RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 OR10G7Q8NGN6 311 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 OR2T6Q8NHC8 308 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 MBNL3Q9NUK0 354 aaKnown RBP10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 KCNS2Q9ULS6 477 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 OTOGLQ3ZCN5 2332 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 MED12LQ86YW9 2145 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 MED12Q93074 2177 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 F5H5K5 113 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 TNFSF11O14788 317 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 IGHV3-7P01780 117 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 B3GALT5-AS1P59052 145 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 FXYD4P59646 89 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 CEACAM16Q2WEN9 425 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 OR5AS1Q8N127 324 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 WIPF2Q8TF74 440 aaPredicted RBP10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 DAZAP1Q96EP5 407 aaKnown RBP10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 FAM173AQ9BQD7 235 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 V9GYV3 84 aa10.49□□□□□ -0.73
RTFDC1-207ENST00000477573 A0A0J9YW62 118 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 A0A1W2PRD5 423 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 A0A1W2PRF3 423 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 A0A1W2PRM7 423 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 CT45A10P0DMU9 189 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 GLI4P10075 376 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 HERV-K104P61576 105 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 OR1L1Q8NH94 360 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 COL25A1Q9BXS0 654 aaPredicted RBP10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 TNFRSF19Q9NS68 423 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 A0A1W2PP11 408 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 MT-ATP8P03928 68 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 OR5AL1P0C617 328 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 FRMD6-AS1P0C7T7 363 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 SMIM13P0DJ93 91 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 VDAC2P45880 294 aaPredicted RBP10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 TLE1Q04724 770 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 WFDC2Q14508 124 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 PDLIM3Q53GG5 364 aaPredicted RBP10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 SPINK14Q6IE38 97 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 Q6ZS92 163 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 ZNF295-AS1Q8N0V1 137 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 TEX29Q8N6K0 151 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 DEFB124Q8NES8 71 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 Q8TCH9 128 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 NAA38Q9BRA0 125 aaKnown RBP10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 TMEM204Q9BSN7 226 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 TMEM126AQ9H061 195 aa10.48□□□□□ -0.73
RTFDC1-207ENST00000477573 NHLRC4P0CG21 123 aaPredicted RBP10.47□□□□□ -0.73
RTFDC1-207ENST00000477573 PLP2Q04941 152 aa10.47□□□□□ -0.73
RTFDC1-207ENST00000477573 CATR1Q13166 79 aa10.47□□□□□ -0.73
RTFDC1-207ENST00000477573 ZNF146Q15072 292 aa10.47□□□□□ -0.73
RTFDC1-207ENST00000477573 POU2AF1Q16633 256 aa10.47□□□□□ -0.73
RTFDC1-207ENST00000477573 ETDBQ3ZM63 59 aa10.47□□□□□ -0.73
RTFDC1-207ENST00000477573 FAM120AOSQ5T036 256 aa10.47□□□□□ -0.73
RTFDC1-207ENST00000477573 C10orf128Q5T292 105 aa10.47□□□□□ -0.73
RTFDC1-207ENST00000477573 ZNF645Q8N7E2 425 aa10.47□□□□□ -0.73
RTFDC1-207ENST00000477573 GTSF1Q8WW33 167 aa10.47□□□□□ -0.73
RTFDC1-207ENST00000477573 DDB2Q92466 427 aa10.47□□□□□ -0.73
RTFDC1-207ENST00000477573 OR4C12Q96R67 309 aa10.47□□□□□ -0.73
RTFDC1-207ENST00000477573 UCN2Q96RP3 112 aa10.47□□□□□ -0.73
RTFDC1-207ENST00000477573 DEPPQ9NTK1 212 aa10.47□□□□□ -0.73
RTFDC1-207ENST00000477573 NCOA6Q14686 2063 aaPredicted RBP10.47□□□□□ -0.73
RTFDC1-207ENST00000477573 IGHV3-15A0A0B4J1V0 119 aa10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 C3orf80F5H4A9 247 aa10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 NEURL1O76050 574 aa10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 RFPL3SP0C7P2 107 aa10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 EP300Q09472 2414 aaPredicted RBP10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 PSG7Q13046 419 aa10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 OR1C1Q15619 314 aa10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 Q6AWC8 147 aa10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 ZADH2Q8N4Q0 377 aa10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 SYT8Q8NBV8 401 aa10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 H1FXQ92522 213 aaKnown RBP10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 PCSK5Q92824 1860 aa10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 RAB37Q96AX2 223 aa10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 PPDPFQ9H3Y8 114 aa10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 POLDIP2Q9Y2S7 368 aa10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 LHFPL6Q9Y693 200 aa10.46□□□□□ -0.73
RTFDC1-207ENST00000477573 TRGV10A0A0A0MS01 117 aa10.46□□□□□ -0.74
RTFDC1-207ENST00000477573 CDAP32320 146 aa10.46□□□□□ -0.74
RTFDC1-207ENST00000477573 MFAP5Q13361 173 aa10.46□□□□□ -0.74
RTFDC1-207ENST00000477573 WIPI1Q5MNZ9 446 aaPredicted RBP10.46□□□□□ -0.74
RTFDC1-207ENST00000477573 RNASEKQ6P5S7 137 aaKnown RBP10.46□□□□□ -0.74
RTFDC1-207ENST00000477573 GGNQ86UU5 652 aa10.46□□□□□ -0.74
RTFDC1-207ENST00000477573 CHCHD1Q96BP2 118 aaKnown RBP10.46□□□□□ -0.74
RTFDC1-207ENST00000477573 RABAC1Q9UI14 185 aa10.46□□□□□ -0.74
RTFDC1-207ENST00000477573 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 NPIPB5A8MRT5 1133 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 H3BP45 60 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 FGF6P10767 208 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 TEPPQ6URK8 271 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 KIR3DL3Q8N743 410 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 C20orf78Q9BR46 151 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 MAP1LC3CQ9BXW4 147 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 SRXN1Q9BYN0 137 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 HMGB3O15347 200 aaKnown RBP10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 LEPROTL1O95214 131 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 EGR1P18146 543 aa10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 FCGR2BP31994 310 aaPredicted RBP10.45□□□□□ -0.74
RTFDC1-207ENST00000477573 ATP5G3P48201 142 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms