RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 AHNAK2Q8IVF2 5795 aa0.87□□□□□ -2.27
CLCC1-208ENST00000473062 PCDH15Q96QU1 1955 aa0.87□□□□□ -2.27
CLCC1-208ENST00000473062 PTPRSQ13332 1948 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.86□□□□□ -2.27
CLCC1-208ENST00000473062 INMT-MINDY4F8WBC2 141 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 J3QRK9 145 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 PROSCO94903 275 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 IFNA5P01569 189 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 ASAH2BP0C7U1 165 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 HIST1H1EP10412 219 aaKnown RBP0.86□□□□□ -2.27
CLCC1-208ENST00000473062 OMPP47874 163 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 CEBPGP53567 150 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 OR2F1Q13607 317 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 SPOPLQ6IQ16 392 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 OOSP2Q86WS3 158 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 PFN4Q8NHR9 129 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 NIPSNAP1Q9BPW8 284 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 XPNPEP1Q9NQW7 623 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 CISHQ9NSE2 258 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 FBXL12Q9NXK8 326 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 KLK9Q9UKQ9 250 aa0.86□□□□□ -2.27
CLCC1-208ENST00000473062 KIF24Q5T7B8 1368 aa0.85□□□□□ -2.27
CLCC1-208ENST00000473062 MYH11P35749 1972 aa0.85□□□□□ -2.27
CLCC1-208ENST00000473062 DPRXA6NFQ7 191 aa0.85□□□□□ -2.27
CLCC1-208ENST00000473062 MIFP14174 115 aa0.85□□□□□ -2.27
CLCC1-208ENST00000473062 S100A4P26447 101 aaKnown RBP0.85□□□□□ -2.27
CLCC1-208ENST00000473062 NKX2-5P52952 324 aaPredicted RBP0.85□□□□□ -2.27
CLCC1-208ENST00000473062 RAB4BP61018 213 aa0.85□□□□□ -2.27
CLCC1-208ENST00000473062 SNRPD2P62316 118 aaKnown RBP0.85□□□□□ -2.27
CLCC1-208ENST00000473062 RHEBQ15382 184 aa0.85□□□□□ -2.27
CLCC1-208ENST00000473062 KHDC3LQ587J8 217 aa0.85□□□□□ -2.27
CLCC1-208ENST00000473062 PTRHD1Q6GMV3 140 aaKnown RBP0.85□□□□□ -2.27
CLCC1-208ENST00000473062 BPIFA4PQ86YQ2 179 aa0.85□□□□□ -2.27
CLCC1-208ENST00000473062 ANKRD29Q8N6D5 301 aa0.85□□□□□ -2.27
CLCC1-208ENST00000473062 WDR90Q96KV7 1748 aa0.85□□□□□ -2.27
CLCC1-208ENST00000473062 SLC50A1Q9BRV3 221 aa0.85□□□□□ -2.27
CLCC1-208ENST00000473062 C20orf27Q9GZN8 174 aa0.85□□□□□ -2.27
CLCC1-208ENST00000473062 TAS2R4Q9NYW5 299 aa0.85□□□□□ -2.27
CLCC1-208ENST00000473062 NUP155O75694 1391 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 PQLC2LA1A4F0 135 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 FADS1O60427 444 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 CRYZL1O95825 349 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 IFNA16P05015 189 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 SERPINA6P08185 405 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 RBP1P09455 135 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 RNASE3P12724 160 aaKnown RBP0.84□□□□□ -2.27
CLCC1-208ENST00000473062 HIST1H1TP22492 207 aaPredicted RBP0.84□□□□□ -2.27
CLCC1-208ENST00000473062 YPEL3P61236 119 aaPredicted RBP0.84□□□□□ -2.27
CLCC1-208ENST00000473062 CDKL4Q5MAI5 379 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 OR6V1Q8N148 313 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 HIST3H2BBQ8N257 126 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 OR5A1Q8NGJ0 315 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 DNAJC9Q8WXX5 260 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 ITFG2Q969R8 447 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 BORCS7Q96B45 105 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 CMSS1Q9BQ75 279 aaKnown RBP0.84□□□□□ -2.27
CLCC1-208ENST00000473062 CCDC90BQ9GZT6 254 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 ACER3Q9NUN7 267 aa0.84□□□□□ -2.27
CLCC1-208ENST00000473062 POLEQ07864 2286 aa0.84□□□□□ -2.28
CLCC1-208ENST00000473062 MED12LQ86YW9 2145 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 RP1P56715 2156 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 LOC110117498A0A087WWA1 95 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 TRBV6-7A0A0A0MS04 114 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.83□□□□□ -2.28
CLCC1-208ENST00000473062 EXOC1LA0A1B0GW35 172 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 PIRO00625 290 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 OR1I1O60431 355 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 RHOGP84095 191 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 PDE6HQ13956 83 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 ACOT6Q3I5F7 207 aaPredicted RBP0.83□□□□□ -2.28
CLCC1-208ENST00000473062 KRT222Q8N1A0 295 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 LINC00311Q8N616 119 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 C15orf53Q8NAA6 179 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 OR51D1Q8NGF3 324 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 ARL5BQ96KC2 179 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 RASL12Q9NYN1 266 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 ERGIC3Q9Y282 383 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 SLC35A3Q9Y2D2 325 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 CPAMD8Q8IZJ3 1885 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 GREB1Q4ZG55 1949 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 GLI3P10071 1580 aa0.83□□□□□ -2.28
CLCC1-208ENST00000473062 CACNA1BQ00975 2339 aa0.82□□□□□ -2.28
CLCC1-208ENST00000473062 C7orf71A4D174 169 aa0.82□□□□□ -2.28
CLCC1-208ENST00000473062 UBL3O95164 117 aa0.82□□□□□ -2.28
CLCC1-208ENST00000473062 IGKV1-5P01602 117 aa0.82□□□□□ -2.28
CLCC1-208ENST00000473062 CLPSP04118 112 aa0.82□□□□□ -2.28
CLCC1-208ENST00000473062 CTSDP07339 412 aaPredicted RBP0.82□□□□□ -2.28
CLCC1-208ENST00000473062 AP3S2P59780 193 aa0.82□□□□□ -2.28
CLCC1-208ENST00000473062 IMPG1Q17R60 797 aa0.82□□□□□ -2.28
CLCC1-208ENST00000473062 C8orf74Q6P047 294 aa0.82□□□□□ -2.28
CLCC1-208ENST00000473062 ALKAL1Q6UXT8 129 aa0.82□□□□□ -2.28
CLCC1-208ENST00000473062 Q6ZQT0 140 aa0.82□□□□□ -2.28
CLCC1-208ENST00000473062 CLVS1Q8IUQ0 354 aaPredicted RBP0.82□□□□□ -2.28
CLCC1-208ENST00000473062 TERB2Q8NHR7 220 aa0.82□□□□□ -2.28
CLCC1-208ENST00000473062 TEX47Q8TBZ9 253 aa0.82□□□□□ -2.28
CLCC1-208ENST00000473062 H1FXQ92522 213 aaKnown RBP0.82□□□□□ -2.28
CLCC1-208ENST00000473062 C2orf50Q96LR7 162 aa0.82□□□□□ -2.28
CLCC1-208ENST00000473062 MYOFQ9NZM1 2061 aa0.81□□□□□ -2.28
CLCC1-208ENST00000473062 TOPBP1Q92547 1522 aa0.81□□□□□ -2.28
CLCC1-208ENST00000473062 TTRP02766 147 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms