RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 HSPE1P61604 102 aaKnown RBP5.16□□□□□ -1.58
HDAC3-207ENST00000475549 TSPAN5P62079 268 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 PRCDQ00LT1 54 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 PMS2P11Q13670 270 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 CTF1Q16619 201 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 MLANAQ16655 118 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 LAMTOR1Q6IAA8 161 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 CEMP1Q6PRD7 247 aaPredicted RBP5.16□□□□□ -1.58
HDAC3-207ENST00000475549 TOMM20LQ6UXN7 152 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 Q6ZRM9 215 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 LHFPL1Q86WI0 220 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 KIR2DL5AQ8N109 375 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 KIR2DL5BQ8NHK3 375 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 MISP3Q96FF7 219 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 TMEM56Q96MV1 263 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 CMTM3Q96MX0 182 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 TP53RKQ96S44 253 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 ABHD1Q96SE0 405 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 SCPEP1Q9HB40 452 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 MRPL36Q9P0J6 103 aaKnown RBP5.16□□□□□ -1.58
HDAC3-207ENST00000475549 KLK11Q9UBX7 282 aa5.16□□□□□ -1.58
HDAC3-207ENST00000475549 FRAS1Q86XX4 4008 aa5.15□□□□□ -1.58
HDAC3-207ENST00000475549 IGKV3-7A0A075B6H7 116 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 TRAV14DV4A0A0A6YYC5 116 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 A0A0G2JRQ6 117 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 A0A1B0GU03 582 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 SMIM31A0A1B0GVY4 71 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 CXorf65A6NEN9 183 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 OR4C46A6NHA9 309 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 NUPL2O15504 423 aaKnown RBP5.15□□□□□ -1.59
HDAC3-207ENST00000475549 CYB5BO43169 146 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 YIF1AO95070 293 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 LY6G6CO95867 125 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 CD3DP04234 171 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 ATF4P18848 351 aaPredicted RBP5.15□□□□□ -1.59
HDAC3-207ENST00000475549 ETV6P41212 452 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 TFPI2P48307 235 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 APOC4P55056 127 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 MFAP4P55083 255 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 RELQ04864 619 aaPredicted RBP5.15□□□□□ -1.59
HDAC3-207ENST00000475549 SP6Q3SY56 376 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 RNASE12Q5GAN4 147 aaKnown RBP5.15□□□□□ -1.59
HDAC3-207ENST00000475549 LPCAT3Q6P1A2 487 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 H2BFWTQ7Z2G1 175 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 GBGT1Q8N5D6 347 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 RPP25LQ8N5L8 163 aaKnown RBP5.15□□□□□ -1.59
HDAC3-207ENST00000475549 FAM24BQ8N5W8 94 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 STPG3Q8N7X2 389 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 OR52I2Q8NH67 350 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 OR4A16Q8NH70 328 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 ST8SIA2Q92186 375 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 PINX1Q96BK5 328 aaKnown RBP5.15□□□□□ -1.59
HDAC3-207ENST00000475549 TSC22D3Q99576 134 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 TXN2Q99757 166 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 CSTL1Q9H114 145 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 VSIRQ9H7M9 311 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 KMT2AQ03164 3969 aa5.15□□□□□ -1.59
HDAC3-207ENST00000475549 IGHV3-66A0A0C4DH42 116 aa5.14□□□□□ -1.59
HDAC3-207ENST00000475549 INS-IGF2F8WCM5 200 aa5.14□□□□□ -1.59
HDAC3-207ENST00000475549 ST8SIA3O43173 380 aa5.14□□□□□ -1.59
HDAC3-207ENST00000475549 DFFBO76075 338 aa5.14□□□□□ -1.59
HDAC3-207ENST00000475549 TNFAIP8O95379 198 aa5.14□□□□□ -1.59
HDAC3-207ENST00000475549 TMEM50AO95807 157 aa5.14□□□□□ -1.59
HDAC3-207ENST00000475549 GIG44P09565 113 aaPredicted RBP5.14□□□□□ -1.59
HDAC3-207ENST00000475549 RNASE2P10153 161 aaKnown RBP5.14□□□□□ -1.59
HDAC3-207ENST00000475549 RCVRNP35243 200 aa5.14□□□□□ -1.59
HDAC3-207ENST00000475549 RORCP51449 518 aa5.14□□□□□ -1.59
HDAC3-207ENST00000475549 PIGPP57054 158 aa5.14□□□□□ -1.59
HDAC3-207ENST00000475549 RND3P61587 244 aa5.14□□□□□ -1.59
HDAC3-207ENST00000475549 GALNT14Q96FL9 552 aa5.14□□□□□ -1.59
HDAC3-207ENST00000475549 FNDC4Q9H6D8 234 aaPredicted RBP5.14□□□□□ -1.59
HDAC3-207ENST00000475549 PUS1Q9Y606 427 aaKnown RBP eCLIP5.14□□□□□ -1.59
HDAC3-207ENST00000475549 ALMS1Q8TCU4 4167 aa5.14□□□□□ -1.59
HDAC3-207ENST00000475549 C3orf85A0A1B0GTC6 90 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 NUPR2A6NF83 97 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 DEFB4AO15263 64 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 GNG7O60262 68 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 CD74P04233 296 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 SMIM18P0DKX4 95 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 PGAM2P15259 253 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 PPP5CP53041 499 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 NANOS2P60321 138 aaKnown RBP5.13□□□□□ -1.59
HDAC3-207ENST00000475549 ERHP84090 104 aaKnown RBP5.13□□□□□ -1.59
HDAC3-207ENST00000475549 BSXQ3C1V8 233 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 AARDQ4LEZ3 155 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 LEMD1Q68G75 181 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 TCF24Q7RTU0 167 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 DUSP18Q8NEJ0 188 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 OR13C8Q8NGS7 320 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 TERB2Q8NHR7 220 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 LHFPL5Q8TAF8 219 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 ZNF486Q96H40 463 aaPredicted RBP5.13□□□□□ -1.59
HDAC3-207ENST00000475549 RTBDNQ9BSG5 229 aaPredicted RBP5.13□□□□□ -1.59
HDAC3-207ENST00000475549 MS4A6AQ9H2W1 248 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 MIXL1Q9H2W2 232 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 MTFP1Q9UDX5 166 aa5.13□□□□□ -1.59
HDAC3-207ENST00000475549 MPTX1A8MV57 137 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 FAM25AB3EWG3 89 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 FAM25CB3EWG5 89 aa5.12□□□□□ -1.59
HDAC3-207ENST00000475549 FAM25GB3EWG6 89 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms