RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 ZNF331Q9NQX6 463 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 CLEC5AQ9NY25 188 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 SAA2-SAA4A0A096LPE2 208 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 C15orf61A6NNL5 157 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 ADH4P08319 380 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 CECR9P0C854 216 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 SAA2P0DJI9 122 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 LOXL3P58215 753 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 PRR20EP86478 221 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 PRR20CP86479 221 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 PRR20DP86480 221 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 PRR20BP86481 221 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 PRR20AP86496 221 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 CT45A1Q5HYN5 189 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 STUMQ69YW2 141 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 TRAT1Q6PIZ9 186 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 ZNF439Q8NDP4 499 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 CT45A3Q8NHU0 189 aa11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 SNRNP40Q96DI7 357 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-217ENST00000475255 CBY3A6NI87 242 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 PRRX1P54821 245 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 SSBP2P81877 361 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 TCTEX1D1Q8N7M0 179 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 OR52E5Q8NH55 327 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 M0R2Z0 102 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 CORTO00230 105 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 IGKV1-16P04430 117 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 AREGP15514 252 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 TMPRSS3P57727 454 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 LEMD1Q68G75 181 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 SPATA12Q7Z6I5 190 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 FAM90A1Q86YD7 464 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 OR4C5Q8NGB2 326 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 C18orf32Q8TCD1 76 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 IDI2-AS1Q9NZ38 188 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 OR51B2Q9Y5P1 312 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 AMY1AP04745 511 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 FOXA3P55318 350 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 HSPE1P61604 102 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 EBLN2Q6P2I7 272 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 ZC2HC1AQ96GY0 325 aa11.22□□□□□ -0.61
SEMA4D-217ENST00000475255 KALRNO60229 2985 aa11.21□□□□□ -0.61
SEMA4D-217ENST00000475255 KLRC4-KLRK1H3BQV0 150 aa11.21□□□□□ -0.61
SEMA4D-217ENST00000475255 MMP23AO75900 390 aa11.21□□□□□ -0.61
SEMA4D-217ENST00000475255 TSPOP30536 169 aa11.21□□□□□ -0.61
SEMA4D-217ENST00000475255 MOGAT3Q86VF5 341 aa11.21□□□□□ -0.61
SEMA4D-217ENST00000475255 WDR31Q8NA23 367 aa11.21□□□□□ -0.61
SEMA4D-217ENST00000475255 OR2T6Q8NHC8 308 aa11.21□□□□□ -0.61
SEMA4D-217ENST00000475255 ARL2-SNX15V9GYD0 113 aa11.21□□□□□ -0.61
SEMA4D-217ENST00000475255 SRRM4A7MD48 611 aaKnown RBP11.21□□□□□ -0.62
SEMA4D-217ENST00000475255 J3QR06 171 aa11.21□□□□□ -0.62
SEMA4D-217ENST00000475255 TNFSF15O95150 251 aa11.21□□□□□ -0.62
SEMA4D-217ENST00000475255 HOXC12P31275 282 aa11.21□□□□□ -0.62
SEMA4D-217ENST00000475255 GNG5P63218 68 aa11.21□□□□□ -0.62
SEMA4D-217ENST00000475255 CFAP161Q6P656 301 aa11.21□□□□□ -0.62
SEMA4D-217ENST00000475255 MGAQ8IWI9 3026 aa11.21□□□□□ -0.62
SEMA4D-217ENST00000475255 CALYQ9NYX4 217 aa11.21□□□□□ -0.62
SEMA4D-217ENST00000475255 H3BTX0 84 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 SPRY3O43610 288 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 TCTAP57738 103 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 WDR73Q6P4I2 378 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 SPACA3Q8IXA5 215 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 OR4S2Q8NH73 311 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 BET1LQ9NYM9 111 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 TNRC18O15417 2968 aaPredicted RBP11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 TECTAO75443 2155 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 TRAV9-1A0A075B6T8 112 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 UBE2L3P68036 154 aaKnown RBP11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 PRR7Q8TB68 274 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 KLF13Q9Y2Y9 288 aaPredicted RBP11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 IGLL1P15814 213 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 OR10J3Q5JRS4 329 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 LINC00173Q6ZV60 143 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 GCSAMQ8N6F7 178 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 OR2D3Q8NGH3 330 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 PMCHL2Q9BQD1 86 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 ALKBH7Q9BT30 221 aaPredicted RBP11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 OSTCQ9NRP0 149 aa11.2□□□□□ -0.62
SEMA4D-217ENST00000475255 RPL19P84098 196 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-217ENST00000475255 AARDQ4LEZ3 155 aa11.19□□□□□ -0.62
SEMA4D-217ENST00000475255 C22orf15Q8WYQ4 148 aa11.19□□□□□ -0.62
SEMA4D-217ENST00000475255 JPT1Q9UK76 154 aa11.19□□□□□ -0.62
SEMA4D-217ENST00000475255 TRBV9A0A0B4J1U6 114 aa11.19□□□□□ -0.62
SEMA4D-217ENST00000475255 REG1BP48304 166 aa11.19□□□□□ -0.62
SEMA4D-217ENST00000475255 KLHDC1Q8N7A1 406 aa11.19□□□□□ -0.62
SEMA4D-217ENST00000475255 MDS2Q8NDY4 140 aa11.19□□□□□ -0.62
SEMA4D-217ENST00000475255 ZNF738Q8NE65 137 aa11.19□□□□□ -0.62
SEMA4D-217ENST00000475255 DDB2Q92466 427 aa11.19□□□□□ -0.62
SEMA4D-217ENST00000475255 NEUROG1Q92886 237 aa11.19□□□□□ -0.62
SEMA4D-217ENST00000475255 TMEM167BQ9NRX6 74 aa11.19□□□□□ -0.62
SEMA4D-217ENST00000475255 ADGRG4Q8IZF6 3080 aa11.19□□□□□ -0.62
SEMA4D-217ENST00000475255 TACC2O95359 2948 aa11.18□□□□□ -0.62
SEMA4D-217ENST00000475255 SNAI2O43623 268 aa11.18□□□□□ -0.62
SEMA4D-217ENST00000475255 HLA-DQA1P01909 254 aa11.18□□□□□ -0.62
SEMA4D-217ENST00000475255 MT-ND6P03923 174 aa11.18□□□□□ -0.62
SEMA4D-217ENST00000475255 OR8B2Q96RD0 313 aa11.18□□□□□ -0.62
SEMA4D-217ENST00000475255 TMEM14BQ9NUH8 114 aa11.18□□□□□ -0.62
SEMA4D-217ENST00000475255 VWC2LB2RUY7 222 aa11.18□□□□□ -0.62
SEMA4D-217ENST00000475255 ISLRO14498 428 aa11.18□□□□□ -0.62
SEMA4D-217ENST00000475255 TOX4O94842 621 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms