RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 KIR2DL5BQ8NHK3 375 aa15.13■□□□□ 0.01
PDLIM4-206ENST00000474421 TERB2Q8NHR7 220 aa15.13■□□□□ 0.01
PDLIM4-206ENST00000474421 PINX1Q96BK5 328 aaKnown RBP15.13■□□□□ 0.01
PDLIM4-206ENST00000474421 PDCD10Q9BUL8 212 aa15.13■□□□□ 0.01
PDLIM4-206ENST00000474421 C6orf62Q9GZU0 229 aaPredicted RBP15.13■□□□□ 0.01
PDLIM4-206ENST00000474421 NAA50Q9GZZ1 169 aaKnown RBP15.13■□□□□ 0.01
PDLIM4-206ENST00000474421 COPZ2Q9P299 210 aa15.13■□□□□ 0.01
PDLIM4-206ENST00000474421 TRAV14DV4A0A0A6YYC5 116 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 C3orf85A0A1B0GTC6 90 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 INS-IGF2F8WCM5 200 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 CHEK1O14757 476 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 B3GALNT1O75752 331 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 SMIM18P0DKX4 95 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 PI3P19957 117 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 NPBWR1P48145 328 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 SUB1P53999 127 aaKnown RBP eCLIP15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 TAS2R19P59542 299 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 GPR107Q5VW38 600 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 STPG3Q8N7X2 389 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 SLC35G3Q8N808 338 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 TMEM229BQ8NBD8 167 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 DUSP18Q8NEJ0 188 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 TP53RKQ96S44 253 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 ABHD1Q96SE0 405 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 GINS3Q9BRX5 216 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 RHPN1-AS1Q9BWJ2 59 aa15.12■□□□□ 0.01
PDLIM4-206ENST00000474421 SPRY2O43597 315 aa15.11■□□□□ 0.01
PDLIM4-206ENST00000474421 IFNA17P01571 189 aa15.11■□□□□ 0.01
PDLIM4-206ENST00000474421 IGKV1-5P01602 117 aa15.11■□□□□ 0.01
PDLIM4-206ENST00000474421 CD5P06127 495 aa15.11■□□□□ 0.01
PDLIM4-206ENST00000474421 SSBP1Q04837 148 aaKnown RBP15.11■□□□□ 0.01
PDLIM4-206ENST00000474421 TRIM16LQ309B1 348 aa15.11■□□□□ 0.01
PDLIM4-206ENST00000474421 GALNT14Q96FL9 552 aa15.11■□□□□ 0.01
PDLIM4-206ENST00000474421 RNF2Q99496 336 aa15.11■□□□□ 0.01
PDLIM4-206ENST00000474421 A0A0B4J293 547 aa15.1■□□□□ 0.01
PDLIM4-206ENST00000474421 CORTO00230 105 aa15.1■□□□□ 0.01
PDLIM4-206ENST00000474421 CD74P04233 296 aa15.1■□□□□ 0.01
PDLIM4-206ENST00000474421 P0C879 139 aa15.1■□□□□ 0.01
PDLIM4-206ENST00000474421 PPP5CP53041 499 aa15.1■□□□□ 0.01
PDLIM4-206ENST00000474421 MRPS10P82664 201 aaKnown RBP15.1■□□□□ 0.01
PDLIM4-206ENST00000474421 RRNAD1Q96FB5 475 aaKnown RBP15.1■□□□□ 0.01
PDLIM4-206ENST00000474421 GABARAPH6UMI1 98 aa15.09■□□□□ 0.01
PDLIM4-206ENST00000474421 ST8SIA3O43173 380 aa15.09■□□□□ 0.01
PDLIM4-206ENST00000474421 RAB3DO95716 219 aa15.09■□□□□ 0.01
PDLIM4-206ENST00000474421 IGHV3-48P01763 117 aa15.09■□□□□ 0.01
PDLIM4-206ENST00000474421 PAFAH1B2P68402 229 aa15.09■□□□□ 0.01
PDLIM4-206ENST00000474421 MEF2DQ14814 521 aa15.09■□□□□ 0.01
PDLIM4-206ENST00000474421 IZUMO4Q1ZYL8 232 aa15.09■□□□□ 0.01
PDLIM4-206ENST00000474421 SCGB2B2Q4G0G5 96 aa15.09■□□□□ 0.01
PDLIM4-206ENST00000474421 SPINK9Q5DT21 86 aa15.09■□□□□ 0.01
PDLIM4-206ENST00000474421 STEAP1BQ6NZ63 245 aa15.09■□□□□ 0.01
PDLIM4-206ENST00000474421 ZNF414Q96IQ9 312 aa15.09■□□□□ 0.01
PDLIM4-206ENST00000474421 MRPS26Q9BYN8 205 aaKnown RBP15.09■□□□□ 0.01
PDLIM4-206ENST00000474421 ENY2Q9NPA8 101 aa15.09■□□□□ 0.01
PDLIM4-206ENST00000474421 RGS5O15539 181 aa15.08■□□□□ 0
PDLIM4-206ENST00000474421 UCP1P25874 307 aa15.08■□□□□ 0
PDLIM4-206ENST00000474421 TNFRSF9Q07011 255 aa15.08■□□□□ 0
PDLIM4-206ENST00000474421 DEFB135Q30KP9 77 aa15.08■□□□□ 0
PDLIM4-206ENST00000474421 GPR141Q7Z602 305 aa15.08■□□□□ 0
PDLIM4-206ENST00000474421 OR4D10Q8NGI6 311 aa15.08■□□□□ 0
PDLIM4-206ENST00000474421 OR13C8Q8NGS7 320 aa15.08■□□□□ 0
PDLIM4-206ENST00000474421 RNASE11Q8TAA1 199 aaKnown RBP15.08■□□□□ 0
PDLIM4-206ENST00000474421 SCGB2A1O75556 95 aa15.07■□□□□ 0
PDLIM4-206ENST00000474421 HOXA1P49639 335 aaPredicted RBP15.07■□□□□ 0
PDLIM4-206ENST00000474421 PVRIGQ6DKI7 326 aa15.07■□□□□ 0
PDLIM4-206ENST00000474421 TOMM20LQ6UXN7 152 aa15.07■□□□□ 0
PDLIM4-206ENST00000474421 ZNF600Q6ZNG1 722 aa15.07■□□□□ 0
PDLIM4-206ENST00000474421 RNF183Q96D59 192 aa15.07■□□□□ 0
PDLIM4-206ENST00000474421 RABL2AQ9UBK7 228 aaPredicted RBP15.07■□□□□ 0
PDLIM4-206ENST00000474421 RABL2BQ9UNT1 228 aa15.07■□□□□ 0
PDLIM4-206ENST00000474421 C14orf166Q9Y224 244 aaKnown RBP15.07■□□□□ 0
PDLIM4-206ENST00000474421 IGHV3-49A0A0A0MS15 119 aa15.06■□□□□ 0
PDLIM4-206ENST00000474421 A0A0J9YWU9 116 aa15.06■□□□□ 0
PDLIM4-206ENST00000474421 RPL35AP18077 110 aaKnown RBP15.06■□□□□ 0
PDLIM4-206ENST00000474421 ATF4P18848 351 aaPredicted RBP15.06■□□□□ 0
PDLIM4-206ENST00000474421 SP6Q3SY56 376 aa15.06■□□□□ 0
PDLIM4-206ENST00000474421 FAM90A2PQ658T7 463 aa15.06■□□□□ 0
PDLIM4-206ENST00000474421 LYG2Q86SG7 212 aa15.06■□□□□ 0
PDLIM4-206ENST00000474421 FAM219AQ8IW50 185 aa15.06■□□□□ 0
PDLIM4-206ENST00000474421 TMEM217Q8N7C4 229 aa15.06■□□□□ 0
PDLIM4-206ENST00000474421 MARCH1Q8TCQ1 289 aa15.06■□□□□ 0
PDLIM4-206ENST00000474421 MIXL1Q9H2W2 232 aa15.06■□□□□ 0
PDLIM4-206ENST00000474421 MAP6D1Q9H9H5 199 aa15.06■□□□□ 0
PDLIM4-206ENST00000474421 PLECQ15149 4684 aaKnown RBP15.05■□□□□ 0
PDLIM4-206ENST00000474421 CXorf65A6NEN9 183 aa15.05■□□□□ -0
PDLIM4-206ENST00000474421 RNASE2P10153 161 aaKnown RBP15.05■□□□□ -0
PDLIM4-206ENST00000474421 ETV6P41212 452 aa15.05■□□□□ -0
PDLIM4-206ENST00000474421 TFPI2P48307 235 aa15.05■□□□□ -0
PDLIM4-206ENST00000474421 SURF2Q15527 256 aaPredicted RBP15.05■□□□□ -0
PDLIM4-206ENST00000474421 TCF24Q7RTU0 167 aa15.05■□□□□ -0
PDLIM4-206ENST00000474421 APRG1Q8IVJ8 170 aa15.05■□□□□ -0
PDLIM4-206ENST00000474421 TMEM231Q9H6L2 316 aa15.05■□□□□ -0
PDLIM4-206ENST00000474421 PUS1Q9Y606 427 aaKnown RBP eCLIP15.05■□□□□ -0
PDLIM4-206ENST00000474421 HYDINQ4G0P3 5121 aa15.05■□□□□ -0
PDLIM4-206ENST00000474421 ALMS1Q8TCU4 4167 aa15.04■□□□□ -0
PDLIM4-206ENST00000474421 NUPR2A6NF83 97 aa15.04■□□□□ -0
PDLIM4-206ENST00000474421 DISC1C4P0D8 188 aa15.04■□□□□ -0
PDLIM4-206ENST00000474421 CDS2O95674 445 aa15.04■□□□□ -0
PDLIM4-206ENST00000474421 TMEM50AO95807 157 aa15.04■□□□□ -0
PDLIM4-206ENST00000474421 RPL5P46777 297 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms