RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 LYZL6O75951 148 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 IGLV2-8P01709 118 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 IGHG3P01860 377 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 CD33P20138 364 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 SRIP30626 198 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 DMRTA1Q5VZB9 504 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 ATP5L2Q7Z4Y8 100 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 NIT1Q86X76 327 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 C11orf42Q8N5U0 333 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 ZNF714Q96N38 554 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 DEFB127Q9H1M4 99 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 SAP30LQ9HAJ7 183 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 DUSP13Q9UII6 198 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 OR2J3O76001 311 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 C3orf79P0CE67 100 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 FOXC1Q12948 553 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 STUMQ69YW2 141 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 TSKUQ8WUA8 353 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 GRAMD2BQ96HH9 432 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 FAM103A1Q9BTL3 118 aaKnown RBP11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 LINC00574Q9H8X3 128 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 C1RLQ9NZP8 487 aa11.09□□□□□ -0.63
HLA-DMA-208ENST00000477541 CACNA1DQ01668 2161 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 DOCK7Q96N67 2140 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 IGHV3-64DA0A0J9YX35 117 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 J3QR06 171 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 UPK2O00526 184 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 SIAH2O43255 324 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 OR7C2O60412 319 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 CECR9P0C854 216 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 PMCHP20382 165 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 USF1P22415 310 aaPredicted RBP11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 PLA2G2CQ5R387 149 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 Q6ZN92 141 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 VASH2Q86V25 355 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 DOLPP1Q86YN1 238 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 VKORC1L1Q8N0U8 176 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 TMEM190Q8WZ59 177 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 MBD6Q96DN6 1003 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 SLC25A33Q9BSK2 321 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 DCTN5Q9BTE1 182 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 BET1LQ9NYM9 111 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 FOXJ2Q9P0K8 574 aa11.08□□□□□ -0.64
HLA-DMA-208ENST00000477541 KBTBD11-OT1A0A1B0GTJ5 212 aa11.07□□□□□ -0.64
HLA-DMA-208ENST00000477541 GGTLC3B5MD39 225 aa11.07□□□□□ -0.64
HLA-DMA-208ENST00000477541 TOMM40O96008 361 aa11.07□□□□□ -0.64
HLA-DMA-208ENST00000477541 ZNF134P52741 427 aa11.07□□□□□ -0.64
HLA-DMA-208ENST00000477541 BATFQ16520 125 aa11.07□□□□□ -0.64
HLA-DMA-208ENST00000477541 LTC4SQ16873 150 aa11.07□□□□□ -0.64
HLA-DMA-208ENST00000477541 OR1L4Q8NGR5 311 aa11.07□□□□□ -0.64
HLA-DMA-208ENST00000477541 C18orf32Q8TCD1 76 aa11.07□□□□□ -0.64
HLA-DMA-208ENST00000477541 ZNF503Q96F45 646 aa11.07□□□□□ -0.64
HLA-DMA-208ENST00000477541 RNASE7Q9H1E1 156 aaKnown RBP11.07□□□□□ -0.64
HLA-DMA-208ENST00000477541 ARRDC1-AS1Q9H2J1 176 aa11.07□□□□□ -0.64
HLA-DMA-208ENST00000477541 DNAJC4Q9NNZ3 241 aa11.07□□□□□ -0.64
HLA-DMA-208ENST00000477541 SOX21Q9Y651 276 aaPredicted RBP11.07□□□□□ -0.64
HLA-DMA-208ENST00000477541 LAMA1P25391 3075 aa11.07□□□□□ -0.64
HLA-DMA-208ENST00000477541 TRAV9-2A0A087WT02 112 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 IGHV2OR16-5A0A0B4J2B6 119 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 SAA2P0DJI9 122 aaPredicted RBP11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 KLF3P57682 345 aaPredicted RBP11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 CD69Q07108 199 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 TBR1Q16650 682 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 C3orf36Q3SXR2 165 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 FAM222BQ8WU58 562 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 RCHY1Q96PM5 261 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 SCNM1Q9BWG6 230 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 FAM234AQ9H0X4 552 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 IGHV2-26A0A0B4J1V2 119 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 LHBP01229 141 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 MMDQ15546 238 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 C17orf58Q2M2W7 97 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 CT45A1Q5HYN5 189 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 VWA1Q6PCB0 445 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 CT45A3Q8NHU0 189 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 TRIB1Q96RU8 372 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 RNF114Q9Y508 228 aa11.06□□□□□ -0.64
HLA-DMA-208ENST00000477541 LAMA5O15230 3695 aa11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 LOC400499M0QZD8 3231 aa11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 HSBP1O75506 76 aa11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 ACTL6BO94805 426 aa11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 HIST1H1EP10412 219 aaKnown RBP11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 MGST1P10620 155 aaKnown RBP11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 TSPOP30536 169 aa11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 GATA4P43694 442 aa11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 FABP6P51161 128 aa11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 BPIFB3P59826 476 aa11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 STXBP6Q8NFX7 210 aa11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 OR8B3Q8NGG8 313 aa11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 OR8B2Q96RD0 313 aa11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 ASCL3Q9NQ33 180 aa11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 PLSCR4Q9NRQ2 329 aa11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 NAV2Q8IVL1 2488 aa11.05□□□□□ -0.64
HLA-DMA-208ENST00000477541 IGHV1-69-2A0A0G2JMI3 117 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 PSMB11A5LHX3 300 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 IGHV3-13P01766 116 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 TFF1P04155 84 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 FRMD6-AS1P0C7T7 363 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 RNASE2P10153 161 aaKnown RBP11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 RPS20P60866 119 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms