RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 CA2P00918 260 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 IGHV4-59P01825 116 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 FABP1P07148 127 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 CRYGBP07316 175 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 NMBP08949 121 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 FAM157CP0CG43 387 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 FGF7P21781 194 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 GNB1P62873 340 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 HNF4GQ14541 408 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 LY6EQ16553 131 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 SPINK9Q5DT21 86 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 ZNF562Q6V9R5 426 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 Q6YL49 198 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 IL34Q6ZMJ4 242 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 ABHD5Q8WTS1 349 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 FBXL15Q9H469 300 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 THYN1Q9P016 225 aa10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 TET2Q6N021 2002 aaPredicted RBP10.92□□□□□ -0.66
LDLRAP1-204ENST00000474283 NIPBLQ6KC79 2804 aaeCLIP10.92□□□□□ -0.666e-6■■■□□ 16.7
LDLRAP1-204ENST00000474283 FGF16O43320 207 aa10.91□□□□□ -0.66
LDLRAP1-204ENST00000474283 HOXA3O43365 443 aaPredicted RBP10.91□□□□□ -0.66
LDLRAP1-204ENST00000474283 ATP6V1G1O75348 118 aa10.91□□□□□ -0.66
LDLRAP1-204ENST00000474283 OR13C7P0DN81 318 aa10.91□□□□□ -0.66
LDLRAP1-204ENST00000474283 IER3P46695 156 aa10.91□□□□□ -0.66
LDLRAP1-204ENST00000474283 BSXQ3C1V8 233 aa10.91□□□□□ -0.66
LDLRAP1-204ENST00000474283 TEPPQ6URK8 271 aa10.91□□□□□ -0.66
LDLRAP1-204ENST00000474283 OR1P1Q8NH06 330 aa10.91□□□□□ -0.66
LDLRAP1-204ENST00000474283 ZNF418Q8TF45 676 aaPredicted RBP10.91□□□□□ -0.66
LDLRAP1-204ENST00000474283 SRSF12Q8WXF0 261 aaKnown RBP10.91□□□□□ -0.66
LDLRAP1-204ENST00000474283 DUX5Q96PT3 197 aa10.91□□□□□ -0.66
LDLRAP1-204ENST00000474283 PBDC1Q9BVG4 233 aa10.91□□□□□ -0.66
LDLRAP1-204ENST00000474283 WFDC1Q9HC57 220 aa10.91□□□□□ -0.66
LDLRAP1-204ENST00000474283 MOB4Q9Y3A3 225 aa10.91□□□□□ -0.66
LDLRAP1-204ENST00000474283 TSPAN15O95858 294 aa10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 HLA-DRB1P01911 266 aa10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 OPN1MWP04001 364 aa10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 OPN1MW2P0DN77 364 aa10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 OPN1MW3P0DN78 364 aa10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 DEFA4P12838 97 aa10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 ZNF616Q08AN1 781 aa10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 ACOT6Q3I5F7 207 aaPredicted RBP10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 UQCC3Q6UW78 93 aa10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 BTNL8Q6UX41 500 aa10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 COMMD7Q86VX2 200 aa10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 TMEM219Q86XT9 240 aa10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 OR5R1Q8NH85 324 aa10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 SSMEM1Q8WWF3 244 aa10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 ARPC1AQ92747 370 aa10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 WDR83OSQ9Y284 106 aa10.9□□□□□ -0.66
LDLRAP1-204ENST00000474283 RAB19A4D1S5 217 aa10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 MT-CO2P00403 227 aa10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 RNASE2P10153 161 aaKnown RBP10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 OPRK1P41145 380 aa10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 FXYD3Q14802 87 aa10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 FBLN7Q53RD9 439 aa10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 TMEM41BQ5BJD5 291 aa10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 FAM74A1Q5RGS3 127 aa10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 TMEM182Q6ZP80 229 aaPredicted RBP10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 CENPVQ7Z7K6 275 aaPredicted RBP10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 S100A7AQ86SG5 101 aa10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 Q8N6K4 173 aa10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 PIFOQ8TCI5 191 aa10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 C19orf24Q9BVV8 132 aa10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 PRDM13Q9H4Q3 707 aa10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 TNCP24821 2201 aa10.89□□□□□ -0.67
LDLRAP1-204ENST00000474283 DNAJC9-AS1A6NH13 148 aa10.88□□□□□ -0.67
LDLRAP1-204ENST00000474283 PMS2P5A8MQ11 134 aa10.88□□□□□ -0.67
LDLRAP1-204ENST00000474283 HIST1H1BP16401 226 aaKnown RBP10.88□□□□□ -0.67
LDLRAP1-204ENST00000474283 TAGLN2P37802 199 aaKnown RBP10.88□□□□□ -0.67
LDLRAP1-204ENST00000474283 SELENOTP62341 195 aa10.88□□□□□ -0.67
LDLRAP1-204ENST00000474283 CD69Q07108 199 aa10.88□□□□□ -0.67
LDLRAP1-204ENST00000474283 TUSC1Q2TAM9 212 aa10.88□□□□□ -0.67
LDLRAP1-204ENST00000474283 Q6ZRG5 221 aa10.88□□□□□ -0.67
LDLRAP1-204ENST00000474283 TMEM144Q7Z5S9 345 aa10.88□□□□□ -0.67
LDLRAP1-204ENST00000474283 FAM213BQ8TBF2 198 aa10.88□□□□□ -0.67
LDLRAP1-204ENST00000474283 MARC2Q969Z3 335 aa10.88□□□□□ -0.67
LDLRAP1-204ENST00000474283 RITA1Q96K30 269 aa10.88□□□□□ -0.67
LDLRAP1-204ENST00000474283 NPCDR1Q9BY65 106 aa10.88□□□□□ -0.67
LDLRAP1-204ENST00000474283 F11RQ9Y624 299 aaKnown RBP10.88□□□□□ -0.67
LDLRAP1-204ENST00000474283 IGLC7A0M8Q6 106 aa10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 A6NDX4 124 aa10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 IFNA1P01562 189 aa10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 H2AFB1P0C5Y9 115 aa10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 CNTFRP26992 372 aa10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 S100A7P31151 101 aa10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 SLC16A13Q7RTY0 426 aa10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 HAPLN4Q86UW8 402 aa10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 EIF4E3Q8N5X7 224 aaKnown RBP10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 BSCL2Q96G97 398 aaPredicted RBP10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 RBM14Q96PK6 669 aaKnown RBP10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 RNF2Q99496 336 aa10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 SLC25A33Q9BSK2 321 aa10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 ACTR3CQ9C0K3 210 aaPredicted RBP10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 SMDT1Q9H4I9 107 aa10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 GAR1Q9NY12 217 aaKnown RBP10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 VPREB3Q9UKI3 123 aa10.87□□□□□ -0.67
LDLRAP1-204ENST00000474283 A0A1W2PPV4 95 aa10.86□□□□□ -0.67
LDLRAP1-204ENST00000474283 NPIPB5A8MRT5 1133 aa10.86□□□□□ -0.67
LDLRAP1-204ENST00000474283 PPT1P50897 306 aa10.86□□□□□ -0.67
LDLRAP1-204ENST00000474283 WT1-ASQ06250 92 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms