RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 A0A0A6YYH2 397 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 A0A1W2PS18 150 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 A6NJ64 397 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 I3L2K1 104 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 RTL8CO15255 209 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 RLN1P04808 185 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 PTHLHP12272 177 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 NPY1RP25929 384 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 CBX5P45973 191 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 SCAND1P57086 179 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 TRPT1Q86TN4 253 aaKnown RBP9.12□□□□□ -0.95
SKA3-206ENST00000475251 CMTM1Q8IZ96 169 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 ZNF114Q8NC26 417 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 OR5AP2Q8NGF4 316 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 LGALS14Q8TCE9 139 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 GRAMD2BQ96HH9 432 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 TMEM14BQ9NUH8 114 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 RABAC1Q9UI14 185 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 DAPK2Q9UIK4 370 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 TBC1D24Q9ULP9 559 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 MUC4Q99102 2169 aa9.12□□□□□ -0.95
SKA3-206ENST00000475251 DNAH2Q9P225 4427 aa9.11□□□□□ -0.95
SKA3-206ENST00000475251 TRAV18A0A075B6X5 111 aa9.11□□□□□ -0.95
SKA3-206ENST00000475251 SMIM30A4D0T7 59 aa9.11□□□□□ -0.95
SKA3-206ENST00000475251 MT-CO2P00403 227 aa9.11□□□□□ -0.95
SKA3-206ENST00000475251 GNRHRP30968 328 aa9.11□□□□□ -0.95
SKA3-206ENST00000475251 G6PCP35575 357 aa9.11□□□□□ -0.95
SKA3-206ENST00000475251 LPAR6P43657 344 aa9.11□□□□□ -0.95
SKA3-206ENST00000475251 NPBWR1P48145 328 aa9.11□□□□□ -0.95
SKA3-206ENST00000475251 TOMM20LQ6UXN7 152 aa9.11□□□□□ -0.95
SKA3-206ENST00000475251 ZNF600Q6ZNG1 722 aa9.11□□□□□ -0.95
SKA3-206ENST00000475251 FCAMRQ8WWV6 532 aa9.11□□□□□ -0.95
SKA3-206ENST00000475251 NSG2Q9Y328 171 aa9.11□□□□□ -0.95
SKA3-206ENST00000475251 X6R8D5 127 aa9.11□□□□□ -0.95
SKA3-206ENST00000475251 ELOA3CA0A087WX78 387 aaPredicted RBP9.1□□□□□ -0.95
SKA3-206ENST00000475251 M0R2N4 97 aa9.1□□□□□ -0.95
SKA3-206ENST00000475251 SCGB2A1O75556 95 aa9.1□□□□□ -0.95
SKA3-206ENST00000475251 PGLYRP1O75594 196 aaPredicted RBP9.1□□□□□ -0.95
SKA3-206ENST00000475251 IFNA10P01566 189 aa9.1□□□□□ -0.95
SKA3-206ENST00000475251 IFNA21P01568 189 aa9.1□□□□□ -0.95
SKA3-206ENST00000475251 IFNA17P01571 189 aa9.1□□□□□ -0.95
SKA3-206ENST00000475251 NPPCP23582 126 aa9.1□□□□□ -0.95
SKA3-206ENST00000475251 FGF9P31371 208 aaPredicted RBP9.1□□□□□ -0.95
SKA3-206ENST00000475251 EIF2B2P49770 351 aaKnown RBP9.1□□□□□ -0.95
SKA3-206ENST00000475251 ERHP84090 104 aaKnown RBP9.1□□□□□ -0.95
SKA3-206ENST00000475251 KCTD21Q4G0X4 260 aa9.1□□□□□ -0.95
SKA3-206ENST00000475251 SFXN4Q6P4A7 337 aa9.1□□□□□ -0.95
SKA3-206ENST00000475251 PINX1Q96BK5 328 aaKnown RBP9.1□□□□□ -0.95
SKA3-206ENST00000475251 MOB3AQ96BX8 217 aa9.1□□□□□ -0.95
SKA3-206ENST00000475251 NARS2Q96I59 477 aaKnown RBP9.1□□□□□ -0.95
SKA3-206ENST00000475251 C1QTNF4Q9BXJ3 329 aa9.1□□□□□ -0.95
SKA3-206ENST00000475251 DIABLOQ9NR28 239 aa9.1□□□□□ -0.95
SKA3-206ENST00000475251 RRP15Q9Y3B9 282 aaKnown RBP9.1□□□□□ -0.95
SKA3-206ENST00000475251 IGHV3-66A0A0C4DH42 116 aa9.09□□□□□ -0.95
SKA3-206ENST00000475251 GIG44P09565 113 aaPredicted RBP9.09□□□□□ -0.95
SKA3-206ENST00000475251 S100GP29377 79 aa9.09□□□□□ -0.95
SKA3-206ENST00000475251 AQP4P55087 323 aa9.09□□□□□ -0.95
SKA3-206ENST00000475251 NUTF2P61970 127 aaKnown RBP9.09□□□□□ -0.95
SKA3-206ENST00000475251 UBE2UQ5VVX9 321 aa9.09□□□□□ -0.95
SKA3-206ENST00000475251 UBE2DNLQ8IWF7 75 aa9.09□□□□□ -0.95
SKA3-206ENST00000475251 FAM24BQ8N5W8 94 aa9.09□□□□□ -0.95
SKA3-206ENST00000475251 STXBP6Q8NFX7 210 aa9.09□□□□□ -0.95
SKA3-206ENST00000475251 OR4A16Q8NH70 328 aa9.09□□□□□ -0.95
SKA3-206ENST00000475251 IFT46Q9NQC8 304 aa9.09□□□□□ -0.95
SKA3-206ENST00000475251 FAM212BQ9NTI7 297 aaPredicted RBP9.09□□□□□ -0.95
SKA3-206ENST00000475251 TXNL4BQ9NX01 149 aaKnown RBP9.09□□□□□ -0.95
SKA3-206ENST00000475251 EHFQ9NZC4 300 aa9.09□□□□□ -0.95
SKA3-206ENST00000475251 PUS1Q9Y606 427 aaKnown RBP eCLIP9.09□□□□□ -0.95
SKA3-206ENST00000475251 ABCA13Q86UQ4 5058 aa9.08□□□□□ -0.96
SKA3-206ENST00000475251 K7EQG2 157 aa9.08□□□□□ -0.96
SKA3-206ENST00000475251 APOHP02749 345 aaPredicted RBP9.08□□□□□ -0.96
SKA3-206ENST00000475251 C4BPBP20851 252 aa9.08□□□□□ -0.96
SKA3-206ENST00000475251 PRCDQ00LT1 54 aa9.08□□□□□ -0.96
SKA3-206ENST00000475251 C12orf74Q32Q52 190 aa9.08□□□□□ -0.96
SKA3-206ENST00000475251 DHRS11Q6UWP2 260 aa9.08□□□□□ -0.96
SKA3-206ENST00000475251 METTL26Q96S19 204 aa9.08□□□□□ -0.96
SKA3-206ENST00000475251 DNAH17Q9UFH2 4485 aa9.07□□□□□ -0.96
SKA3-206ENST00000475251 DYNC1H1Q14204 4646 aaKnown RBP9.07□□□□□ -0.96
SKA3-206ENST00000475251 CORTO00230 105 aa9.07□□□□□ -0.96
SKA3-206ENST00000475251 GPR31O00270 319 aa9.07□□□□□ -0.96
SKA3-206ENST00000475251 IGHV3-48P01763 117 aa9.07□□□□□ -0.96
SKA3-206ENST00000475251 FCER2P06734 321 aa9.07□□□□□ -0.96
SKA3-206ENST00000475251 ZNF688P0C7X2 276 aa9.07□□□□□ -0.96
SKA3-206ENST00000475251 ACTL10Q5JWF8 245 aa9.07□□□□□ -0.96
SKA3-206ENST00000475251 H2BFWTQ7Z2G1 175 aa9.07□□□□□ -0.96
SKA3-206ENST00000475251 LILRB2Q8N423 598 aa9.07□□□□□ -0.96
SKA3-206ENST00000475251 CSNK1G2-AS1Q8NCQ2 148 aa9.07□□□□□ -0.96
SKA3-206ENST00000475251 FAM210BQ96KR6 192 aa9.07□□□□□ -0.96
SKA3-206ENST00000475251 ZNF2Q9BSG1 426 aaPredicted RBP9.07□□□□□ -0.96
SKA3-206ENST00000475251 AUNIPQ9H7T9 357 aa9.07□□□□□ -0.96
SKA3-206ENST00000475251 CLEC5AQ9NY25 188 aa9.07□□□□□ -0.96
SKA3-206ENST00000475251 CELA1Q9UNI1 258 aa9.07□□□□□ -0.96
SKA3-206ENST00000475251 SSR3Q9UNL2 185 aa9.07□□□□□ -0.96
SKA3-206ENST00000475251 DNAH11Q96DT5 4516 aa9.06□□□□□ -0.96
SKA3-206ENST00000475251 DBX1A6NMT0 343 aa9.06□□□□□ -0.96
SKA3-206ENST00000475251 KNCNA6PVL3 124 aa9.06□□□□□ -0.96
SKA3-206ENST00000475251 SNCAP37840 140 aa9.06□□□□□ -0.96
SKA3-206ENST00000475251 P2RY1P47900 373 aa9.06□□□□□ -0.96
SKA3-206ENST00000475251 AP2S1P53680 142 aaPredicted RBP9.06□□□□□ -0.96
SKA3-206ENST00000475251 TAS2R46P59540 309 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms