3LQ6ZN32 361 aa15.41■□□□□ 0.06
ACTB-210ENST00000477812 VN1R17PQ8TDU5 208 aa15.41■□□□□ 0.06
ACTB-210ENST00000477812 MISP3Q96FF7 219 aa15.41■□□□□ 0.06
ACTB-210ENST00000477812 SMIM8Q96KF7 97 aa15.41■□□□□ 0.06
ACTB-210ENST00000477812 OR5B12Q96R08 314 aa15.41■□□□□ 0.06
ACTB-210ENST00000477812 THYN1Q9P016 225 aa15.41■□□□□ 0.06
ACTB-210ENST00000477812 NUDT19A8MXV4 375 aa15.4■□□□□ 0.06
ACTB-210ENST00000477812 F8W735 103 aaPredicted RBP15.4■□□□□ 0.06
ACTB-210ENST00000477812 IFNA10P01566 189 aa15.4■□□□□ 0.06
ACTB-210ENST00000477812 TAS2R30P59541 319 aa15.4■□□□□ 0.06
ACTB-210ENST00000477812 DEFB136Q30KP8 78 aa15.4■□□□□ 0.06
ACTB-210ENST00000477812 ZNF502Q8TBZ5 544 aa15.4■□□□□ 0.06
ACTB-210ENST00000477812 SCARB1Q8WTV0 552 aa15.4■□□□□ 0.06
ACTB-210ENST00000477812 CXorf58Q96LI9 332 aa15.4■□□□□ 0.06
ACTB-210ENST00000477812 FNDC4Q9H6D8 234 aaPredicted RBP15.4■□□□□ 0.06
ACTB-210ENST00000477812 LSM5Q9Y4Y9 91 aaKnown RBP15.4■□□□□ 0.06
ACTB-210ENST00000477812 S4R3C0 116 aa15.4■□□□□ 0.06
ACTB-210ENST00000477812 TRRAPQ9Y4A5 3859 aa15.39■□□□□ 0.05
ACTB-210ENST00000477812 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.39■□□□□ 0.05
ACTB-210ENST00000477812 H3BP45 60 aa15.39■□□□□ 0.05
ACTB-210ENST00000477812 CORTO00230 105 aa15.39■□□□□ 0.05
ACTB-210ENST00000477812 TSPAN15O95858 294 aa15.39■□□□□ 0.05
ACTB-210ENST00000477812 MT-CO2P00403 227 aa15.39■□□□□ 0.05
ACTB-210ENST00000477812 TRBV12-3P01733 135 aa15.39■□□□□ 0.05
ACTB-210ENST00000477812 FHL3Q13643 280 aa15.39■□□□□ 0.05
ACTB-210ENST00000477812 RNASEH2CQ8TDP1 164 aaKnown RBP15.39■□□□□ 0.05
ACTB-210ENST00000477812 PPP1R1CQ8WVI7 109 aa15.39■□□□□ 0.05
ACTB-210ENST00000477812 RAX2Q96IS3 184 aa15.39■□□□□ 0.05
ACTB-210ENST00000477812 WNK1Q9H4A3 2382 aa15.39■□□□□ 0.05
ACTB-210ENST00000477812 PRSS46E5RG02 174 aa15.38■□□□□ 0.05
ACTB-210ENST00000477812 H0YIZ8 118 aa15.38■□□□□ 0.05
ACTB-210ENST00000477812 TSC22D2O75157 780 aa15.38■□□□□ 0.05
ACTB-210ENST00000477812 DEDDO75618 318 aa15.38■□□□□ 0.05
ACTB-210ENST00000477812 S100A10P60903 97 aa15.38■□□□□ 0.05
ACTB-210ENST00000477812 SPANXN5Q5MJ07 72 aa15.38■□□□□ 0.05
ACTB-210ENST00000477812 NOXA1Q86UR1 476 aa15.38■□□□□ 0.05
ACTB-210ENST00000477812 EEF1AKMT3Q96AZ1 226 aa15.38■□□□□ 0.05
ACTB-210ENST00000477812 ZNF436Q9C0F3 470 aaPredicted RBP15.38■□□□□ 0.05
ACTB-210ENST00000477812 PSENENQ9NZ42 101 aa15.38■□□□□ 0.05
ACTB-210ENST00000477812 TRBV7-1A0A0A6YYK4 115 aa15.37■□□□□ 0.05
ACTB-210ENST00000477812 IGHV3-21A0A0B4J1V1 117 aa15.37■□□□□ 0.05
ACTB-210ENST00000477812 IGHV3-23P01764 117 aa15.37■□□□□ 0.05
ACTB-210ENST00000477812 LRRC37A5PQ49AS3 106 aa15.37■□□□□ 0.05
ACTB-210ENST00000477812 TMEM14EPQ6UXP3 125 aa15.37■□□□□ 0.05
ACTB-210ENST00000477812 PINX1Q96BK5 328 aaKnown RBP15.37■□□□□ 0.05
ACTB-210ENST00000477812 DUX3Q96PT4 197 aa15.37■□□□□ 0.05
ACTB-210ENST00000477812 C21orf62Q9NYP8 219 aa15.37■□□□□ 0.05
ACTB-210ENST00000477812 MRPL36Q9P0J6 103 aaKnown RBP15.37■□□□□ 0.05
ACTB-210ENST00000477812 STRAPQ9Y3F4 350 aaKnown RBP15.37■□□□□ 0.05
ACTB-210ENST00000477812 IGHV4OR15-8A0A075B7B6 117 aa15.36■□□□□ 0.05
ACTB-210ENST00000477812 A0A087WW49 117 aa15.36■□□□□ 0.05
ACTB-210ENST00000477812 PMS2P5A8MQ11 134 aa15.36■□□□□ 0.05
ACTB-210ENST00000477812 IGHV3-48P01763 117 aa15.36■□□□□ 0.05
ACTB-210ENST00000477812 GIPP09681 153 aaPredicted RBP15.36■□□□□ 0.05
ACTB-210ENST00000477812 FCGR2BP31994 310 aaPredicted RBP15.36■□□□□ 0.05
ACTB-210ENST00000477812 MLANAQ16655 118 aa15.36■□□□□ 0.05
ACTB-210ENST00000477812 CHAC2Q8WUX2 184 aa15.36■□□□□ 0.05
ACTB-210ENST00000477812 ASB13Q8WXK3 278 aa15.36■□□□□ 0.05
ACTB-210ENST00000477812 ATP6V0BQ99437 205 aa15.36■□□□□ 0.05
ACTB-210ENST00000477812 OR5AC2Q9NZP5 309 aa15.36■□□□□ 0.05
ACTB-210ENST00000477812 PEF1Q9UBV8 284 aaKnown RBP15.36■□□□□ 0.05
ACTB-210ENST00000477812 M0QZ24 198 aa15.35■□□□□ 0.05
ACTB-210ENST00000477812 CCL24O00175 119 aa15.35■□□□□ 0.05
ACTB-210ENST00000477812 BMPR1BO00238 502 aa15.35■□□□□ 0.05
ACTB-210ENST00000477812 MPC2O95563 127 aa15.35■□□□□ 0.05
ACTB-210ENST00000477812 HSPB1P04792 205 aaKnown RBP15.35■□□□□ 0.05
ACTB-210ENST00000477812 OPRK1P41145 380 aa15.35■□□□□ 0.05
ACTB-210ENST00000477812 RPP30P78346 268 aaKnown RBP15.35■□□□□ 0.05
ACTB-210ENST00000477812 FAM209BQ5JX69 171 aa15.35■□□□□ 0.05
ACTB-210ENST00000477812 OR11H1Q8NG94 326 aa15.35■□□□□ 0.05
ACTB-210ENST00000477812 OR4F17Q8NGA8 305 aa15.35■□□□□ 0.05
ACTB-210ENST00000477812 OR4F4Q96R69 305 aa15.35■□□□□ 0.05
ACTB-210ENST00000477812 RNF126Q9BV68 326 aa15.35■□□□□ 0.05
ACTB-210ENST00000477812 TRAV14DV4A0A0A6YYC5 116 aa15.34■□□□□ 0.05
ACTB-210ENST00000477812 ANKRD34BA5PLL1 514 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms