RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 ZNF816Q0VGE8 651 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-205ENST00000473344 FHL3Q13643 280 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 EBI3Q14213 229 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 KISS1Q15726 138 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 KHDC3LQ587J8 217 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 COL5A1-AS1Q5SY13 56 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 TMEM268Q5VZI3 342 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 SSX7Q7RTT5 188 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 ZNF429Q86V71 674 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 NKAIN3Q8N8D7 197 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 RNF152Q8N8N0 203 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 Q8N9W7 124 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 OR1N2Q8NGR9 330 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 SECTM1Q8WVN6 248 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 S1PR3Q99500 378 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 GPER1Q99527 375 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 SELENOIQ9C0D9 397 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 TMEM231Q9H6L2 316 aa5.4□□□□□ -1.54
CKS1B-205ENST00000473344 LYSTQ99698 3801 aa5.4□□□□□ -1.55
CKS1B-205ENST00000473344 STARD9Q9P2P6 4700 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 TRBV24-1A0A075B6N3 115 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 TRBV5-7A0A0A0MS05 114 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 TRAV24A0A0B4J272 114 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 C13orf42A0A1B0GVH6 325 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 C20orf202A1L168 122 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 TMEM235A6NFC5 223 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 E5RGE8 158 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 SDCBPO00560 298 aaPredicted RBP5.39□□□□□ -1.55
CKS1B-205ENST00000473344 HIST1H2BKO60814 126 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 PMP2P02689 132 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 PRH1P02810 166 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 IGF1P05019 195 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 HIST1H2BJP06899 126 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 FRMD6-AS1P0C7T7 363 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 CGB3P0DN86 165 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 CGB7P0DN87 165 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 HIST1H2BOP23527 126 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 PSMB8P28062 276 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 CD1BP29016 333 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 HIST1H2BBP33778 126 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 HIST1H2BDP58876 126 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 RPS11P62280 158 aaKnown RBP eCLIP5.39□□□□□ -1.55
CKS1B-205ENST00000473344 HIST1H2BCP62807 126 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 ZNF266Q14584 549 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 HIST2H2BEQ16778 126 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 C21orf62-AS1Q17RA5 79 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.39□□□□□ -1.55
CKS1B-205ENST00000473344 C1orf194Q5T5A4 169 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 LEMD1Q68G75 181 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 ZFAND6Q6FIF0 208 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 CDPF1Q6NVV7 123 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 PRR18Q8N4B5 295 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 OR51A4Q8NGJ6 313 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 OR10AC1Q8NH08 325 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 RTN4IP1Q8WWV3 396 aaPredicted RBP5.39□□□□□ -1.55
CKS1B-205ENST00000473344 HIST1H2BHQ93079 126 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 FAM46BQ96A09 425 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 TMEM106AQ96A25 262 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 FAM3DQ96BQ1 224 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 SEC22AQ96IW7 307 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 FAM210BQ96KR6 192 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 UBE2E2Q96LR5 201 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 OR5B12Q96R08 314 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 HIST1H2BNQ99877 126 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 HIST1H2BMQ99879 126 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 TMEM208Q9BTX3 173 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 SLC5A7Q9GZV3 580 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 SLC25A31Q9H0C2 315 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 ARV1Q9H2C2 271 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 LINC00574Q9H8X3 128 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 OR2S2Q9NQN1 319 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 RAB22AQ9UL26 194 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 VSIG4Q9Y279 399 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 NSG2Q9Y328 171 aa5.39□□□□□ -1.55
CKS1B-205ENST00000473344 TRAV39A0A0B4J263 110 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 TMEM30CPA0ZSE6 113 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 OVOL1O14753 267 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 OR7C1O76099 320 aaPredicted RBP5.38□□□□□ -1.55
CKS1B-205ENST00000473344 SFT2D2O95562 160 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 MBPP02686 304 aaPredicted RBP5.38□□□□□ -1.55
CKS1B-205ENST00000473344 PTHLHP12272 177 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 GP9P14770 177 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 G0S2P27469 103 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 LPAR6P43657 344 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 RND2P52198 227 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 NANOS3P60323 173 aaKnown RBP5.38□□□□□ -1.55
CKS1B-205ENST00000473344 SRSF3P84103 164 aaKnown RBP5.38□□□□□ -1.55
CKS1B-205ENST00000473344 PAX5Q02548 391 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 CFHR3Q02985 330 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 IL13RA2Q14627 380 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 MMDQ15546 238 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 PIGYQ3MUY2 71 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 FAAP20Q6NZ36 180 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 KCTD9Q7L273 389 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 JAGN1Q8N5M9 183 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 Q8N6K4 173 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 SLC35G3Q8N808 338 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 OR52M1Q8NGK5 317 aa5.38□□□□□ -1.55
CKS1B-205ENST00000473344 OR13C5Q8NGS8 318 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms