RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 Q6ZRG5 221 aa11.42□□□□□ -0.58
COL4A6-206ENST00000477085 NPVFQ9HCQ7 196 aa11.42□□□□□ -0.58
COL4A6-206ENST00000477085 C1RLQ9NZP8 487 aa11.42□□□□□ -0.58
COL4A6-206ENST00000477085 F11RQ9Y624 299 aaKnown RBP11.42□□□□□ -0.58
COL4A6-206ENST00000477085 MXRA5Q9NR99 2828 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 A6NDX4 124 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 MFSD2BA6NFX1 497 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 H3BUX3 64 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 HLA-DRB1P01911 266 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 CTRB1P17538 263 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 KRTAP1-1Q07627 177 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 CTRB2Q6GPI1 263 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 LYPD6BQ8NI32 183 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 RNASEH2CQ8TDP1 164 aaKnown RBP11.41□□□□□ -0.58
COL4A6-206ENST00000477085 ARPC1AQ92747 370 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 SRSF8Q9BRL6 282 aaKnown RBP11.41□□□□□ -0.58
COL4A6-206ENST00000477085 SLC25A33Q9BSK2 321 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 PARP11Q9NR21 331 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 RPRMQ9NS64 109 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 TIMM9Q9Y5J7 89 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 FNDC10F2Z333 226 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 GPX4P36969 197 aaPredicted RBP11.41□□□□□ -0.58
COL4A6-206ENST00000477085 RAB5CP51148 216 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 SUB1P53999 127 aaKnown RBP eCLIP11.41□□□□□ -0.58
COL4A6-206ENST00000477085 LY6EQ16553 131 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 OR1P1Q8NH06 330 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 FAM213BQ8TBF2 198 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 RASL11BQ9BPW5 248 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 WNT10AQ9GZT5 417 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 HRH4Q9H3N8 390 aa11.41□□□□□ -0.58
COL4A6-206ENST00000477085 ABCA1O95477 2261 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 UMAD1C9J7I0 102 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 TRIM77I1YAP6 450 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 I3L521 148 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 PRH1P02810 166 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 CRYGCP07315 174 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 ELLP55199 621 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-206ENST00000477085 SERF2P84101 59 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 ZNF726P1Q15940 193 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 SSX7Q7RTT5 188 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 SLC16A13Q7RTY0 426 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 HSD17B13Q7Z5P4 300 aaPredicted RBP11.4□□□□□ -0.58
COL4A6-206ENST00000477085 NANPQ8TBE9 248 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 ABHD5Q8WTS1 349 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 CACNG8Q8WXS5 425 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 GGTLC1Q9BX51 225 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 PFDN2Q9UHV9 154 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 CREBBPQ92793 2442 aa11.4□□□□□ -0.58
COL4A6-206ENST00000477085 EIF3GO75821 320 aaKnown RBP eCLIP11.39□□□□□ -0.59
COL4A6-206ENST00000477085 CAMLGP49069 296 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 BPIFB3P59826 476 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 TMEM144Q7Z5S9 345 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 LFNGQ8NES3 379 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 MISP3Q96FF7 219 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 ZNF48Q96MX3 618 aaPredicted RBP11.39□□□□□ -0.59
COL4A6-206ENST00000477085 CSPG4Q6UVK1 2322 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 FLNAP21333 2647 aaKnown RBP11.39□□□□□ -0.59
COL4A6-206ENST00000477085 IGHV3-21A0A0B4J1V1 117 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 AGPAT2O15120 278 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 YIF1AO95070 293 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 IGHV4-59P01825 116 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 OPRK1P41145 380 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 RAB2AP61019 212 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 BLOC1S1P78537 153 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 AKR1C1Q04828 323 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 GCSAMLQ5JQS6 135 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 AKR1C8PQ5T2L2 129 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 SPSB3Q6PJ21 355 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 TEPPQ6URK8 271 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 C9orf139Q6ZV77 190 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 MRPL41Q8IXM3 137 aaKnown RBP11.39□□□□□ -0.59
COL4A6-206ENST00000477085 RPP25LQ8N5L8 163 aaKnown RBP11.39□□□□□ -0.59
COL4A6-206ENST00000477085 MOB4Q9Y3A3 225 aa11.39□□□□□ -0.59
COL4A6-206ENST00000477085 IGKV1D-37A0A075B6S9 117 aa11.38□□□□□ -0.59
COL4A6-206ENST00000477085 MPDU1O75352 247 aa11.38□□□□□ -0.59
COL4A6-206ENST00000477085 DEFA4P12838 97 aa11.38□□□□□ -0.59
COL4A6-206ENST00000477085 CCL20P78556 96 aa11.38□□□□□ -0.59
COL4A6-206ENST00000477085 SRSF3P84103 164 aaKnown RBP11.38□□□□□ -0.59
COL4A6-206ENST00000477085 ZNF616Q08AN1 781 aa11.38□□□□□ -0.59
COL4A6-206ENST00000477085 FFAR4Q5NUL3 377 aa11.38□□□□□ -0.59
COL4A6-206ENST00000477085 MIC13Q5XKP0 118 aa11.38□□□□□ -0.59
COL4A6-206ENST00000477085 TTC9CQ8N5M4 171 aa11.38□□□□□ -0.59
COL4A6-206ENST00000477085 NPIPB3Q92617 1050 aa11.38□□□□□ -0.59
COL4A6-206ENST00000477085 FANCD2OSQ96PS1 177 aa11.38□□□□□ -0.59
COL4A6-206ENST00000477085 NPIPB5A8MRT5 1133 aa11.37□□□□□ -0.59
COL4A6-206ENST00000477085 I3L2K1 104 aa11.37□□□□□ -0.59
COL4A6-206ENST00000477085 ATP6V0E1O15342 81 aa11.37□□□□□ -0.59
COL4A6-206ENST00000477085 MT-CO2P00403 227 aa11.37□□□□□ -0.59
COL4A6-206ENST00000477085 LINC00869P0C866 280 aa11.37□□□□□ -0.59
COL4A6-206ENST00000477085 IER3P46695 156 aa11.37□□□□□ -0.59
COL4A6-206ENST00000477085 TMEM41BQ5BJD5 291 aa11.37□□□□□ -0.59
COL4A6-206ENST00000477085 Q6ZS46 218 aa11.37□□□□□ -0.59
COL4A6-206ENST00000477085 IL17RELQ6ZVW7 336 aa11.37□□□□□ -0.59
COL4A6-206ENST00000477085 EIF4E3Q8N5X7 224 aaKnown RBP11.37□□□□□ -0.59
COL4A6-206ENST00000477085 ZNF709Q8N972 641 aa11.37□□□□□ -0.59
COL4A6-206ENST00000477085 OR5T1Q8NG75 326 aa11.37□□□□□ -0.59
COL4A6-206ENST00000477085 SGMS2Q8NHU3 365 aa11.37□□□□□ -0.59
COL4A6-206ENST00000477085 MARC2Q969Z3 335 aa11.37□□□□□ -0.59
COL4A6-206ENST00000477085 ACY3Q96HD9 319 aa11.37□□□□□ -0.59
COL4A6-206ENST00000477085 SLC45A2Q9UMX9 530 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms