RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 H3BP45 60 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 I3L2K1 104 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 MED6O75586 246 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 TSPAN15O95858 294 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 IGHV3-48P01763 117 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 HIST1H1BP16401 226 aaKnown RBP11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 NPY1RP25929 384 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 SNCAP37840 140 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 RRAS2P62070 204 aaPredicted RBP11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 ATP5G2Q06055 141 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 EXOSC2Q13868 293 aaKnown RBP11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 C15orf32Q32M92 178 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 C2orf83Q53S99 150 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 FAM223AQ8IWN6 122 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 MRPL41Q8IXM3 137 aaKnown RBP11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 NECAP1Q8NC96 275 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 CCDC140Q96MF4 163 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 HIPK2Q9H2X6 1198 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 FNDC4Q9H6D8 234 aaPredicted RBP11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 CACFD1Q9UGQ2 172 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 IGHV4OR15-8A0A075B7B6 117 aa11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 A0A087WW49 117 aa11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 NUDT19A8MXV4 375 aa11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 H0YIZ8 118 aa11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 CCNKO75909 580 aa11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 MT-CO2P00403 227 aa11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 IFNA10P01566 189 aa11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 LGALS1P09382 135 aaKnown RBP11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 HTR2BP41595 481 aa11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 ZNF343Q6P1L6 599 aa11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 SCARB1Q8WTV0 552 aa11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 CHAC2Q8WUX2 184 aa11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 C4orf3Q8WVX3 66 aa11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 PINX1Q96BK5 328 aaKnown RBP11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 RAX2Q96IS3 184 aa11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 USMG5Q96IX5 58 aa11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 NMES1Q9C002 83 aa11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 MRPL36Q9P0J6 103 aaKnown RBP11.31□□□□□ -0.6
SMARCD3-207ENST00000472103 A0A0G2JLM5 398 aa11.3□□□□□ -0.6
SMARCD3-207ENST00000472103 ANKRD34BA5PLL1 514 aa11.3□□□□□ -0.6
SMARCD3-207ENST00000472103 F8W735 103 aaPredicted RBP11.3□□□□□ -0.6
SMARCD3-207ENST00000472103 S100A10P60903 97 aa11.3□□□□□ -0.6
SMARCD3-207ENST00000472103 LRRC37A5PQ49AS3 106 aa11.3□□□□□ -0.6
SMARCD3-207ENST00000472103 SPANXN5Q5MJ07 72 aa11.3□□□□□ -0.6
SMARCD3-207ENST00000472103 OR1L6Q8NGR2 347 aa11.3□□□□□ -0.6
SMARCD3-207ENST00000472103 ZNF502Q8TBZ5 544 aa11.3□□□□□ -0.6
SMARCD3-207ENST00000472103 PSENENQ9NZ42 101 aa11.3□□□□□ -0.6
SMARCD3-207ENST00000472103 U3KQ87 197 aa11.3□□□□□ -0.6
SMARCD3-207ENST00000472103 PMS2P5A8MQ11 134 aa11.29□□□□□ -0.6
SMARCD3-207ENST00000472103 SUB1P53999 127 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMARCD3-207ENST00000472103 RUNX1Q01196 453 aa11.29□□□□□ -0.6
SMARCD3-207ENST00000472103 CLEC19AQ6UXS0 136 aa11.29□□□□□ -0.6
SMARCD3-207ENST00000472103 OR11H1Q8NG94 326 aa11.29□□□□□ -0.6
SMARCD3-207ENST00000472103 SMIM8Q96KF7 97 aa11.29□□□□□ -0.6
SMARCD3-207ENST00000472103 CIB3Q96Q77 187 aaPredicted RBP11.29□□□□□ -0.6
SMARCD3-207ENST00000472103 OR5AC2Q9NZP5 309 aa11.29□□□□□ -0.6
SMARCD3-207ENST00000472103 PAIP2BQ9ULR5 123 aaKnown RBP11.29□□□□□ -0.6
SMARCD3-207ENST00000472103 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 TRAV14DV4A0A0A6YYC5 116 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 A0A1B0GVG6 124 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 FAM24AA6NFZ4 105 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 PRSS46E5RG02 174 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 PPP5D1E7EU14 171 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 Q5BKY6 102 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 HAPLN4Q86UW8 402 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 VN1R17PQ8TDU5 208 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 PPP1R1CQ8WVI7 109 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 EEF1AKMT3Q96AZ1 226 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 ZNF414Q96IQ9 312 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 RAB40CQ96S21 281 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 RNF126Q9BV68 326 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 ZC4H2Q9NQZ6 224 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 C21orf62Q9NYP8 219 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 THYN1Q9P016 225 aa11.28□□□□□ -0.6
SMARCD3-207ENST00000472103 CCL24O00175 119 aa11.27□□□□□ -0.61
SMARCD3-207ENST00000472103 BMPR1BO00238 502 aa11.27□□□□□ -0.61
SMARCD3-207ENST00000472103 DEDDO75618 318 aa11.27□□□□□ -0.61
SMARCD3-207ENST00000472103 OPRK1P41145 380 aa11.27□□□□□ -0.61
SMARCD3-207ENST00000472103 SLURP1P55000 103 aa11.27□□□□□ -0.61
SMARCD3-207ENST00000472103 ARL16Q0P5N6 197 aa11.27□□□□□ -0.61
SMARCD3-207ENST00000472103 TMEM14EPQ6UXP3 125 aa11.27□□□□□ -0.61
SMARCD3-207ENST00000472103 OR1N2Q8NGR9 330 aa11.27□□□□□ -0.61
SMARCD3-207ENST00000472103 CXorf58Q96LI9 332 aa11.27□□□□□ -0.61
SMARCD3-207ENST00000472103 ZNF436Q9C0F3 470 aaPredicted RBP11.27□□□□□ -0.61
SMARCD3-207ENST00000472103 PEF1Q9UBV8 284 aaKnown RBP11.27□□□□□ -0.61
SMARCD3-207ENST00000472103 STRAPQ9Y3F4 350 aaKnown RBP11.27□□□□□ -0.61
SMARCD3-207ENST00000472103 hCG_2014768A0A024R1R8 64 aa11.26□□□□□ -0.61
SMARCD3-207ENST00000472103 L7N2F9 121 aa11.26□□□□□ -0.61
SMARCD3-207ENST00000472103 CYB5BO43169 146 aa11.26□□□□□ -0.61
SMARCD3-207ENST00000472103 TSC22D2O75157 780 aa11.26□□□□□ -0.61
SMARCD3-207ENST00000472103 MPC2O95563 127 aa11.26□□□□□ -0.61
SMARCD3-207ENST00000472103 HSPB1P04792 205 aaKnown RBP11.26□□□□□ -0.61
SMARCD3-207ENST00000472103 IFNA4P05014 189 aa11.26□□□□□ -0.61
SMARCD3-207ENST00000472103 CLEC3BP05452 202 aa11.26□□□□□ -0.61
SMARCD3-207ENST00000472103 OR8U8P0C7N1 319 aa11.26□□□□□ -0.61
SMARCD3-207ENST00000472103 METTL15P1P0C7V9 234 aa11.26□□□□□ -0.61
SMARCD3-207ENST00000472103 GPR183P32249 361 aa11.26□□□□□ -0.61
SMARCD3-207ENST00000472103 MYCNOSP40205 109 aa11.26□□□□□ -0.61
SMARCD3-207ENST00000472103 TAS2R30P59541 319 aa11.26□□□□□ -0.61
SMARCD3-207ENST00000472103 VAMP2P63027 116 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms