RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 ATXN7O15265 892 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-220ENST00000477528 Q6ZN92 141 aa12.06□□□□□ -0.48
HDAC6-220ENST00000477528 PIP4P1Q86T03 277 aa12.06□□□□□ -0.48
HDAC6-220ENST00000477528 TMEM170AQ8WVE7 144 aa12.06□□□□□ -0.48
HDAC6-220ENST00000477528 TNFRSF14Q92956 283 aa12.06□□□□□ -0.48
HDAC6-220ENST00000477528 MGST2Q99735 147 aa12.06□□□□□ -0.48
HDAC6-220ENST00000477528 AGMATQ9BSE5 352 aa12.06□□□□□ -0.48
HDAC6-220ENST00000477528 GSN-AS1Q9NRJ2 163 aa12.06□□□□□ -0.48
HDAC6-220ENST00000477528 CACNA1GO43497 2377 aa12.05□□□□□ -0.48
HDAC6-220ENST00000477528 M0QZK8 103 aa12.05□□□□□ -0.48
HDAC6-220ENST00000477528 GGCTO75223 188 aaKnown RBP12.05□□□□□ -0.48
HDAC6-220ENST00000477528 C3orf36Q3SXR2 165 aa12.05□□□□□ -0.48
HDAC6-220ENST00000477528 TMEM200BQ69YZ2 307 aa12.05□□□□□ -0.48
HDAC6-220ENST00000477528 ZCCHC14Q8WYQ9 949 aaKnown RBP12.05□□□□□ -0.48
HDAC6-220ENST00000477528 CYYR1Q96J86 154 aa12.05□□□□□ -0.48
HDAC6-220ENST00000477528 SGK494Q96LW2 274 aa12.05□□□□□ -0.48
HDAC6-220ENST00000477528 SSBP3Q9BWW4 388 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-220ENST00000477528 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.05□□□□□ -0.48
HDAC6-220ENST00000477528 TRAV34A0A0B4J273 112 aa12.05□□□□□ -0.48
HDAC6-220ENST00000477528 A0A1W2PRE2 83 aa12.05□□□□□ -0.48
HDAC6-220ENST00000477528 TBR1Q16650 682 aa12.05□□□□□ -0.48
HDAC6-220ENST00000477528 KIAA1644Q3SXP7 199 aa12.05□□□□□ -0.48
HDAC6-220ENST00000477528 UNQ5815/PRO19632Q6UWF5 114 aa12.05□□□□□ -0.48
HDAC6-220ENST00000477528 TEX45Q8NA69 505 aa12.05□□□□□ -0.48
HDAC6-220ENST00000477528 MAP1LC3CQ9BXW4 147 aa12.05□□□□□ -0.48
HDAC6-220ENST00000477528 KHDC1LQ5JSQ8 128 aa12.05□□□□□ -0.48
HDAC6-220ENST00000477528 OR5R1Q8NH85 324 aa12.05□□□□□ -0.48
HDAC6-220ENST00000477528 TMSB15BA0A087X1C1 80 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 BMPR1BO00238 502 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 OR5AL1P0C617 328 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 WFIKKN1Q96NZ8 548 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 NHLH1Q02575 133 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 FAM90A2PQ658T7 463 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 MYO7BQ6PIF6 2116 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 ELOVL1Q9BW60 279 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 PCNX2A6NKB5 2137 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 TCRBV4S1A1TA0A5B7 111 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 RPL7P18124 248 aaKnown RBP12.04□□□□□ -0.48
HDAC6-220ENST00000477528 FAM122AQ96E09 287 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 EAF1Q96JC9 268 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-220ENST00000477528 CHODLQ9H9P2 273 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 UTRNP46939 3433 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 IL4P05112 153 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 FAM209BQ5JX69 171 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 OR10W1Q8NGF6 305 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 SHANK1Q9Y566 2161 aa12.04□□□□□ -0.48
HDAC6-220ENST00000477528 TMEM189A5PLL7 270 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 SLC25A48Q6ZT89 311 aaKnown RBP12.03□□□□□ -0.48
HDAC6-220ENST00000477528 OCC1Q8TAD7 63 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 SLX1AQ9BQ83 275 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 HSPB8Q9UJY1 196 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 GATA4P43694 442 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 HOXA4Q00056 320 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-220ENST00000477528 PSG9Q00887 426 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 GOLT1AQ6ZVE7 132 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 PGLYRP4Q96LB8 373 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 NCOR1P1Q9H4R4 102 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 IGKV1D-33P01593 117 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 IGKV1-33P01594 117 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 SMIM17P0DL12 118 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 PPP1R27Q86WC6 154 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 PGPEP1LA6NFU8 196 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 ADIPOQQ15848 244 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 IMMP2LQ96T52 175 aa12.03□□□□□ -0.48
HDAC6-220ENST00000477528 GSX1Q9H4S2 264 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-220ENST00000477528 DPRXA6NFQ7 191 aa12.02□□□□□ -0.48
HDAC6-220ENST00000477528 G0S2P27469 103 aa12.02□□□□□ -0.48
HDAC6-220ENST00000477528 TEX38Q6PEX7 206 aa12.02□□□□□ -0.48
HDAC6-220ENST00000477528 C19orf35Q6ZS72 473 aa12.02□□□□□ -0.48
HDAC6-220ENST00000477528 RABAC1Q9UI14 185 aa12.02□□□□□ -0.48
HDAC6-220ENST00000477528 PCNX3Q9H6A9 2034 aa12.02□□□□□ -0.48
HDAC6-220ENST00000477528 NCOA6Q14686 2063 aaPredicted RBP12.02□□□□□ -0.48
HDAC6-220ENST00000477528 PRO3102Q9H379 93 aa12.02□□□□□ -0.49
HDAC6-220ENST00000477528 LYNX1G3V0Z9 82 aa12.02□□□□□ -0.49
HDAC6-220ENST00000477528 LYNX1P0DP58 116 aa12.02□□□□□ -0.49
HDAC6-220ENST00000477528 CFHR2P36980 270 aa12.02□□□□□ -0.49
HDAC6-220ENST00000477528 SLC25A33Q9BSK2 321 aa12.02□□□□□ -0.49
HDAC6-220ENST00000477528 CLEC2AQ6UVW9 174 aa12.02□□□□□ -0.49
HDAC6-220ENST00000477528 LINC01551Q86U37 167 aa12.02□□□□□ -0.49
HDAC6-220ENST00000477528 RPRMLQ8N4K4 120 aa12.02□□□□□ -0.49
HDAC6-220ENST00000477528 OR4B1Q8NGF8 309 aa12.02□□□□□ -0.49
HDAC6-220ENST00000477528 LYPD6BQ8NI32 183 aa12.02□□□□□ -0.49
HDAC6-220ENST00000477528 TMEM167AQ8TBQ9 72 aa12.02□□□□□ -0.49
HDAC6-220ENST00000477528 SRSF12Q8WXF0 261 aaKnown RBP12.02□□□□□ -0.49
HDAC6-220ENST00000477528 IGHV1-8P0DP01 117 aa12.01□□□□□ -0.49
HDAC6-220ENST00000477528 SEPSECSQ9HD40 501 aaKnown RBP12.01□□□□□ -0.49
HDAC6-220ENST00000477528 CDC42EP3Q9UKI2 254 aa12.01□□□□□ -0.49
HDAC6-220ENST00000477528 OSTCQ9NRP0 149 aa12.01□□□□□ -0.49
HDAC6-220ENST00000477528 H0YJW9 148 aa12.01□□□□□ -0.49
HDAC6-220ENST00000477528 VAMP3Q15836 100 aa12.01□□□□□ -0.49
HDAC6-220ENST00000477528 SPATA31B1PQ5VZV4 182 aa12.01□□□□□ -0.49
HDAC6-220ENST00000477528 WNT10AQ9GZT5 417 aa12.01□□□□□ -0.49
HDAC6-220ENST00000477528 CBLN4Q9NTU7 201 aa12□□□□□ -0.49
HDAC6-220ENST00000477528 FAM53AQ6NSI3 398 aaPredicted RBP12□□□□□ -0.49
HDAC6-220ENST00000477528 TECTAO75443 2155 aa12□□□□□ -0.49
HDAC6-220ENST00000477528 A0A1W2PNU3 283 aaPredicted RBP12□□□□□ -0.49
HDAC6-220ENST00000477528 NBR2O15453 112 aa12□□□□□ -0.49
HDAC6-220ENST00000477528 FOXH1O75593 365 aa12□□□□□ -0.49
HDAC6-220ENST00000477528 CEACAM8P31997 349 aaPredicted RBP12□□□□□ -0.49
HDAC6-220ENST00000477528 METTL26Q96S19 204 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms