RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 NDUFS8O00217 210 aa14.35□□□□□ -0.11
VARS2-206ENST00000473916 GATA2P23769 480 aaPredicted RBP14.35□□□□□ -0.11
VARS2-206ENST00000473916 NPBWR1P48145 328 aa14.35□□□□□ -0.11
VARS2-206ENST00000473916 FAM120AOSQ5T036 256 aa14.35□□□□□ -0.11
VARS2-206ENST00000473916 MINOS1Q5TGZ0 78 aa14.35□□□□□ -0.11
VARS2-206ENST00000473916 STPG3Q8N7X2 389 aa14.35□□□□□ -0.11
VARS2-206ENST00000473916 SRSF12Q8WXF0 261 aaKnown RBP14.35□□□□□ -0.11
VARS2-206ENST00000473916 RNF5Q99942 180 aa14.35□□□□□ -0.11
VARS2-206ENST00000473916 MINOS1-NBL1R4GNA1 71 aa14.35□□□□□ -0.11
VARS2-206ENST00000473916 CTXND1A0A1B0GTU2 59 aa14.34□□□□□ -0.11
VARS2-206ENST00000473916 MBP02144 154 aa14.34□□□□□ -0.11
VARS2-206ENST00000473916 ACOT6Q3I5F7 207 aaPredicted RBP14.34□□□□□ -0.11
VARS2-206ENST00000473916 ACY3Q96HD9 319 aa14.34□□□□□ -0.11
VARS2-206ENST00000473916 CENPVL3A0A0U1RRI6 287 aa14.34□□□□□ -0.11
VARS2-206ENST00000473916 LOC102723971A0A1B0GUV8 181 aa14.34□□□□□ -0.11
VARS2-206ENST00000473916 NUPL2O15504 423 aaKnown RBP14.34□□□□□ -0.11
VARS2-206ENST00000473916 NDUFA3O95167 84 aa14.34□□□□□ -0.11
VARS2-206ENST00000473916 B2MP61769 119 aa14.34□□□□□ -0.11
VARS2-206ENST00000473916 PAX8Q06710 450 aa14.34□□□□□ -0.11
VARS2-206ENST00000473916 ZNF506Q5JVG8 444 aa14.34□□□□□ -0.11
VARS2-206ENST00000473916 TMEM144Q7Z5S9 345 aa14.34□□□□□ -0.11
VARS2-206ENST00000473916 GATAD1Q8WUU5 269 aa14.34□□□□□ -0.11
VARS2-206ENST00000473916 FAM103A1Q9BTL3 118 aaKnown RBP14.34□□□□□ -0.11
VARS2-206ENST00000473916 NKX6-2Q9C056 277 aaPredicted RBP14.34□□□□□ -0.11
VARS2-206ENST00000473916 DMRT1Q9Y5R6 373 aa14.34□□□□□ -0.11
VARS2-206ENST00000473916 MAS1LP35410 378 aa14.33□□□□□ -0.12
VARS2-206ENST00000473916 CDC34P49427 236 aaPredicted RBP14.33□□□□□ -0.12
VARS2-206ENST00000473916 CCDC144NLQ6NUI1 221 aa14.33□□□□□ -0.12
VARS2-206ENST00000473916 SVBPQ8N300 66 aa14.33□□□□□ -0.12
VARS2-206ENST00000473916 NPBQ8NG41 125 aa14.33□□□□□ -0.12
VARS2-206ENST00000473916 ACTR3CQ9C0K3 210 aaPredicted RBP14.33□□□□□ -0.12
VARS2-206ENST00000473916 SLC35B3Q9H1N7 401 aa14.33□□□□□ -0.12
VARS2-206ENST00000473916 TMA7Q9Y2S6 64 aaKnown RBP14.33□□□□□ -0.12
VARS2-206ENST00000473916 IGHV3-21A0A0B4J1V1 117 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 FAM74A7A6NL05 159 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 FNDC10F2Z333 226 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 LINC00869P0C866 280 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 OR10J1P30954 320 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 CEBPGP53567 150 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 ATP5IP56385 69 aaPredicted RBP14.32□□□□□ -0.12
VARS2-206ENST00000473916 FAM74A3Q4VXF1 159 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 Q8N6K4 173 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 OR2T10Q8NGZ9 312 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 MISP3Q96FF7 219 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 TBL2Q9Y4P3 447 aaKnown RBP14.32□□□□□ -0.12
VARS2-206ENST00000473916 ZANQ9Y493 2812 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 NPFFO15130 113 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 CNIH1O95406 144 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 SRP19P09132 144 aaKnown RBP14.32□□□□□ -0.12
VARS2-206ENST00000473916 BCL2P10415 239 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 PRR20EP86478 221 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 PRR20CP86479 221 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 PRR20DP86480 221 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 PRR20BP86481 221 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 PRR20AP86496 221 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 SPATA31B1PQ5VZV4 182 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 SLC45A2Q9UMX9 530 aa14.32□□□□□ -0.12
VARS2-206ENST00000473916 NCBP2LA6PVI3 153 aaKnown RBP14.31□□□□□ -0.12
VARS2-206ENST00000473916 OOSP1A8MZH6 123 aa14.31□□□□□ -0.12
VARS2-206ENST00000473916 SEC14L6B5MCN3 397 aa14.31□□□□□ -0.12
VARS2-206ENST00000473916 CLEC12BQ2HXU8 276 aa14.31□□□□□ -0.12
VARS2-206ENST00000473916 C5orf64Q2M2E5 130 aa14.31□□□□□ -0.12
VARS2-206ENST00000473916 IQCF2Q8IXL9 164 aa14.31□□□□□ -0.12
VARS2-206ENST00000473916 CYB561D1Q8N8Q1 229 aa14.31□□□□□ -0.12
VARS2-206ENST00000473916 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.31□□□□□ -0.123e-7■■■□□ 18.9
VARS2-206ENST00000473916 CYB5BO43169 146 aa14.31□□□□□ -0.12
VARS2-206ENST00000473916 SUB1P53999 127 aaKnown RBP eCLIP14.31□□□□□ -0.121e-7■■■■■ 35.4
VARS2-206ENST00000473916 BRD3OSQ6XYD6 125 aa14.31□□□□□ -0.12
VARS2-206ENST00000473916 RNASEH2CQ8TDP1 164 aaKnown RBP14.31□□□□□ -0.12
VARS2-206ENST00000473916 NPIPB3Q92617 1050 aa14.31□□□□□ -0.12
VARS2-206ENST00000473916 MALSU1Q96EH3 234 aa14.31□□□□□ -0.12
VARS2-206ENST00000473916 APCP25054 2843 aa14.3□□□□□ -0.12
VARS2-206ENST00000473916 TRAV40A0A0B4J280 105 aa14.3□□□□□ -0.12
VARS2-206ENST00000473916 PAX1P15863 534 aa14.3□□□□□ -0.12
VARS2-206ENST00000473916 TMEM11P17152 192 aa14.3□□□□□ -0.12
VARS2-206ENST00000473916 GPX4P36969 197 aaPredicted RBP14.3□□□□□ -0.12
VARS2-206ENST00000473916 RPL29P47914 159 aaKnown RBP14.3□□□□□ -0.12
VARS2-206ENST00000473916 NDPQ00604 133 aa14.3□□□□□ -0.12
VARS2-206ENST00000473916 ZNF114Q8NC26 417 aa14.3□□□□□ -0.12
VARS2-206ENST00000473916 ABHD5Q8WTS1 349 aa14.3□□□□□ -0.12
VARS2-206ENST00000473916 SLC35E1Q96K37 410 aa14.3□□□□□ -0.12
VARS2-206ENST00000473916 SEPSECSQ9HD40 501 aaKnown RBP14.3□□□□□ -0.12
VARS2-206ENST00000473916 SOX21Q9Y651 276 aaPredicted RBP14.3□□□□□ -0.12
VARS2-206ENST00000473916 EBI3Q14213 229 aa14.29□□□□□ -0.12
VARS2-206ENST00000473916 FXYD3Q14802 87 aa14.29□□□□□ -0.12
VARS2-206ENST00000473916 AKIRIN2Q53H80 203 aa14.29□□□□□ -0.12
VARS2-206ENST00000473916 PVRIGQ6DKI7 326 aa14.29□□□□□ -0.12
VARS2-206ENST00000473916 HIST2H2BCQ6DN03 193 aa14.29□□□□□ -0.12
VARS2-206ENST00000473916 TMEM88Q6PEY1 159 aa14.29□□□□□ -0.12
VARS2-206ENST00000473916 CACNG8Q8WXS5 425 aa14.29□□□□□ -0.12
VARS2-206ENST00000473916 SLC25A33Q9BSK2 321 aa14.29□□□□□ -0.12
VARS2-206ENST00000473916 IGKV1D-37A0A075B6S9 117 aa14.29□□□□□ -0.12
VARS2-206ENST00000473916 A0A1W2PPV4 95 aa14.29□□□□□ -0.12
VARS2-206ENST00000473916 DNASE2O00115 360 aaPredicted RBP14.29□□□□□ -0.12
VARS2-206ENST00000473916 RND2P52198 227 aa14.29□□□□□ -0.12
VARS2-206ENST00000473916 RAB31Q13636 194 aa14.29□□□□□ -0.12
VARS2-206ENST00000473916 KHDC3LQ587J8 217 aa14.29□□□□□ -0.12
VARS2-206ENST00000473916 MAPK1IP1LQ8NDC0 245 aa14.29□□□□□ -0.12
VARS2-206ENST00000473916 C20orf24Q9BUV8 137 aa14.29□□□□□ -0.12
VARS2-206ENST00000473916 F11RQ9Y624 299 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms