RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 ST8SIA3O43173 380 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 DEDDO75618 318 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 HRASP01112 189 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 IGHV4-59P01825 116 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 GAPDHP04406 335 aaKnown RBP5.07□□□□□ -1.6
HDAC1-205ENST00000472928 OR9G9P0C7N8 305 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 SAA1P0DJI8 122 aaPredicted RBP5.07□□□□□ -1.6
HDAC1-205ENST00000472928 SLC25A4P12235 298 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 SAA4P35542 130 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 UBE2E1P51965 193 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 RAB5BP61020 215 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 IL15RAQ13261 267 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 DNLZQ5SXM8 178 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 LDLRAD2Q5SZI1 272 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 MINOS1Q5TGZ0 78 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 OR4A47Q6IF82 309 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 CCDC144NLQ6NUI1 221 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 PRSS54Q6PEW0 395 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 BPIFCQ8NFQ6 507 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 OSR1Q8TAX0 266 aaPredicted RBP5.07□□□□□ -1.6
HDAC1-205ENST00000472928 ZFP57Q9NU63 452 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 TNFSF18Q9UNG2 199 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 CARHSP1Q9Y2V2 147 aaKnown RBP5.07□□□□□ -1.6
HDAC1-205ENST00000472928 NSG2Q9Y328 171 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 TBL2Q9Y4P3 447 aaKnown RBP5.07□□□□□ -1.6
HDAC1-205ENST00000472928 MINOS1-NBL1R4GNA1 71 aa5.07□□□□□ -1.6
HDAC1-205ENST00000472928 IGHV1-69DA0A0B4J2H0 117 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 TMEM218A2RU14 115 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 RNF222A6NCQ9 220 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 MSGN1A6NI15 193 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 FAM90A9PA6NNJ1 464 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 C15orf61A6NNL5 157 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 E5RGE8 158 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 SLC25A17O43808 307 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 PITX3O75364 302 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 KBTBD11O94819 623 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 IGHV1-69P01742 117 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 SPP1P10451 314 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 IAPPP10997 89 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 LYL1P12980 280 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 GPX4P36969 197 aaPredicted RBP5.06□□□□□ -1.6
HDAC1-205ENST00000472928 BPIFB3P59826 476 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 SPCS3P61009 180 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 RPS16P62249 146 aaKnown RBP5.06□□□□□ -1.6
HDAC1-205ENST00000472928 VAMP2P63027 116 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 TNFRSF9Q07011 255 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 SSX2Q16385 188 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 POU2AF1Q16633 256 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 VMA21Q3ZAQ7 101 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 LBHQ53QV2 105 aaPredicted RBP5.06□□□□□ -1.6
HDAC1-205ENST00000472928 SPINK9Q5DT21 86 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 CXorf66Q5JRM2 361 aaPredicted RBP5.06□□□□□ -1.6
HDAC1-205ENST00000472928 GPR157Q5UAW9 335 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 Q6ZRM9 215 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 SLC16A13Q7RTY0 426 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 ZNF546Q86UE3 836 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 INO80EQ8NBZ0 244 aaPredicted RBP5.06□□□□□ -1.6
HDAC1-205ENST00000472928 OR4C13Q8NGP0 309 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 OR4A16Q8NH70 328 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 CFHR4Q92496 578 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 FLYWCH2Q96CP2 140 aaKnown RBP5.06□□□□□ -1.6
HDAC1-205ENST00000472928 PHYHIPLQ96FC7 376 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 TSNAXQ99598 290 aaKnown RBP5.06□□□□□ -1.6
HDAC1-205ENST00000472928 RNF126Q9BV68 326 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 QTRT1Q9BXR0 403 aaKnown RBP5.06□□□□□ -1.6
HDAC1-205ENST00000472928 MFFQ9GZY8 342 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 ARL6Q9H0F7 186 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 METTL1Q9UBP6 276 aaKnown RBP5.06□□□□□ -1.6
HDAC1-205ENST00000472928 DNAH7Q8WXX0 4024 aa5.06□□□□□ -1.6
HDAC1-205ENST00000472928 TRAV3A0A0B4J244 114 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 CENPVL3A0A0U1RRI6 287 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 CEBPZOSA8MTT3 80 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 OOSP1A8MZH6 123 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 FAM90A26D6RGX4 464 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 H3BP45 60 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 K7EIL1 84 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 SYNGR2O43760 224 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 MED6O75586 246 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 OR2F2O95006 317 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 IFNA10P01566 189 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 IFNA17P01571 189 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 IGLV2-23P01705 113 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 SNRNP70P08621 437 aaKnown RBP5.05□□□□□ -1.6
HDAC1-205ENST00000472928 CNTFRP26992 372 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 MC5RP33032 325 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 IER3P46695 156 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 CAV2P51636 162 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 TAS2R60P59551 318 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 CD81P60033 236 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 TMEM267Q0VDI3 215 aaPredicted RBP5.05□□□□□ -1.6
HDAC1-205ENST00000472928 OR2F1Q13607 317 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 HES1Q14469 280 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 ZNF345Q14585 488 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 RNF151Q2KHN1 245 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 ALKAL2Q6UX46 152 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 PUSL1Q8N0Z8 303 aaKnown RBP5.05□□□□□ -1.6
HDAC1-205ENST00000472928 DYNAPQ8N1N2 210 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 OR2C3Q8N628 320 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 VSTM2AQ8TAG5 236 aa5.05□□□□□ -1.6
HDAC1-205ENST00000472928 WWC2-AS2Q96NR7 200 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms