RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 GAR1Q9NY12 217 aaKnown RBP8.42□□□□□ -1.06
CKS1B-206ENST00000474215 GPR132Q9UNW8 380 aa8.42□□□□□ -1.06
CKS1B-206ENST00000474215 STAB2Q8WWQ8 2551 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 TRAV25A0A0B4J276 109 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 CCDC160A6NGH7 325 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 INS-IGF2F8WCM5 200 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 NDUFA4O00483 81 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 ST8SIA3O43173 380 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 OR5AC1P0C628 307 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 ETV6P41212 452 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 DHODHQ02127 395 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 SPINK9Q5DT21 86 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 BTNL8Q6UX41 500 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 LINC00322Q6ZN03 302 aaPredicted RBP8.41□□□□□ -1.06
CKS1B-206ENST00000474215 SLC35G3Q8N808 338 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 RNASE11Q8TAA1 199 aaKnown RBP8.41□□□□□ -1.06
CKS1B-206ENST00000474215 TMEM190Q8WZ59 177 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 TXN2Q99757 166 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 PDCD10Q9BUL8 212 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 C5orf66Q9H5L9 145 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 NAA60Q9H7X0 242 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 DAZ1Q9NQZ3 744 aaKnown RBP8.41□□□□□ -1.06
CKS1B-206ENST00000474215 SCP2D1Q9UJQ7 156 aa8.41□□□□□ -1.06
CKS1B-206ENST00000474215 A0A0G2JRQ6 117 aa8.4□□□□□ -1.06
CKS1B-206ENST00000474215 CRYM-AS1A6NIL9 109 aa8.4□□□□□ -1.06
CKS1B-206ENST00000474215 OR11H12B2RN74 326 aa8.4□□□□□ -1.06
CKS1B-206ENST00000474215 K7EMT4 169 aa8.4□□□□□ -1.06
CKS1B-206ENST00000474215 NUPL2O15504 423 aaKnown RBP8.4□□□□□ -1.06
CKS1B-206ENST00000474215 SCAF4O95104 1147 aaKnown RBP8.4□□□□□ -1.06
CKS1B-206ENST00000474215 MT-CO2P00403 227 aa8.4□□□□□ -1.06
CKS1B-206ENST00000474215 FCGR2BP31994 310 aaPredicted RBP8.4□□□□□ -1.06
CKS1B-206ENST00000474215 SUB1P53999 127 aaKnown RBP eCLIP8.4□□□□□ -1.062e-57■■■■■ 200.7
CKS1B-206ENST00000474215 ANKRD55Q3KP44 614 aa8.4□□□□□ -1.06
CKS1B-206ENST00000474215 Q6ZRM9 215 aa8.4□□□□□ -1.06
CKS1B-206ENST00000474215 RBPMS2Q6ZRY4 209 aaKnown RBP8.4□□□□□ -1.06
CKS1B-206ENST00000474215 SLC16A13Q7RTY0 426 aa8.4□□□□□ -1.06
CKS1B-206ENST00000474215 FAM219AQ8IW50 185 aa8.4□□□□□ -1.06
CKS1B-206ENST00000474215 DEFB125Q8N687 156 aa8.4□□□□□ -1.06
CKS1B-206ENST00000474215 RBPMSQ93062 196 aaKnown RBP8.4□□□□□ -1.06
CKS1B-206ENST00000474215 PINX1Q96BK5 328 aaKnown RBP8.4□□□□□ -1.06
CKS1B-206ENST00000474215 SCGB3A2Q96PL1 93 aa8.4□□□□□ -1.06
CKS1B-206ENST00000474215 C20orf24Q9BUV8 137 aa8.4□□□□□ -1.06
CKS1B-206ENST00000474215 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.4□□□□□ -1.06
CKS1B-206ENST00000474215 KCNIP3Q9Y2W7 256 aa8.4□□□□□ -1.06
CKS1B-206ENST00000474215 NBEAL2Q6ZNJ1 2754 aa8.39□□□□□ -1.07
CKS1B-206ENST00000474215 C15orf62A8K5M9 175 aa8.39□□□□□ -1.07
CKS1B-206ENST00000474215 IGHV3-48P01763 117 aa8.39□□□□□ -1.07
CKS1B-206ENST00000474215 RELQ04864 619 aaPredicted RBP8.39□□□□□ -1.07
CKS1B-206ENST00000474215 AARDQ4LEZ3 155 aa8.39□□□□□ -1.07
CKS1B-206ENST00000474215 PYDC2Q56P42 97 aa8.39□□□□□ -1.07
CKS1B-206ENST00000474215 SELENOHQ8IZQ5 122 aaKnown RBP8.39□□□□□ -1.07
CKS1B-206ENST00000474215 OR52B4Q8NGK2 314 aa8.39□□□□□ -1.07
CKS1B-206ENST00000474215 LHFPL5Q8TAF8 219 aa8.39□□□□□ -1.07
CKS1B-206ENST00000474215 SPATA25Q9BR10 227 aa8.39□□□□□ -1.07
CKS1B-206ENST00000474215 ENY2Q9NPA8 101 aa8.39□□□□□ -1.07
CKS1B-206ENST00000474215 MCUBQ9NWR8 336 aa8.39□□□□□ -1.07
CKS1B-206ENST00000474215 TMEM56-RWDD3S4R434 201 aa8.39□□□□□ -1.07
CKS1B-206ENST00000474215 IGHV3OR16-8A0A075B7F1 116 aa8.38□□□□□ -1.07
CKS1B-206ENST00000474215 C3orf84H3BNL1 204 aa8.38□□□□□ -1.07
CKS1B-206ENST00000474215 GNG7O60262 68 aa8.38□□□□□ -1.07
CKS1B-206ENST00000474215 YIF1AO95070 293 aa8.38□□□□□ -1.07
CKS1B-206ENST00000474215 RNASE2P10153 161 aaKnown RBP8.38□□□□□ -1.07
CKS1B-206ENST00000474215 S100A5P33763 92 aa8.38□□□□□ -1.07
CKS1B-206ENST00000474215 NPBWR1P48145 328 aa8.38□□□□□ -1.07
CKS1B-206ENST00000474215 HOXA1P49639 335 aaPredicted RBP8.38□□□□□ -1.07
CKS1B-206ENST00000474215 SPCS3P61009 180 aa8.38□□□□□ -1.07
CKS1B-206ENST00000474215 TMEM268Q5VZI3 342 aa8.38□□□□□ -1.07
CKS1B-206ENST00000474215 PVRIGQ6DKI7 326 aa8.38□□□□□ -1.07
CKS1B-206ENST00000474215 DUSP18Q8NEJ0 188 aa8.38□□□□□ -1.07
CKS1B-206ENST00000474215 OR52E5Q8NH55 327 aa8.38□□□□□ -1.07
CKS1B-206ENST00000474215 CITED4Q96RK1 184 aa8.38□□□□□ -1.07
CKS1B-206ENST00000474215 SPAG8Q99932 426 aaPredicted RBP8.38□□□□□ -1.07
CKS1B-206ENST00000474215 RBM38Q9H0Z9 239 aaKnown RBP8.38□□□□□ -1.07
CKS1B-206ENST00000474215 WFDC10AQ9H1F0 79 aa8.38□□□□□ -1.07
CKS1B-206ENST00000474215 SRD5A3Q9H8P0 318 aa8.38□□□□□ -1.07
CKS1B-206ENST00000474215 SMPXQ9UHP9 88 aa8.38□□□□□ -1.07
CKS1B-206ENST00000474215 RBMY1BA6NDE4 496 aaKnown RBP8.37□□□□□ -1.07
CKS1B-206ENST00000474215 RBMY1EA6NEQ0 496 aaKnown RBP8.37□□□□□ -1.07
CKS1B-206ENST00000474215 ZNF701M0R085 212 aaPredicted RBP8.37□□□□□ -1.07
CKS1B-206ENST00000474215 CORTO00230 105 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 TSPAN4O14817 238 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 ZNF207O43670 478 aaKnown RBP8.37□□□□□ -1.07
CKS1B-206ENST00000474215 RBMY1DP0C7P1 496 aaKnown RBP8.37□□□□□ -1.07
CKS1B-206ENST00000474215 AKR1C4P17516 323 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 FAUP35544 74 aaKnown RBP8.37□□□□□ -1.07
CKS1B-206ENST00000474215 AP3S2P59780 193 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 KLF9Q13886 244 aaPredicted RBP8.37□□□□□ -1.07
CKS1B-206ENST00000474215 TMEM187Q14656 261 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 BSXQ3C1V8 233 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 LAMTOR1Q6IAA8 161 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 MUC7Q8TAX7 377 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 IL22RA2Q969J5 263 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 TMEM230Q96A57 120 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 GPR146Q96CH1 333 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 GALNT14Q96FL9 552 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 ZNF414Q96IQ9 312 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 OR10C1Q96KK4 312 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 CACNG5Q9UF02 275 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 V9GYH0 126 aa8.37□□□□□ -1.07
CKS1B-206ENST00000474215 TRAV14DV4A0A0A6YYC5 116 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms