RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 H3BP45 60 aa11.89□□□□□ -0.51
SEC13-215ENST00000477547 K7EPK0 472 aa11.89□□□□□ -0.51
SEC13-215ENST00000477547 NDUFB8O95169 186 aa11.89□□□□□ -0.51
SEC13-215ENST00000477547 IGHV3-11P01762 117 aa11.89□□□□□ -0.51
SEC13-215ENST00000477547 RAB32Q13637 225 aa11.89□□□□□ -0.51
SEC13-215ENST00000477547 C15orf32Q32M92 178 aa11.89□□□□□ -0.51
SEC13-215ENST00000477547 LRRC37A5PQ49AS3 106 aa11.89□□□□□ -0.51
SEC13-215ENST00000477547 UBE2E2Q96LR5 201 aa11.89□□□□□ -0.51
SEC13-215ENST00000477547 OR5B12Q96R08 314 aa11.89□□□□□ -0.51
SEC13-215ENST00000477547 GNB4Q9HAV0 340 aa11.89□□□□□ -0.51
SEC13-215ENST00000477547 THYN1Q9P016 225 aa11.89□□□□□ -0.51
SEC13-215ENST00000477547 ADARB2-AS1A8MUL3 147 aa11.88□□□□□ -0.51
SEC13-215ENST00000477547 CORTO00230 105 aa11.88□□□□□ -0.51
SEC13-215ENST00000477547 LY86O95711 162 aa11.88□□□□□ -0.51
SEC13-215ENST00000477547 LGALS1P09382 135 aaKnown RBP11.88□□□□□ -0.51
SEC13-215ENST00000477547 CDX1P47902 265 aaPredicted RBP11.88□□□□□ -0.51
SEC13-215ENST00000477547 CYCSP99999 105 aaKnown RBP11.88□□□□□ -0.51
SEC13-215ENST00000477547 IL15RAQ13261 267 aa11.88□□□□□ -0.51
SEC13-215ENST00000477547 KIAA0141Q14154 515 aaPredicted RBP11.88□□□□□ -0.51
SEC13-215ENST00000477547 KLK9Q2XQG4 91 aa11.88□□□□□ -0.51
SEC13-215ENST00000477547 C2orf83Q53S99 150 aa11.88□□□□□ -0.51
SEC13-215ENST00000477547 Q6ZNX1 250 aa11.88□□□□□ -0.51
SEC13-215ENST00000477547 C18orf65Q6ZTR6 163 aa11.88□□□□□ -0.51
SEC13-215ENST00000477547 C4orf3Q8WVX3 66 aa11.88□□□□□ -0.51
SEC13-215ENST00000477547 PINX1Q96BK5 328 aaKnown RBP11.88□□□□□ -0.51
SEC13-215ENST00000477547 USMG5Q96IX5 58 aa11.88□□□□□ -0.51
SEC13-215ENST00000477547 RAB40CQ96S21 281 aa11.88□□□□□ -0.51
SEC13-215ENST00000477547 KLK9Q9UKQ9 250 aa11.88□□□□□ -0.51
SEC13-215ENST00000477547 PAIP2BQ9ULR5 123 aaKnown RBP11.88□□□□□ -0.51
SEC13-215ENST00000477547 S4R3C0 116 aa11.88□□□□□ -0.51
SEC13-215ENST00000477547 MFSD2BA6NFX1 497 aa11.87□□□□□ -0.51
SEC13-215ENST00000477547 L7N2F9 121 aa11.87□□□□□ -0.51
SEC13-215ENST00000477547 VAMP2P63027 116 aa11.87□□□□□ -0.51
SEC13-215ENST00000477547 ATP5G2Q06055 141 aa11.87□□□□□ -0.51
SEC13-215ENST00000477547 C8orf86Q6ZUL3 223 aa11.87□□□□□ -0.51
SEC13-215ENST00000477547 NOXA1Q86UR1 476 aa11.87□□□□□ -0.51
SEC13-215ENST00000477547 TMEM170AQ8WVE7 144 aa11.87□□□□□ -0.51
SEC13-215ENST00000477547 EEF1AKMT3Q96AZ1 226 aa11.87□□□□□ -0.51
SEC13-215ENST00000477547 WDR89Q96FK6 387 aaPredicted RBP11.87□□□□□ -0.51
SEC13-215ENST00000477547 OR4C12Q96R67 309 aa11.87□□□□□ -0.51
SEC13-215ENST00000477547 U3KQ87 197 aa11.87□□□□□ -0.51
SEC13-215ENST00000477547 WNK1Q9H4A3 2382 aa11.87□□□□□ -0.51
SEC13-215ENST00000477547 IGHV3-21A0A0B4J1V1 117 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 C15orf62A8K5M9 175 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 K7EIM0 57 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 TMEM50AO95807 157 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 OR8U8P0C7N1 319 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 PVALBP20472 110 aaPredicted RBP11.86□□□□□ -0.51
SEC13-215ENST00000477547 OPRK1P41145 380 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 RPP30P78346 268 aaKnown RBP11.86□□□□□ -0.51
SEC13-215ENST00000477547 DEFB136Q30KP8 78 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 SPANXN5Q5MJ07 72 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 PPP1R1CQ8WVI7 109 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 CXorf58Q96LI9 332 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 ZNF436Q9C0F3 470 aaPredicted RBP11.86□□□□□ -0.51
SEC13-215ENST00000477547 PSENENQ9NZ42 101 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 STRAPQ9Y3F4 350 aaKnown RBP11.86□□□□□ -0.51
SEC13-215ENST00000477547 hCG_2014768A0A024R1R8 64 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 TSC22D2O75157 780 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 MT-CO2P00403 227 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 IGHV3-23P01764 117 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 IFNA4P05014 189 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 GIPP09681 153 aaPredicted RBP11.86□□□□□ -0.51
SEC13-215ENST00000477547 PET100P0DJ07 73 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 RAB11AP62491 216 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 PVRIGQ6DKI7 326 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 RNASEH2CQ8TDP1 164 aaKnown RBP11.86□□□□□ -0.51
SEC13-215ENST00000477547 SMIM8Q96KF7 97 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 CCDC140Q96MF4 163 aa11.86□□□□□ -0.51
SEC13-215ENST00000477547 ANKRD34BA5PLL1 514 aa11.85□□□□□ -0.51
SEC13-215ENST00000477547 I3L2K1 104 aa11.85□□□□□ -0.51
SEC13-215ENST00000477547 DEDDO75618 318 aa11.85□□□□□ -0.51
SEC13-215ENST00000477547 PAX9P55771 341 aa11.85□□□□□ -0.51
SEC13-215ENST00000477547 ATP5IP56385 69 aaPredicted RBP11.85□□□□□ -0.51
SEC13-215ENST00000477547 TAS2R30P59541 319 aa11.85□□□□□ -0.51
SEC13-215ENST00000477547 ZNF343Q6P1L6 599 aa11.85□□□□□ -0.51
SEC13-215ENST00000477547 TREML4Q6UXN2 200 aa11.85□□□□□ -0.51
SEC13-215ENST00000477547 VN1R17PQ8TDU5 208 aa11.85□□□□□ -0.51
SEC13-215ENST00000477547 ASB13Q8WXK3 278 aa11.85□□□□□ -0.51
SEC13-215ENST00000477547 C11orf1Q9H5F2 150 aa11.85□□□□□ -0.51
SEC13-215ENST00000477547 C21orf62Q9NYP8 219 aa11.85□□□□□ -0.51
SEC13-215ENST00000477547 RPS10-NUDT3A0A1W2PQS6 291 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 I3L521 148 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 M0QZ24 198 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 MPC2O95563 127 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 TSPAN15O95858 294 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 IGHV3-48P01763 117 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 BCAP31P51572 246 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 CAV2P51636 162 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 RUNX1Q01196 453 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 ETV3LQ6ZN32 361 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 SLC16A13Q7RTY0 426 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 UBAC2Q8NBM4 344 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 OR4F17Q8NGA8 305 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 ZNF502Q8TBZ5 544 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 SCARB1Q8WTV0 552 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 DUX3Q96PT4 197 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 OR4F4Q96R69 305 aa11.84□□□□□ -0.51
SEC13-215ENST00000477547 FNDC4Q9H6D8 234 aaPredicted RBP11.84□□□□□ -0.51
SEC13-215ENST00000477547 OR5AC2Q9NZP5 309 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms