RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 TMED4Q7Z7H5 227 aa10.2□□□□□ -0.78
ACTN4-205ENST00000477174 LGI3Q8N145 548 aa10.2□□□□□ -0.78
ACTN4-205ENST00000477174 MISP3Q96FF7 219 aa10.2□□□□□ -0.78
ACTN4-205ENST00000477174 SDHCQ99643 169 aaPredicted RBP10.2□□□□□ -0.78
ACTN4-205ENST00000477174 PALMDQ9NP74 551 aa10.2□□□□□ -0.78
ACTN4-205ENST00000477174 TECRQ9NZ01 308 aaKnown RBP10.2□□□□□ -0.78
ACTN4-205ENST00000477174 CACNG5Q9UF02 275 aa10.2□□□□□ -0.78
ACTN4-205ENST00000477174 SMAD5-AS1Q9Y6J3 95 aa10.2□□□□□ -0.78
ACTN4-205ENST00000477174 OR2T8A6NH00 312 aa10.19□□□□□ -0.78
ACTN4-205ENST00000477174 CENPXA8MT69 81 aa10.19□□□□□ -0.78
ACTN4-205ENST00000477174 A8MWP6 167 aa10.19□□□□□ -0.78
ACTN4-205ENST00000477174 MFAP4P55083 255 aa10.19□□□□□ -0.78
ACTN4-205ENST00000477174 ELLP55199 621 aaPredicted RBP10.19□□□□□ -0.78
ACTN4-205ENST00000477174 CD69Q07108 199 aa10.19□□□□□ -0.78
ACTN4-205ENST00000477174 RBMS2Q15434 407 aaKnown RBP10.19□□□□□ -0.78
ACTN4-205ENST00000477174 DEFB114Q30KQ6 69 aa10.19□□□□□ -0.78
ACTN4-205ENST00000477174 SPINK9Q5DT21 86 aa10.19□□□□□ -0.78
ACTN4-205ENST00000477174 LCN12Q6JVE5 192 aa10.19□□□□□ -0.78
ACTN4-205ENST00000477174 ADAMTSL5Q6ZMM2 481 aa10.19□□□□□ -0.78
ACTN4-205ENST00000477174 HAPLN4Q86UW8 402 aa10.19□□□□□ -0.78
ACTN4-205ENST00000477174 MARC2Q969Z3 335 aa10.19□□□□□ -0.78
ACTN4-205ENST00000477174 ZNF436Q9C0F3 470 aaPredicted RBP10.19□□□□□ -0.78
ACTN4-205ENST00000477174 ZC4H2Q9NQZ6 224 aa10.19□□□□□ -0.78
ACTN4-205ENST00000477174 UFC1Q9Y3C8 167 aa10.19□□□□□ -0.78
ACTN4-205ENST00000477174 IGHV3-21A0A0B4J1V1 117 aa10.18□□□□□ -0.78
ACTN4-205ENST00000477174 A6NHS1 94 aa10.18□□□□□ -0.78
ACTN4-205ENST00000477174 F8W735 103 aaPredicted RBP10.18□□□□□ -0.78
ACTN4-205ENST00000477174 CORTO00230 105 aa10.18□□□□□ -0.78
ACTN4-205ENST00000477174 MT-CO2P00403 227 aa10.18□□□□□ -0.78
ACTN4-205ENST00000477174 CTSGP08311 255 aa10.18□□□□□ -0.78
ACTN4-205ENST00000477174 SULT1A3P0DMM9 295 aa10.18□□□□□ -0.78
ACTN4-205ENST00000477174 SULT1A4P0DMN0 295 aa10.18□□□□□ -0.78
ACTN4-205ENST00000477174 HOXA1P49639 335 aaPredicted RBP10.18□□□□□ -0.78
ACTN4-205ENST00000477174 CCR6P51684 374 aa10.18□□□□□ -0.78
ACTN4-205ENST00000477174 Q56UQ5 140 aa10.18□□□□□ -0.78
ACTN4-205ENST00000477174 NMSQ5H8A3 153 aa10.18□□□□□ -0.78
ACTN4-205ENST00000477174 LYZL2Q7Z4W2 148 aa10.18□□□□□ -0.78
ACTN4-205ENST00000477174 CENPSQ8N2Z9 138 aa10.18□□□□□ -0.78
ACTN4-205ENST00000477174 LRTM2Q8N967 370 aa10.18□□□□□ -0.78
ACTN4-205ENST00000477174 C7orf50Q9BRJ6 194 aaKnown RBP10.18□□□□□ -0.78
ACTN4-205ENST00000477174 A0A1B0GU03 582 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 DUXBA0A1W2PPF3 345 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 TMEM213A2RRL7 107 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 NDUFA4O00483 81 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 NUPL2O15504 423 aaKnown RBP10.17□□□□□ -0.78
ACTN4-205ENST00000477174 NDUFB6O95139 128 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 NHLRC4P0CG21 123 aaPredicted RBP10.17□□□□□ -0.78
ACTN4-205ENST00000477174 C8orf88P0DMB2 117 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 RNASE2P10153 161 aaKnown RBP10.17□□□□□ -0.78
ACTN4-205ENST00000477174 IL7P13232 177 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 HTR2BP41595 481 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 NPBWR1P48145 328 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 UBE2MP61081 183 aaKnown RBP10.17□□□□□ -0.78
ACTN4-205ENST00000477174 BSXQ3C1V8 233 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 CD300EQ496F6 205 aaPredicted RBP10.17□□□□□ -0.78
ACTN4-205ENST00000477174 UNQ9165/PRO28630Q6UXU0 137 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 UBAC2Q8NBM4 344 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 DUSP18Q8NEJ0 188 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 DYNLRB2Q8TF09 96 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 PINX1Q96BK5 328 aaKnown RBP10.17□□□□□ -0.78
ACTN4-205ENST00000477174 CHRDL1Q9BU40 450 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 PRR13Q9NZ81 148 aa10.17□□□□□ -0.78
ACTN4-205ENST00000477174 MRPL27Q9P0M9 148 aaKnown RBP10.17□□□□□ -0.78
ACTN4-205ENST00000477174 IGHV3-35A0A0C4DH35 117 aa10.16□□□□□ -0.78
ACTN4-205ENST00000477174 K7EMT4 169 aa10.16□□□□□ -0.78
ACTN4-205ENST00000477174 SFT2D2O95562 160 aa10.16□□□□□ -0.78
ACTN4-205ENST00000477174 VAMP1P23763 118 aa10.16□□□□□ -0.78
ACTN4-205ENST00000477174 ADMP35318 185 aa10.16□□□□□ -0.78
ACTN4-205ENST00000477174 RELQ04864 619 aaPredicted RBP10.16□□□□□ -0.78
ACTN4-205ENST00000477174 SMCO1Q147U7 214 aa10.16□□□□□ -0.78
ACTN4-205ENST00000477174 CNPY1Q3B7I2 92 aa10.16□□□□□ -0.78
ACTN4-205ENST00000477174 TM4SF20Q53R12 229 aa10.16□□□□□ -0.78
ACTN4-205ENST00000477174 Q8N1Y9 231 aa10.16□□□□□ -0.78
ACTN4-205ENST00000477174 UXS1Q8NBZ7 420 aa10.16□□□□□ -0.78
ACTN4-205ENST00000477174 TMEM190Q8WZ59 177 aa10.16□□□□□ -0.78
ACTN4-205ENST00000477174 HIPK2Q9H2X6 1198 aa10.16□□□□□ -0.78
ACTN4-205ENST00000477174 HEYLQ9NQ87 328 aaPredicted RBP10.16□□□□□ -0.78
ACTN4-205ENST00000477174 DAZ1Q9NQZ3 744 aaKnown RBP10.16□□□□□ -0.78
ACTN4-205ENST00000477174 DNAH9Q9NYC9 4486 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 LINC00854A0A1B0GVQ3 168 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 IZUMO1RA6ND01 250 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 C15orf62A8K5M9 175 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 ZNF785A8K8V0 405 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 CEBPZOSA8MTT3 80 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 GNG7O60262 68 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 SLC25A6P12236 298 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 ATP5IP56385 69 aaPredicted RBP10.15□□□□□ -0.78
ACTN4-205ENST00000477174 TNFRSF9Q07011 255 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 PPP1R1AQ13522 171 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 ANKRD55Q3KP44 614 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 C2orf83Q53S99 150 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 GTSCR1Q86UQ5 136 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 NOXA1Q86UR1 476 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 HSPB7Q9UBY9 170 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 TMED3Q9Y3Q3 217 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 U3KQ87 197 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 COL7A1Q02388 2944 aa10.15□□□□□ -0.78
ACTN4-205ENST00000477174 TRAV25A0A0B4J276 109 aa10.14□□□□□ -0.79
ACTN4-205ENST00000477174 A8MZ25 164 aa10.14□□□□□ -0.79
ACTN4-205ENST00000477174 IGHV3-48P01763 117 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms