RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 MYLKQ15746 1914 aa2.7□□□□□ -1.98
BRCA1-212ENST00000473961 COL4A1P02462 1669 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 LOC285556D6RIA3 1793 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 TRBV24-1A0A075B6N3 115 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 IGKV2D-24A0A075B6R9 120 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 TLCD2A6NGC4 264 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 OR51F1A6NGY5 319 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 F5H5T6 163 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 F6UZH7 168 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 K7EPK0 472 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 K7ERU9 68 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 UPK2O00526 184 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 COCHO43405 550 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 NDUFS5O43920 106 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 MAS1P04201 325 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 CXCL1P09341 107 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 SEC11BP0C7V7 166 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 PET100P0DJ07 73 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 GTF2F2P13984 249 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 CDK2P24941 298 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 P2RY2P41231 377 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 PRLHRP49683 370 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 PPP1CAP62136 330 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 HIST1H3AP68431 136 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 ZNF791Q3KP31 576 aaPredicted RBP2.69□□□□□ -1.98
BRCA1-212ENST00000473961 MORN2Q502X0 79 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 RNASE13Q5GAN3 156 aaKnown RBP2.69□□□□□ -1.98
BRCA1-212ENST00000473961 PRSS54Q6PEW0 395 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 SBSNQ6UWP8 590 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 Q6ZVH6 145 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 SMIM5Q71RC9 77 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 TCF24Q7RTU0 167 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 COMMD6Q7Z4G1 85 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 SLC35E3Q7Z769 313 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 TMED4Q7Z7H5 227 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 LYG2Q86SG7 212 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 GKN2Q86XP6 184 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 CLECL1Q8IZS7 167 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 ZDHHC22Q8N966 263 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 CD200R1Q8TD46 325 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 CASTOR1Q8WTX7 329 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 MAL2Q969L2 176 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 TVP23CQ96ET8 276 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 IMMP2LQ96T52 175 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 CDX2Q99626 313 aaPredicted RBP2.69□□□□□ -1.98
BRCA1-212ENST00000473961 MED10Q9BTT4 135 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 NUDT9Q9BW91 350 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 MS4A8Q9BY19 250 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 MRPL20Q9BYC9 149 aaKnown RBP2.69□□□□□ -1.98
BRCA1-212ENST00000473961 EIF5A2Q9GZV4 153 aaKnown RBP2.69□□□□□ -1.98
BRCA1-212ENST00000473961 CHST6Q9GZX3 395 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 CHRNA10Q9GZZ6 450 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 OR2S2Q9NQN1 319 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 SLC23A2Q9UGH3 650 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 PRO0628Q9UI54 55 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 ZNF230Q9UIE0 474 aaPredicted RBP2.69□□□□□ -1.98
BRCA1-212ENST00000473961 NAGKQ9UJ70 344 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 ANXA10Q9UJ72 324 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 NOP16Q9Y3C1 178 aaKnown RBP2.69□□□□□ -1.98
BRCA1-212ENST00000473961 ZSWIM8A7E2V4 1837 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 ZNF236Q9UL36 1845 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 LRP4O75096 1905 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 ROBO1Q9Y6N7 1651 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 ANK1P16157 1881 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 SHROOM3Q8TF72 1996 aa2.69□□□□□ -1.98
BRCA1-212ENST00000473961 COL11A1P12107 1806 aaPredicted RBP2.68□□□□□ -1.98
BRCA1-212ENST00000473961 IGKV1-27A0A075B6S5 117 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 TGIF2-C20orf24A0A0A6YYL0 155 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 BORCS7-ASMTA0A0B4J1R7 106 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 IGHV6-1A0A0B4J1U7 121 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 IGHV3-72A0A0B4J1Y9 119 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 A0A1B0GV72 72 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 FTCDNL1E5RQL4 147 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 H3BQ15 152 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 CLDN34H7C241 214 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 CCL22O00626 93 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 CDIPTO14735 213 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 TNFSF15O95150 251 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 HLA-AP01891 365 aaKnown RBP2.68□□□□□ -1.98
BRCA1-212ENST00000473961 C1QCP02747 245 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 MRPL3P09001 348 aaKnown RBP2.68□□□□□ -1.98
BRCA1-212ENST00000473961 OR4A8P0C604 315 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 OR4Q2P0C623 313 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 ZNF286BP0CG31 522 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 CXCL8P10145 99 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 RPS4Y1P22090 263 aaKnown RBP2.68□□□□□ -1.98
BRCA1-212ENST00000473961 NPY1RP25929 384 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 TMEM33P57088 247 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 HBA1P69905 142 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 DHRS2Q13268 280 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 PMVKQ15126 192 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 GUSBP1Q15486 140 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 SLC9A3R2Q15599 337 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 ZBTB6Q15916 424 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 SMIM21Q3B7S5 101 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 BSXQ3C1V8 233 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 TMEM176BQ3YBM2 270 aaPredicted RBP2.68□□□□□ -1.98
BRCA1-212ENST00000473961 C5orf47Q569G3 176 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 OCIAD2Q56VL3 154 aa2.68□□□□□ -1.98
BRCA1-212ENST00000473961 ZNF684Q5T5D7 378 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms