RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 DNAH3Q8TD57 4116 aa14.3□□□□□ -0.12
CCDC171-206ENST00000474193 CEBPZOSA8MTT3 80 aa14.29□□□□□ -0.12
CCDC171-206ENST00000474193 ADAP1O75689 374 aa14.29□□□□□ -0.12
CCDC171-206ENST00000474193 AREGP15514 252 aa14.29□□□□□ -0.12
CCDC171-206ENST00000474193 KLF5Q13887 457 aaPredicted RBP14.29□□□□□ -0.12
CCDC171-206ENST00000474193 OR10W1Q8NGF6 305 aa14.29□□□□□ -0.12
CCDC171-206ENST00000474193 PEMTQ9UBM1 199 aa14.29□□□□□ -0.12
CCDC171-206ENST00000474193 A0A1B0GW64 132 aa14.28□□□□□ -0.12
CCDC171-206ENST00000474193 IGLC7A0M8Q6 106 aa14.28□□□□□ -0.12
CCDC171-206ENST00000474193 CGB1A6NKQ9 187 aa14.28□□□□□ -0.12
CCDC171-206ENST00000474193 FAM25EA8MYX2 175 aa14.28□□□□□ -0.12
CCDC171-206ENST00000474193 REG1AP05451 166 aa14.28□□□□□ -0.12
CCDC171-206ENST00000474193 GP9P14770 177 aa14.28□□□□□ -0.12
CCDC171-206ENST00000474193 HIST1H1BP16401 226 aaKnown RBP14.28□□□□□ -0.12
CCDC171-206ENST00000474193 SNCAP37840 140 aa14.28□□□□□ -0.12
CCDC171-206ENST00000474193 EXOSC2Q13868 293 aaKnown RBP14.28□□□□□ -0.12
CCDC171-206ENST00000474193 SPINK9Q5DT21 86 aa14.28□□□□□ -0.12
CCDC171-206ENST00000474193 OR9G4Q8NGQ1 327 aa14.28□□□□□ -0.12
CCDC171-206ENST00000474193 OR1L6Q8NGR2 347 aa14.28□□□□□ -0.12
CCDC171-206ENST00000474193 C5orf51A6NDU8 294 aa14.27□□□□□ -0.13
CCDC171-206ENST00000474193 SSNA1O43805 119 aa14.27□□□□□ -0.13
CCDC171-206ENST00000474193 NXPH3O95157 252 aa14.27□□□□□ -0.13
CCDC171-206ENST00000474193 PRH1P02810 166 aa14.27□□□□□ -0.13
CCDC171-206ENST00000474193 CRYGCP07315 174 aa14.27□□□□□ -0.13
CCDC171-206ENST00000474193 SUB1P53999 127 aaKnown RBP eCLIP14.27□□□□□ -0.13
CCDC171-206ENST00000474193 SYNJ2BPP57105 145 aa14.27□□□□□ -0.13
CCDC171-206ENST00000474193 AARDQ4LEZ3 155 aa14.27□□□□□ -0.13
CCDC171-206ENST00000474193 HIPK2Q9H2X6 1198 aa14.27□□□□□ -0.13
CCDC171-206ENST00000474193 HEYLQ9NQ87 328 aaPredicted RBP14.27□□□□□ -0.13
CCDC171-206ENST00000474193 THYN1Q9P016 225 aa14.27□□□□□ -0.13
CCDC171-206ENST00000474193 TRBV9A0A0B4J1U6 114 aa14.26□□□□□ -0.13
CCDC171-206ENST00000474193 MED6O75586 246 aa14.26□□□□□ -0.13
CCDC171-206ENST00000474193 OR2J3O76001 311 aa14.26□□□□□ -0.13
CCDC171-206ENST00000474193 CTRB1P17538 263 aa14.26□□□□□ -0.13
CCDC171-206ENST00000474193 DEFA5Q01523 94 aa14.26□□□□□ -0.13
CCDC171-206ENST00000474193 WT1-ASQ06250 92 aa14.26□□□□□ -0.13
CCDC171-206ENST00000474193 TNFRSF9Q07011 255 aa14.26□□□□□ -0.13
CCDC171-206ENST00000474193 IAH1Q2TAA2 248 aaPredicted RBP14.26□□□□□ -0.13
CCDC171-206ENST00000474193 CTRB2Q6GPI1 263 aa14.26□□□□□ -0.13
CCDC171-206ENST00000474193 GSKIPQ9P0R6 139 aa14.26□□□□□ -0.13
CCDC171-206ENST00000474193 FBXL7Q9UJT9 491 aa14.26□□□□□ -0.13
CCDC171-206ENST00000474193 FAM90A26D6RGX4 464 aa14.25□□□□□ -0.13
CCDC171-206ENST00000474193 WRBO00258 174 aa14.25□□□□□ -0.13
CCDC171-206ENST00000474193 C15orf32Q32M92 178 aa14.25□□□□□ -0.13
CCDC171-206ENST00000474193 SLC25A24Q6NUK1 477 aa14.25□□□□□ -0.13
CCDC171-206ENST00000474193 GSG1LQ6UXU4 331 aa14.25□□□□□ -0.13
CCDC171-206ENST00000474193 OR2C3Q8N628 320 aa14.25□□□□□ -0.13
CCDC171-206ENST00000474193 HSPB7Q9UBY9 170 aa14.25□□□□□ -0.13
CCDC171-206ENST00000474193 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.24□□□□□ -0.13
CCDC171-206ENST00000474193 IGLV1-51P01701 117 aa14.24□□□□□ -0.13
CCDC171-206ENST00000474193 OXA1LQ15070 435 aa14.24□□□□□ -0.13
CCDC171-206ENST00000474193 C11orf87Q6NUJ2 197 aa14.24□□□□□ -0.13
CCDC171-206ENST00000474193 F11RQ9Y624 299 aaKnown RBP14.24□□□□□ -0.13
CCDC171-206ENST00000474193 MPTX1A8MV57 137 aa14.23□□□□□ -0.13
CCDC171-206ENST00000474193 INS-IGF2F8WCM5 200 aa14.23□□□□□ -0.13
CCDC171-206ENST00000474193 CCSO14618 274 aa14.23□□□□□ -0.13
CCDC171-206ENST00000474193 GGCTO75223 188 aaKnown RBP14.23□□□□□ -0.13
CCDC171-206ENST00000474193 PITX3O75364 302 aa14.23□□□□□ -0.13
CCDC171-206ENST00000474193 NKX2-1P43699 371 aaPredicted RBP14.23□□□□□ -0.13
CCDC171-206ENST00000474193 NOXA1Q86UR1 476 aa14.23□□□□□ -0.13
CCDC171-206ENST00000474193 OR1P1Q8NH06 330 aa14.23□□□□□ -0.13
CCDC171-206ENST00000474193 DTD1Q8TEA8 209 aa14.23□□□□□ -0.13
CCDC171-206ENST00000474193 EEF1AKMT3Q96AZ1 226 aa14.23□□□□□ -0.13
CCDC171-206ENST00000474193 OR10C1Q96KK4 312 aa14.23□□□□□ -0.13
CCDC171-206ENST00000474193 RBKSQ9H477 322 aa14.23□□□□□ -0.13
CCDC171-206ENST00000474193 U3KQK5 164 aa14.23□□□□□ -0.13
CCDC171-206ENST00000474193 GOSR2O14653 212 aa14.22□□□□□ -0.13
CCDC171-206ENST00000474193 SCGB1D2O95969 90 aa14.22□□□□□ -0.13
CCDC171-206ENST00000474193 TRBV12-3P01733 135 aa14.22□□□□□ -0.13
CCDC171-206ENST00000474193 HTR2BP41595 481 aa14.22□□□□□ -0.13
CCDC171-206ENST00000474193 LCN12Q6JVE5 192 aa14.22□□□□□ -0.13
CCDC171-206ENST00000474193 ZBTB8BQ8NAP8 495 aaPredicted RBP14.22□□□□□ -0.13
CCDC171-206ENST00000474193 ZNF114Q8NC26 417 aa14.22□□□□□ -0.13
CCDC171-206ENST00000474193 CXorf58Q96LI9 332 aa14.22□□□□□ -0.13
CCDC171-206ENST00000474193 WWC2-AS2Q96NR7 200 aa14.22□□□□□ -0.13
CCDC171-206ENST00000474193 CIB3Q96Q77 187 aaPredicted RBP14.22□□□□□ -0.13
CCDC171-206ENST00000474193 SIGLEC8Q9NYZ4 499 aa14.22□□□□□ -0.13
CCDC171-206ENST00000474193 ALG5Q9Y673 324 aa14.22□□□□□ -0.13
CCDC171-206ENST00000474193 C7orf66A4D0T2 115 aa14.21□□□□□ -0.13
CCDC171-206ENST00000474193 SYNGR2O43760 224 aa14.21□□□□□ -0.13
CCDC171-206ENST00000474193 IFNA10P01566 189 aa14.21□□□□□ -0.13
CCDC171-206ENST00000474193 RPP30P78346 268 aaKnown RBP14.21□□□□□ -0.13
CCDC171-206ENST00000474193 FAM106AQ4KMX7 169 aa14.21□□□□□ -0.13
CCDC171-206ENST00000474193 C19orf35Q6ZS72 473 aa14.21□□□□□ -0.13
CCDC171-206ENST00000474193 C2orf50Q96LR7 162 aa14.21□□□□□ -0.13
CCDC171-206ENST00000474193 ASCL2Q99929 193 aa14.21□□□□□ -0.13
CCDC171-206ENST00000474193 U3KQ87 197 aa14.21□□□□□ -0.13
CCDC171-206ENST00000474193 IGLV11-55A0A075B6I3 123 aa14.2□□□□□ -0.14
CCDC171-206ENST00000474193 TRBV7-1A0A0A6YYK4 115 aa14.2□□□□□ -0.14
CCDC171-206ENST00000474193 CORTO00230 105 aa14.2□□□□□ -0.14
CCDC171-206ENST00000474193 BMPR1BO00238 502 aa14.2□□□□□ -0.14
CCDC171-206ENST00000474193 GTSCR1Q86UQ5 136 aa14.2□□□□□ -0.14
CCDC171-206ENST00000474193 OR4D5Q8NGN0 318 aa14.2□□□□□ -0.14
CCDC171-206ENST00000474193 MISP3Q96FF7 219 aa14.2□□□□□ -0.14
CCDC171-206ENST00000474193 FANCD2OSQ96PS1 177 aa14.2□□□□□ -0.14
CCDC171-206ENST00000474193 MAGT1Q9H0U3 335 aa14.2□□□□□ -0.14
CCDC171-206ENST00000474193 NDUFB8O95169 186 aa14.19□□□□□ -0.14
CCDC171-206ENST00000474193 CSN3P07498 182 aa14.19□□□□□ -0.14
CCDC171-206ENST00000474193 ARL3P36405 182 aa14.19□□□□□ -0.14
CCDC171-206ENST00000474193 ATP5IP56385 69 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms