RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 ALMS1Q8TCU4 4167 aa12.22□□□□□ -0.45
CPA4-205ENST00000474254 A0A0B4J293 547 aa12.21□□□□□ -0.45
CPA4-205ENST00000474254 I3L2K1 104 aa12.21□□□□□ -0.45
CPA4-205ENST00000474254 NDUFA4O00483 81 aa12.21□□□□□ -0.45
CPA4-205ENST00000474254 ADMP35318 185 aa12.21□□□□□ -0.45
CPA4-205ENST00000474254 SP6Q3SY56 376 aa12.21□□□□□ -0.45
CPA4-205ENST00000474254 LINC00322Q6ZN03 302 aaPredicted RBP12.21□□□□□ -0.45
CPA4-205ENST00000474254 UBAC2Q8NBM4 344 aa12.21□□□□□ -0.45
CPA4-205ENST00000474254 MISP3Q96FF7 219 aa12.21□□□□□ -0.45
CPA4-205ENST00000474254 NXF2Q9GZY0 626 aaKnown RBP12.21□□□□□ -0.45
CPA4-205ENST00000474254 DAZ1Q9NQZ3 744 aaKnown RBP12.21□□□□□ -0.45
CPA4-205ENST00000474254 RSL24D1Q9UHA3 163 aaKnown RBP12.21□□□□□ -0.45
CPA4-205ENST00000474254 C14orf166Q9Y224 244 aaKnown RBP12.21□□□□□ -0.45
CPA4-205ENST00000474254 TRAV25A0A0B4J276 109 aa12.2□□□□□ -0.46
CPA4-205ENST00000474254 ANKRD20A5PA0PJZ0 165 aa12.2□□□□□ -0.46
CPA4-205ENST00000474254 INS-IGF2F8WCM5 200 aa12.2□□□□□ -0.46
CPA4-205ENST00000474254 ST8SIA3O43173 380 aa12.2□□□□□ -0.46
CPA4-205ENST00000474254 FCGR2BP31994 310 aaPredicted RBP12.2□□□□□ -0.46
CPA4-205ENST00000474254 ERHP84090 104 aaKnown RBP12.2□□□□□ -0.46
CPA4-205ENST00000474254 Q56UQ5 140 aa12.2□□□□□ -0.46
CPA4-205ENST00000474254 SLC16A13Q7RTY0 426 aa12.2□□□□□ -0.46
CPA4-205ENST00000474254 DEFB125Q8N687 156 aa12.2□□□□□ -0.46
CPA4-205ENST00000474254 SLC35G3Q8N808 338 aa12.2□□□□□ -0.46
CPA4-205ENST00000474254 MCFD2Q8NI22 146 aa12.2□□□□□ -0.46
CPA4-205ENST00000474254 PRRT1Q99946 306 aa12.2□□□□□ -0.46
CPA4-205ENST00000474254 FAM110AQ9BQ89 295 aa12.2□□□□□ -0.46
CPA4-205ENST00000474254 SOSTQ9BQB4 213 aa12.2□□□□□ -0.46
CPA4-205ENST00000474254 RTBDNQ9BSG5 229 aaPredicted RBP12.2□□□□□ -0.46
CPA4-205ENST00000474254 TMEM222Q9H0R3 208 aa12.2□□□□□ -0.46
CPA4-205ENST00000474254 C5orf66Q9H5L9 145 aa12.2□□□□□ -0.46
CPA4-205ENST00000474254 NAA60Q9H7X0 242 aa12.2□□□□□ -0.46
CPA4-205ENST00000474254 A0A0G2JRQ6 117 aa12.19□□□□□ -0.46
CPA4-205ENST00000474254 OR11H12B2RN74 326 aa12.19□□□□□ -0.46
CPA4-205ENST00000474254 SCAF4O95104 1147 aaKnown RBP12.19□□□□□ -0.46
CPA4-205ENST00000474254 MT-CO2P00403 227 aa12.19□□□□□ -0.46
CPA4-205ENST00000474254 CTSGP08311 255 aa12.19□□□□□ -0.46
CPA4-205ENST00000474254 OR5AC1P0C628 307 aa12.19□□□□□ -0.46
CPA4-205ENST00000474254 TNFSF8P32971 234 aa12.19□□□□□ -0.46
CPA4-205ENST00000474254 SPINK9Q5DT21 86 aa12.19□□□□□ -0.46
CPA4-205ENST00000474254 OR51S1Q8NGJ8 323 aa12.19□□□□□ -0.46
CPA4-205ENST00000474254 LHFPL5Q8TAF8 219 aa12.19□□□□□ -0.46
CPA4-205ENST00000474254 RRNAD1Q96FB5 475 aaKnown RBP12.19□□□□□ -0.46
CPA4-205ENST00000474254 ZNF414Q96IQ9 312 aa12.19□□□□□ -0.46
CPA4-205ENST00000474254 HIPK2Q9H2X6 1198 aa12.19□□□□□ -0.46
CPA4-205ENST00000474254 SRD5A3Q9H8P0 318 aa12.19□□□□□ -0.46
CPA4-205ENST00000474254 CRYM-AS1A6NIL9 109 aa12.18□□□□□ -0.46
CPA4-205ENST00000474254 CDS2O95674 445 aa12.18□□□□□ -0.46
CPA4-205ENST00000474254 IFNA17P01571 189 aa12.18□□□□□ -0.46
CPA4-205ENST00000474254 MFAP4P55083 255 aa12.18□□□□□ -0.46
CPA4-205ENST00000474254 AARDQ4LEZ3 155 aa12.18□□□□□ -0.46
CPA4-205ENST00000474254 FAM219AQ8IW50 185 aa12.18□□□□□ -0.46
CPA4-205ENST00000474254 OR52B4Q8NGK2 314 aa12.18□□□□□ -0.46
CPA4-205ENST00000474254 RNASE11Q8TAA1 199 aaKnown RBP12.18□□□□□ -0.46
CPA4-205ENST00000474254 GLYATL2Q8WU03 294 aa12.18□□□□□ -0.46
CPA4-205ENST00000474254 TXN2Q99757 166 aa12.18□□□□□ -0.46
CPA4-205ENST00000474254 PDCD10Q9BUL8 212 aa12.18□□□□□ -0.46
CPA4-205ENST00000474254 GPR132Q9UNW8 380 aa12.18□□□□□ -0.46
CPA4-205ENST00000474254 TEX13DA0A0J9YY54 714 aaPredicted RBP12.17□□□□□ -0.46
CPA4-205ENST00000474254 RBMY1BA6NDE4 496 aaKnown RBP12.17□□□□□ -0.46
CPA4-205ENST00000474254 RBMY1EA6NEQ0 496 aaKnown RBP12.17□□□□□ -0.46
CPA4-205ENST00000474254 FABP12A6NFH5 140 aa12.17□□□□□ -0.46
CPA4-205ENST00000474254 C15orf62A8K5M9 175 aa12.17□□□□□ -0.46
CPA4-205ENST00000474254 K7EMT4 169 aa12.17□□□□□ -0.46
CPA4-205ENST00000474254 NUPL2O15504 423 aaKnown RBP12.17□□□□□ -0.46
CPA4-205ENST00000474254 RBMY1DP0C7P1 496 aaKnown RBP12.17□□□□□ -0.46
CPA4-205ENST00000474254 RELQ04864 619 aaPredicted RBP12.17□□□□□ -0.46
CPA4-205ENST00000474254 ANKRD55Q3KP44 614 aa12.17□□□□□ -0.46
CPA4-205ENST00000474254 PVRIGQ6DKI7 326 aa12.17□□□□□ -0.46
CPA4-205ENST00000474254 RBPMS2Q6ZRY4 209 aaKnown RBP12.17□□□□□ -0.46
CPA4-205ENST00000474254 RBPMSQ93062 196 aaKnown RBP12.17□□□□□ -0.46
CPA4-205ENST00000474254 PINX1Q96BK5 328 aaKnown RBP12.17□□□□□ -0.46
CPA4-205ENST00000474254 C20orf24Q9BUV8 137 aa12.17□□□□□ -0.46
CPA4-205ENST00000474254 IGHV3OR16-8A0A075B7F1 116 aa12.16□□□□□ -0.46
CPA4-205ENST00000474254 IGHV3-48P01763 117 aa12.16□□□□□ -0.46
CPA4-205ENST00000474254 RNASE2P10153 161 aaKnown RBP12.16□□□□□ -0.46
CPA4-205ENST00000474254 SNCAP37840 140 aa12.16□□□□□ -0.46
CPA4-205ENST00000474254 HOXA1P49639 335 aaPredicted RBP12.16□□□□□ -0.46
CPA4-205ENST00000474254 DHODHQ02127 395 aa12.16□□□□□ -0.46
CPA4-205ENST00000474254 Q6ZRM9 215 aa12.16□□□□□ -0.46
CPA4-205ENST00000474254 OR10C1Q96KK4 312 aa12.16□□□□□ -0.46
CPA4-205ENST00000474254 SPAG8Q99932 426 aaPredicted RBP12.16□□□□□ -0.46
CPA4-205ENST00000474254 RBM38Q9H0Z9 239 aaKnown RBP12.16□□□□□ -0.46
CPA4-205ENST00000474254 SCP2D1Q9UJQ7 156 aa12.16□□□□□ -0.46
CPA4-205ENST00000474254 CORTO00230 105 aa12.15□□□□□ -0.46
CPA4-205ENST00000474254 TSPAN4O14817 238 aa12.15□□□□□ -0.46
CPA4-205ENST00000474254 ZNF207O43670 478 aaKnown RBP12.15□□□□□ -0.46
CPA4-205ENST00000474254 GNG7O60262 68 aa12.15□□□□□ -0.46
CPA4-205ENST00000474254 ETV6P41212 452 aa12.15□□□□□ -0.46
CPA4-205ENST00000474254 SELENOHQ8IZQ5 122 aaKnown RBP12.15□□□□□ -0.46
CPA4-205ENST00000474254 TRIM63Q969Q1 353 aa12.15□□□□□ -0.46
CPA4-205ENST00000474254 TMEM230Q96A57 120 aa12.15□□□□□ -0.46
CPA4-205ENST00000474254 CCDC160A6NGH7 325 aa12.14□□□□□ -0.47
CPA4-205ENST00000474254 SUB1P53999 127 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPA4-205ENST00000474254 SPCS3P61009 180 aa12.14□□□□□ -0.47
CPA4-205ENST00000474254 BSXQ3C1V8 233 aa12.14□□□□□ -0.47
CPA4-205ENST00000474254 TMEM268Q5VZI3 342 aa12.14□□□□□ -0.47
CPA4-205ENST00000474254 OR52E5Q8NH55 327 aa12.14□□□□□ -0.47
CPA4-205ENST00000474254 GALNT14Q96FL9 552 aa12.14□□□□□ -0.47
CPA4-205ENST00000474254 ENY2Q9NPA8 101 aa12.14□□□□□ -0.47
CPA4-205ENST00000474254 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms