RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 LHFPL5Q8TAF8 219 aa10.44□□□□□ -0.74
FAM3A-218ENST00000475657 ZC4H2Q9NQZ6 224 aa10.44□□□□□ -0.74
FAM3A-218ENST00000475657 MARCH11A6NNE9 402 aa10.43□□□□□ -0.74
FAM3A-218ENST00000475657 SRRM4A7MD48 611 aaKnown RBP10.43□□□□□ -0.74
FAM3A-218ENST00000475657 CRYGBP07316 175 aa10.43□□□□□ -0.74
FAM3A-218ENST00000475657 AKR1C2P52895 323 aa10.43□□□□□ -0.74
FAM3A-218ENST00000475657 UBE2KP61086 200 aa10.43□□□□□ -0.74
FAM3A-218ENST00000475657 ERVK-16P61578 105 aa10.43□□□□□ -0.74
FAM3A-218ENST00000475657 DEFB114Q30KQ6 69 aa10.43□□□□□ -0.74
FAM3A-218ENST00000475657 FAM219AQ8IW50 185 aa10.43□□□□□ -0.74
FAM3A-218ENST00000475657 TMEM217Q8N7C4 229 aa10.43□□□□□ -0.74
FAM3A-218ENST00000475657 SLC35G3Q8N808 338 aa10.43□□□□□ -0.74
FAM3A-218ENST00000475657 VSTM2AQ8TAG5 236 aa10.43□□□□□ -0.74
FAM3A-218ENST00000475657 PHLDA1Q8WV24 401 aaPredicted RBP10.43□□□□□ -0.74
FAM3A-218ENST00000475657 LSM10Q969L4 123 aaKnown RBP10.43□□□□□ -0.74
FAM3A-218ENST00000475657 SEC22AQ96IW7 307 aa10.43□□□□□ -0.74
FAM3A-218ENST00000475657 COA4Q9NYJ1 87 aa10.43□□□□□ -0.74
FAM3A-218ENST00000475657 PRR13Q9NZ81 148 aa10.43□□□□□ -0.74
FAM3A-218ENST00000475657 TMED3Q9Y3Q3 217 aa10.43□□□□□ -0.74
FAM3A-218ENST00000475657 DNAH17Q9UFH2 4485 aa10.43□□□□□ -0.74
FAM3A-218ENST00000475657 LOC102724200A0A096LPH7 203 aaPredicted RBP10.42□□□□□ -0.74
FAM3A-218ENST00000475657 A0A1B0GVY2 172 aa10.42□□□□□ -0.74
FAM3A-218ENST00000475657 DBX1A6NMT0 343 aa10.42□□□□□ -0.74
FAM3A-218ENST00000475657 SSNA1O43805 119 aa10.42□□□□□ -0.74
FAM3A-218ENST00000475657 RBMXL2O75526 392 aaKnown RBP10.42□□□□□ -0.74
FAM3A-218ENST00000475657 KRASP01116 189 aa10.42□□□□□ -0.74
FAM3A-218ENST00000475657 SAA1P0DJI8 122 aaPredicted RBP10.42□□□□□ -0.74
FAM3A-218ENST00000475657 PRR20EP86478 221 aa10.42□□□□□ -0.74
FAM3A-218ENST00000475657 PRR20CP86479 221 aa10.42□□□□□ -0.74
FAM3A-218ENST00000475657 PRR20DP86480 221 aa10.42□□□□□ -0.74
FAM3A-218ENST00000475657 PRR20BP86481 221 aa10.42□□□□□ -0.74
FAM3A-218ENST00000475657 PRR20AP86496 221 aa10.42□□□□□ -0.74
FAM3A-218ENST00000475657 VMA21Q3ZAQ7 101 aa10.42□□□□□ -0.74
FAM3A-218ENST00000475657 Q6ZWC4 215 aa10.42□□□□□ -0.74
FAM3A-218ENST00000475657 SLC16A13Q7RTY0 426 aa10.42□□□□□ -0.74
FAM3A-218ENST00000475657 RRNAD1Q96FB5 475 aaKnown RBP10.42□□□□□ -0.74
FAM3A-218ENST00000475657 USMG5Q96IX5 58 aa10.42□□□□□ -0.74
FAM3A-218ENST00000475657 MSGN1A6NI15 193 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 IFNA21P01568 189 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 IGKV1-5P01602 117 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 PRH1P02810 166 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 FGF2P09038 288 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 P0C879 139 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 G6PCP35575 357 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 MRGPRG-AS1Q2M3A8 158 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 NMSQ5H8A3 153 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 OR4A47Q6IF82 309 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 LYZL2Q7Z4W2 148 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 PUSL1Q8N0Z8 303 aaKnown RBP10.41□□□□□ -0.74
FAM3A-218ENST00000475657 DMBX1Q8NFW5 382 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 OR4A5Q8NH83 315 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 RNASE11Q8TAA1 199 aaKnown RBP10.41□□□□□ -0.74
FAM3A-218ENST00000475657 TMEM68Q96MH6 324 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 TMEM140Q9NV12 185 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 BET1LQ9NYM9 111 aa10.41□□□□□ -0.74
FAM3A-218ENST00000475657 TECRQ9NZ01 308 aaKnown RBP10.41□□□□□ -0.74
FAM3A-218ENST00000475657 HLA-GP17693 338 aa10.4□□□□□ -0.74
FAM3A-218ENST00000475657 TCTAP57738 103 aa10.4□□□□□ -0.74
FAM3A-218ENST00000475657 TNXAQ16473 311 aa10.4□□□□□ -0.74
FAM3A-218ENST00000475657 GUCA2BQ16661 112 aa10.4□□□□□ -0.74
FAM3A-218ENST00000475657 H2BFWTQ7Z2G1 175 aa10.4□□□□□ -0.74
FAM3A-218ENST00000475657 VKORC1L1Q8N0U8 176 aa10.4□□□□□ -0.74
FAM3A-218ENST00000475657 TEX45Q8NA69 505 aa10.4□□□□□ -0.74
FAM3A-218ENST00000475657 UXS1Q8NBZ7 420 aa10.4□□□□□ -0.74
FAM3A-218ENST00000475657 DYNLRB2Q8TF09 96 aa10.4□□□□□ -0.74
FAM3A-218ENST00000475657 OR2A7Q96R45 310 aa10.4□□□□□ -0.74
FAM3A-218ENST00000475657 SPIN2AQ99865 258 aa10.4□□□□□ -0.74
FAM3A-218ENST00000475657 SPIN2BQ9BPZ2 258 aa10.4□□□□□ -0.74
FAM3A-218ENST00000475657 KRTAP4-5Q9BYR2 181 aa10.4□□□□□ -0.74
FAM3A-218ENST00000475657 SPRY2O43597 315 aa10.39□□□□□ -0.75
FAM3A-218ENST00000475657 ADAP1O75689 374 aa10.39□□□□□ -0.75
FAM3A-218ENST00000475657 KBTBD11O94819 623 aa10.39□□□□□ -0.75
FAM3A-218ENST00000475657 IL6RP08887 468 aaPredicted RBP10.39□□□□□ -0.75
FAM3A-218ENST00000475657 HOXB5P09067 269 aa10.39□□□□□ -0.75
FAM3A-218ENST00000475657 SLC25A6P12236 298 aa10.39□□□□□ -0.75
FAM3A-218ENST00000475657 RRAS2P62070 204 aaPredicted RBP10.39□□□□□ -0.75
FAM3A-218ENST00000475657 GGNBP1Q5YKI7 109 aa10.39□□□□□ -0.75
FAM3A-218ENST00000475657 SSX9Q7RTT3 188 aa10.39□□□□□ -0.75
FAM3A-218ENST00000475657 TMEM167AQ8TBQ9 72 aa10.39□□□□□ -0.75
FAM3A-218ENST00000475657 MED28Q9H204 178 aa10.39□□□□□ -0.75
FAM3A-218ENST00000475657 SELENOKQ9Y6D0 94 aa10.39□□□□□ -0.75
FAM3A-218ENST00000475657 A0A0G2JRQ6 117 aa10.38□□□□□ -0.75
FAM3A-218ENST00000475657 A0A1B0GU03 582 aa10.38□□□□□ -0.75
FAM3A-218ENST00000475657 UPK2O00526 184 aa10.38□□□□□ -0.75
FAM3A-218ENST00000475657 SULT1A3P0DMM9 295 aa10.38□□□□□ -0.75
FAM3A-218ENST00000475657 SULT1A4P0DMN0 295 aa10.38□□□□□ -0.75
FAM3A-218ENST00000475657 C10orf55Q5SWW7 151 aa10.38□□□□□ -0.75
FAM3A-218ENST00000475657 THOC7Q6I9Y2 204 aaKnown RBP10.38□□□□□ -0.75
FAM3A-218ENST00000475657 MGAT4CQ9UBM8 478 aa10.38□□□□□ -0.75
FAM3A-218ENST00000475657 CACFD1Q9UGQ2 172 aa10.38□□□□□ -0.75
FAM3A-218ENST00000475657 C15orf61A6NNL5 157 aa10.37□□□□□ -0.75
FAM3A-218ENST00000475657 UBE2CO00762 179 aa10.37□□□□□ -0.75
FAM3A-218ENST00000475657 CCSO14618 274 aa10.37□□□□□ -0.75
FAM3A-218ENST00000475657 GOSR2O14653 212 aa10.37□□□□□ -0.75
FAM3A-218ENST00000475657 SNAPC5O75971 98 aa10.37□□□□□ -0.75
FAM3A-218ENST00000475657 OR9G9P0C7N8 305 aa10.37□□□□□ -0.75
FAM3A-218ENST00000475657 TRAPPC2P0DI81 140 aa10.37□□□□□ -0.75
FAM3A-218ENST00000475657 TRAPPC2BP0DI82 140 aa10.37□□□□□ -0.75
FAM3A-218ENST00000475657 RPL8P62917 257 aaKnown RBP10.37□□□□□ -0.75
FAM3A-218ENST00000475657 SMCO1Q147U7 214 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms