RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 TXNDC17Q9BRA2 123 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 DERL1Q9BUN8 251 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 CLEC7AQ9BXN2 247 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 RAB1BQ9H0U4 201 aa8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 YTHDF2Q9Y5A9 579 aaKnown RBP8.9□□□□□ -0.99
HLA-DMB-260ENST00000477537 ZNF98A6NK75 572 aa8.89□□□□□ -0.99
HLA-DMB-260ENST00000477537 VENTXO95231 258 aa8.89□□□□□ -0.99
HLA-DMB-260ENST00000477537 MT-CO2P00403 227 aa8.89□□□□□ -0.99
HLA-DMB-260ENST00000477537 TRGC2P03986 189 aa8.89□□□□□ -0.99
HLA-DMB-260ENST00000477537 GPX4P36969 197 aaPredicted RBP8.89□□□□□ -0.99
HLA-DMB-260ENST00000477537 LGALS7P47929 136 aa8.89□□□□□ -0.99
HLA-DMB-260ENST00000477537 UQCRFS1P47985 274 aa8.89□□□□□ -0.99
HLA-DMB-260ENST00000477537 CACNG8Q8WXS5 425 aa8.89□□□□□ -0.99
HLA-DMB-260ENST00000477537 ACY3Q96HD9 319 aa8.89□□□□□ -0.99
HLA-DMB-260ENST00000477537 CBLN4Q9NTU7 201 aa8.89□□□□□ -0.99
HLA-DMB-260ENST00000477537 MIOXQ9UGB7 285 aa8.89□□□□□ -0.99
HLA-DMB-260ENST00000477537 FUT9Q9Y231 359 aa8.89□□□□□ -0.99
HLA-DMB-260ENST00000477537 UTP20O75691 2785 aaKnown RBP8.89□□□□□ -0.99
HLA-DMB-260ENST00000477537 USP9XQ93008 2570 aaPredicted RBP8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 TRBV24-1A0A075B6N3 115 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 SCO2A0A1W2PP80 73 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 PLXNB1O43157 2135 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 CLN5O75503 358 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 IGLV1-47P01700 117 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 GALR1P47211 349 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 SUB1P53999 127 aaKnown RBP eCLIP8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 MRGPRG-AS1Q2M3A8 158 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 ZNF843Q8N446 348 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 OR5B12Q96R08 314 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 C12orf57Q99622 126 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 ONECUT1Q9UBC0 465 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 NAV3Q8IVL0 2385 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 IGHV1-3A0A0C4DH29 117 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 A0A1W2PPI3 338 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 BUB1B-PAK6H3BSN5 160 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 RBP4P02753 201 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 PFN1P07737 140 aaKnown RBP8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 CNTFRP26992 372 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 MEOX2P50222 304 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 NDUFA6P56556 154 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 TEX45Q8NA69 505 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 BEND2Q8NDZ0 799 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 C8orf46Q8TAG6 207 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 RNASEH2CQ8TDP1 164 aaKnown RBP8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 ANAPC16Q96DE5 110 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 AURKAIP1Q9NWT8 199 aaPredicted RBP8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 DOK5Q9P104 306 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 INSIG2Q9Y5U4 225 aa8.88□□□□□ -0.99
HLA-DMB-260ENST00000477537 REG1AP05451 166 aa8.87□□□□□ -0.99
HLA-DMB-260ENST00000477537 SOD3P08294 240 aa8.87□□□□□ -0.99
HLA-DMB-260ENST00000477537 S100PP25815 95 aa8.87□□□□□ -0.99
HLA-DMB-260ENST00000477537 SSBP2P81877 361 aaPredicted RBP8.87□□□□□ -0.99
HLA-DMB-260ENST00000477537 PSG5Q15238 335 aa8.87□□□□□ -0.99
HLA-DMB-260ENST00000477537 PRSS8Q16651 343 aa8.87□□□□□ -0.99
HLA-DMB-260ENST00000477537 LINC01551Q86U37 167 aa8.87□□□□□ -0.99
HLA-DMB-260ENST00000477537 PNKDQ8N490 385 aa8.87□□□□□ -0.99
HLA-DMB-260ENST00000477537 TIMD4Q96H15 378 aa8.87□□□□□ -0.99
HLA-DMB-260ENST00000477537 ELOVL1Q9BW60 279 aa8.87□□□□□ -0.99
HLA-DMB-260ENST00000477537 TECRQ9NZ01 308 aaKnown RBP8.87□□□□□ -0.99
HLA-DMB-260ENST00000477537 SPTAN1Q13813 2472 aaKnown RBP8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 PGPEP1LA6NFU8 196 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 C22orf46C9J442 243 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 TGOLN2O43493 480 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 HIST1H2BKO60814 126 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 IGHV3-48P01763 117 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 HIST1H2BJP06899 126 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 LIPFP07098 398 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 CRYGBP07316 175 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 OR5G3P0C626 314 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 GNLYP22749 145 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 HIST1H2BOP23527 126 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 HIST1H2BBP33778 126 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 HIST1H2BDP58876 126 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 HIST1H2BCP62807 126 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 TNXAQ16473 311 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 HIST2H2BEQ16778 126 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 CLEC12BQ2HXU8 276 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 C11orf71Q6IPW1 123 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 MMD2Q8IY49 270 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 ZNF114Q8NC26 417 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 HIST1H2BHQ93079 126 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 RPEQ96AT9 228 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 HIST1H2BNQ99877 126 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 HIST1H2BMQ99879 126 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 FNDC4Q9H6D8 234 aaPredicted RBP8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 AMMECR1Q9Y4X0 333 aaPredicted RBP8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 IGLC7A0M8Q6 106 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 PCP4L1A6NKN8 68 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 OR7C2O60412 319 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 S100A8P05109 93 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 LY6G5BQ8NDX9 201 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 NEU4Q8WWR8 484 aaPredicted RBP8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 NPIPB3Q92617 1050 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 FRZBQ92765 325 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 UHRF2Q96PU4 802 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 PYGO2Q9BRQ0 406 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 C19orf24Q9BVV8 132 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 TMEM167BQ9NRX6 74 aa8.86□□□□□ -0.99
HLA-DMB-260ENST00000477537 UBR5O95071 2799 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms