RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 DCUN1D4Q92564 292 aa12.98□□□□□ -0.33
SCAF11-206ENST00000474828 EEF1AKMT3Q96AZ1 226 aa12.98□□□□□ -0.33
SCAF11-206ENST00000474828 GPR61Q9BZJ8 451 aa12.98□□□□□ -0.33
SCAF11-206ENST00000474828 NOTCH3Q9UM47 2321 aa12.97□□□□□ -0.33
SCAF11-206ENST00000474828 G3V4G9 280 aa12.97□□□□□ -0.33
SCAF11-206ENST00000474828 IGLL1P15814 213 aa12.97□□□□□ -0.33
SCAF11-206ENST00000474828 HTR2BP41595 481 aa12.97□□□□□ -0.33
SCAF11-206ENST00000474828 SLURP1P55000 103 aa12.97□□□□□ -0.33
SCAF11-206ENST00000474828 ATP5IP56385 69 aaPredicted RBP12.97□□□□□ -0.33
SCAF11-206ENST00000474828 DEFA1P59665 94 aa12.97□□□□□ -0.33
SCAF11-206ENST00000474828 DEFA3P59666 94 aa12.97□□□□□ -0.33
SCAF11-206ENST00000474828 C2orf83Q53S99 150 aa12.97□□□□□ -0.33
SCAF11-206ENST00000474828 OXLD1Q5BKU9 147 aa12.97□□□□□ -0.33
SCAF11-206ENST00000474828 SPINK9Q5DT21 86 aa12.97□□□□□ -0.33
SCAF11-206ENST00000474828 ZNF431Q8TF32 576 aaPredicted RBP12.97□□□□□ -0.33
SCAF11-206ENST00000474828 TMEM170AQ8WVE7 144 aa12.97□□□□□ -0.33
SCAF11-206ENST00000474828 PALMDQ9NP74 551 aa12.97□□□□□ -0.33
SCAF11-206ENST00000474828 ANKRD34BA5PLL1 514 aa12.96□□□□□ -0.33
SCAF11-206ENST00000474828 CORTO00230 105 aa12.96□□□□□ -0.33
SCAF11-206ENST00000474828 OVOL1O14753 267 aa12.96□□□□□ -0.33
SCAF11-206ENST00000474828 ADAP1O75689 374 aa12.96□□□□□ -0.33
SCAF11-206ENST00000474828 HOXB5P09067 269 aa12.96□□□□□ -0.33
SCAF11-206ENST00000474828 SNCAP37840 140 aa12.96□□□□□ -0.33
SCAF11-206ENST00000474828 HOXA1P49639 335 aaPredicted RBP12.96□□□□□ -0.33
SCAF11-206ENST00000474828 INSL3P51460 131 aa12.96□□□□□ -0.33
SCAF11-206ENST00000474828 SUB1P53999 127 aaKnown RBP eCLIP12.96□□□□□ -0.33
SCAF11-206ENST00000474828 ID3Q02535 119 aa12.96□□□□□ -0.33
SCAF11-206ENST00000474828 ACSM6Q6P461 480 aa12.96□□□□□ -0.33
SCAF11-206ENST00000474828 GPHB5Q86YW7 130 aa12.96□□□□□ -0.33
SCAF11-206ENST00000474828 OR52B4Q8NGK2 314 aa12.96□□□□□ -0.33
SCAF11-206ENST00000474828 ENKURQ8TC29 256 aa12.96□□□□□ -0.33
SCAF11-206ENST00000474828 ZNF414Q96IQ9 312 aa12.96□□□□□ -0.33
SCAF11-206ENST00000474828 TXN2Q99757 166 aa12.96□□□□□ -0.33
SCAF11-206ENST00000474828 SIGLEC8Q9NYZ4 499 aa12.96□□□□□ -0.33
SCAF11-206ENST00000474828 MPTX1A8MV57 137 aa12.95□□□□□ -0.34
SCAF11-206ENST00000474828 LGALS9O00182 355 aa12.95□□□□□ -0.34
SCAF11-206ENST00000474828 GGCTO75223 188 aaKnown RBP12.95□□□□□ -0.34
SCAF11-206ENST00000474828 IL34Q6ZMJ4 242 aa12.95□□□□□ -0.34
SCAF11-206ENST00000474828 OR4D5Q8NGN0 318 aa12.95□□□□□ -0.34
SCAF11-206ENST00000474828 RBKSQ9H477 322 aa12.95□□□□□ -0.34
SCAF11-206ENST00000474828 C21orf62Q9NYP8 219 aa12.95□□□□□ -0.34
SCAF11-206ENST00000474828 U3KQ87 197 aa12.95□□□□□ -0.34
SCAF11-206ENST00000474828 PRAF2O60831 178 aa12.94□□□□□ -0.34
SCAF11-206ENST00000474828 LY86O95711 162 aa12.94□□□□□ -0.34
SCAF11-206ENST00000474828 CLEC3BP05452 202 aa12.94□□□□□ -0.34
SCAF11-206ENST00000474828 C9orf66Q5T8R8 295 aa12.94□□□□□ -0.34
SCAF11-206ENST00000474828 SPSB3Q6PJ21 355 aa12.94□□□□□ -0.34
SCAF11-206ENST00000474828 CLEC19AQ6UXS0 136 aa12.94□□□□□ -0.34
SCAF11-206ENST00000474828 REC114Q7Z4M0 266 aa12.94□□□□□ -0.34
SCAF11-206ENST00000474828 C1QL4Q86Z23 238 aa12.94□□□□□ -0.34
SCAF11-206ENST00000474828 OR1S1Q8NH92 325 aa12.94□□□□□ -0.34
SCAF11-206ENST00000474828 RNASEH2CQ8TDP1 164 aaKnown RBP12.94□□□□□ -0.34
SCAF11-206ENST00000474828 DTD1Q8TEA8 209 aa12.94□□□□□ -0.34
SCAF11-206ENST00000474828 BSCL2Q96G97 398 aaPredicted RBP12.94□□□□□ -0.34
SCAF11-206ENST00000474828 SEC22CQ9BRL7 303 aa12.94□□□□□ -0.34
SCAF11-206ENST00000474828 ENY2Q9NPA8 101 aa12.94□□□□□ -0.34
SCAF11-206ENST00000474828 HEYLQ9NQ87 328 aaPredicted RBP12.94□□□□□ -0.34
SCAF11-206ENST00000474828 CEBPZOSA8MTT3 80 aa12.93□□□□□ -0.34
SCAF11-206ENST00000474828 SNRPGP15A8MWD9 76 aa12.93□□□□□ -0.34
SCAF11-206ENST00000474828 TGOLN2O43493 480 aa12.93□□□□□ -0.34
SCAF11-206ENST00000474828 MT-CO2P00403 227 aa12.93□□□□□ -0.34
SCAF11-206ENST00000474828 IFNA21P01568 189 aa12.93□□□□□ -0.34
SCAF11-206ENST00000474828 DEFA6Q01524 100 aa12.93□□□□□ -0.34
SCAF11-206ENST00000474828 SLC24A4Q8NFF2 622 aa12.93□□□□□ -0.34
SCAF11-206ENST00000474828 OR10C1Q96KK4 312 aa12.93□□□□□ -0.34
SCAF11-206ENST00000474828 ZNF436Q9C0F3 470 aaPredicted RBP12.93□□□□□ -0.34
SCAF11-206ENST00000474828 HIPK2Q9H2X6 1198 aa12.93□□□□□ -0.34
SCAF11-206ENST00000474828 FNDC4Q9H6D8 234 aaPredicted RBP12.93□□□□□ -0.34
SCAF11-206ENST00000474828 GAR1Q9NY12 217 aaKnown RBP12.93□□□□□ -0.34
SCAF11-206ENST00000474828 A8MWP6 167 aa12.92□□□□□ -0.34
SCAF11-206ENST00000474828 SEC14L6B5MCN3 397 aa12.92□□□□□ -0.34
SCAF11-206ENST00000474828 PPP5D1E7EU14 171 aa12.92□□□□□ -0.34
SCAF11-206ENST00000474828 CTSGP08311 255 aa12.92□□□□□ -0.34
SCAF11-206ENST00000474828 ADMP35318 185 aa12.92□□□□□ -0.34
SCAF11-206ENST00000474828 ARL3P36405 182 aa12.92□□□□□ -0.34
SCAF11-206ENST00000474828 RPEL1Q2QD12 228 aa12.92□□□□□ -0.34
SCAF11-206ENST00000474828 PLET1Q6UQ28 207 aa12.92□□□□□ -0.34
SCAF11-206ENST00000474828 NOXA1Q86UR1 476 aa12.92□□□□□ -0.34
SCAF11-206ENST00000474828 C12orf45Q8N5I9 185 aaPredicted RBP12.92□□□□□ -0.34
SCAF11-206ENST00000474828 OR9G4Q8NGQ1 327 aa12.92□□□□□ -0.34
SCAF11-206ENST00000474828 S4R3C0 116 aa12.92□□□□□ -0.34
SCAF11-206ENST00000474828 INMT-MINDY4F8WBC2 141 aa12.91□□□□□ -0.34
SCAF11-206ENST00000474828 SYNGR2O43760 224 aa12.91□□□□□ -0.34
SCAF11-206ENST00000474828 MED6O75586 246 aa12.91□□□□□ -0.34
SCAF11-206ENST00000474828 PTTG1O95997 202 aa12.91□□□□□ -0.34
SCAF11-206ENST00000474828 IGHV3-23P01764 117 aa12.91□□□□□ -0.34
SCAF11-206ENST00000474828 NPY1RP25929 384 aa12.91□□□□□ -0.34
SCAF11-206ENST00000474828 GPR183P32249 361 aa12.91□□□□□ -0.34
SCAF11-206ENST00000474828 MFAP4P55083 255 aa12.91□□□□□ -0.34
SCAF11-206ENST00000474828 SYNJ2BPP57105 145 aa12.91□□□□□ -0.34
SCAF11-206ENST00000474828 IL15RAQ13261 267 aa12.91□□□□□ -0.34
SCAF11-206ENST00000474828 TATDN3Q17R31 274 aa12.91□□□□□ -0.34
SCAF11-206ENST00000474828 C11orf87Q6NUJ2 197 aa12.91□□□□□ -0.34
SCAF11-206ENST00000474828 MISP3Q96FF7 219 aa12.91□□□□□ -0.34
SCAF11-206ENST00000474828 CIB3Q96Q77 187 aaPredicted RBP12.91□□□□□ -0.34
SCAF11-206ENST00000474828 OR2C1O95371 312 aa12.9□□□□□ -0.34
SCAF11-206ENST00000474828 CSN3P07498 182 aa12.9□□□□□ -0.34
SCAF11-206ENST00000474828 ZBTB8BQ8NAP8 495 aaPredicted RBP12.9□□□□□ -0.34
SCAF11-206ENST00000474828 TMEM116Q8NCL8 245 aa12.9□□□□□ -0.34
SCAF11-206ENST00000474828 OR4X1Q8NH49 305 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms