RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 FAM58AQ8N1B3 248 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ZADH2Q8N4Q0 377 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 KCNRGQ8N5I3 272 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 FAM71E2Q8N5Q1 922 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 TPRX1Q8N7U7 411 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SLC35G3Q8N808 338 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM185AQ8NFB2 350 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 OR8H1Q8NGG4 311 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 OR5A2Q8NGI9 324 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 OR52M1Q8NGK5 317 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 OR4D5Q8NGN0 318 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 OR1L1Q8NH94 360 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 TERB2Q8NHR7 220 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ANGPTL6Q8NI99 470 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 C8orf46Q8TAG6 207 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 FAM57AQ8TBR7 257 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 GLYATL2Q8WU03 294 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 C15orf40Q8WUR7 153 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 LRRC29Q8WV35 223 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ASB13Q8WXK3 278 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 DCUN1D4Q92564 292 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 RDH5Q92781 318 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 MRPS24Q96EL2 167 aaKnown RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 CPNE2Q96FN4 548 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 FAHD2AQ96GK7 314 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SEC22AQ96IW7 307 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 LINC00052Q96N35 136 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 FAM210AQ96ND0 272 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 GAFA1Q96PS6 74 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 AQP10Q96PS8 301 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 OR2V2Q96R30 315 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 RAB40CQ96S21 281 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SSX3Q99909 188 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 RNF126Q9BV68 326 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ST6GALNAC5Q9BVH7 336 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 RTL8AQ9BWD3 113 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SFXN3Q9BWM7 321 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 MRPL37Q9BZE1 423 aaKnown RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 PKIBQ9C010 78 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SLC5A7Q9GZV3 580 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ARL6Q9H0F7 186 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ALX4Q9H161 411 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SH3BGRL3Q9H299 93 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 IFI27L2Q9H2X8 130 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 RANBP3Q9H6Z4 567 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF442Q9H7R0 627 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF286AQ9HBT8 521 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 RAB18Q9NP72 206 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 C12orf4Q9NQ89 552 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 CCL28Q9NRJ3 127 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 GLRX2Q9NS18 164 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ASF1BQ9NVP2 202 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 NECAP2Q9NVZ3 263 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 PLEKHJ1Q9NW61 149 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SDHAF2Q9NX18 166 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 RASL12Q9NYN1 266 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ZNRD1Q9P1U0 126 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SHPKQ9UHJ6 478 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 KIF25Q9UIL4 384 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SH3BGRL2Q9UJC5 107 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF391Q9UJN7 358 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 PAIP2BQ9ULR5 123 aaKnown RBP1.04□□□□□ -2.24
CCDC39-203ENST00000473854 SLC7A11Q9UPY5 501 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF835Q9Y2P0 537 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 MEMO1Q9Y316 297 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 FBXO7Q9Y3I1 522 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 MPC1Q9Y5U8 109 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 RFNGQ9Y644 331 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 U3KQ87 197 aa1.04□□□□□ -2.24
CCDC39-203ENST00000473854 FAT3Q8TDW7 4589 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TENM2Q9NT68 2774 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TRAV3A0A0B4J244 114 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 KIR2DS1A0A191URI9 304 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 C3orf85A0A1B0GTC6 90 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 KANTRA0A1W2PQU2 76 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM30CPA0ZSE6 113 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ODAMA1E959 279 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 NKX2-6A6NCS4 301 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 DPRXA6NFQ7 191 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TUBAL3A6NHL2 446 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 C17orf98A8MV24 154 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TRDCB7Z8K6 153 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 E7EQL1 145 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 H0Y980 276 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 H3BP45 60 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 MKRN2OSH3BPM6 223 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 I3L521 148 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 LGALS8O00214 317 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 GPR31O00270 319 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ABCD4O14678 606 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 BET1O15155 118 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 FGF16O43320 207 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 SSSCA1O60232 199 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 RAMP3O60896 148 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 PITX3O75364 302 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 DEDDO75618 318 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 EIF3GO75821 320 aaKnown RBP eCLIP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 MMP23AO75900 390 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 OR2F2O95006 317 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 DIRAS3O95661 229 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms