RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PDCD5O14737 125 aa13.54□□□□□ -0.24
SORT1-203ENST00000471996 SSX5O60225 188 aa13.54□□□□□ -0.24
SORT1-203ENST00000471996 GNG7O60262 68 aa13.54□□□□□ -0.24
SORT1-203ENST00000471996 ZNF688P0C7X2 276 aa13.54□□□□□ -0.24
SORT1-203ENST00000471996 SPART-AS1P0CW21 52 aa13.54□□□□□ -0.24
SORT1-203ENST00000471996 HSPA13P48723 471 aa13.54□□□□□ -0.24
SORT1-203ENST00000471996 ERVK-16P61578 105 aa13.54□□□□□ -0.24
SORT1-203ENST00000471996 OR51H1Q8NH63 302 aa13.54□□□□□ -0.24
SORT1-203ENST00000471996 MISP3Q96FF7 219 aa13.54□□□□□ -0.24
SORT1-203ENST00000471996 TMEM56Q96MV1 263 aa13.54□□□□□ -0.24
SORT1-203ENST00000471996 SLC5A7Q9GZV3 580 aa13.54□□□□□ -0.24
SORT1-203ENST00000471996 TMEM231Q9H6L2 316 aa13.54□□□□□ -0.24
SORT1-203ENST00000471996 NSG2Q9Y328 171 aa13.54□□□□□ -0.24
SORT1-203ENST00000471996 AGRNO00468 2067 aa13.54□□□□□ -0.24
SORT1-203ENST00000471996 TMEM235A6NFC5 223 aa13.53□□□□□ -0.24
SORT1-203ENST00000471996 MT-CO2P00403 227 aa13.53□□□□□ -0.24
SORT1-203ENST00000471996 PPYP01298 95 aa13.53□□□□□ -0.24
SORT1-203ENST00000471996 IGHV3-48P01763 117 aa13.53□□□□□ -0.24
SORT1-203ENST00000471996 STXBP6Q8NFX7 210 aa13.53□□□□□ -0.24
SORT1-203ENST00000471996 ZFAND3Q9H8U3 227 aa13.53□□□□□ -0.24
SORT1-203ENST00000471996 ACOT13Q9NPJ3 140 aa13.53□□□□□ -0.24
SORT1-203ENST00000471996 TRAV1-2A0A0B4J238 106 aa13.52□□□□□ -0.25
SORT1-203ENST00000471996 PTHLHP12272 177 aa13.52□□□□□ -0.25
SORT1-203ENST00000471996 GNG2P59768 71 aa13.52□□□□□ -0.25
SORT1-203ENST00000471996 ARPC4P59998 168 aa13.52□□□□□ -0.25
SORT1-203ENST00000471996 MLLT11Q13015 90 aaPredicted RBP13.52□□□□□ -0.25
SORT1-203ENST00000471996 AADACL3Q5VUY0 350 aa13.52□□□□□ -0.25
SORT1-203ENST00000471996 ZNF818PQ6ZRF7 136 aa13.52□□□□□ -0.25
SORT1-203ENST00000471996 CADM3Q8N126 398 aa13.52□□□□□ -0.25
SORT1-203ENST00000471996 C1QTNF4Q9BXJ3 329 aa13.52□□□□□ -0.25
SORT1-203ENST00000471996 RNF167Q9H6Y7 350 aa13.52□□□□□ -0.25
SORT1-203ENST00000471996 PUS1Q9Y606 427 aaKnown RBP eCLIP13.52□□□□□ -0.25
SORT1-203ENST00000471996 RGS10O43665 173 aa13.51□□□□□ -0.25
SORT1-203ENST00000471996 SNAPC5O75971 98 aa13.51□□□□□ -0.25
SORT1-203ENST00000471996 ZNF600Q6ZNG1 722 aa13.51□□□□□ -0.25
SORT1-203ENST00000471996 DCANP1Q8TF63 244 aa13.51□□□□□ -0.25
SORT1-203ENST00000471996 CCDC90BQ9GZT6 254 aa13.51□□□□□ -0.25
SORT1-203ENST00000471996 A0A1W2PS18 150 aa13.5□□□□□ -0.25
SORT1-203ENST00000471996 FAM3BP58499 235 aaPredicted RBP13.5□□□□□ -0.25
SORT1-203ENST00000471996 FXYD4P59646 89 aa13.5□□□□□ -0.25
SORT1-203ENST00000471996 PRSS48Q7RTY5 328 aa13.5□□□□□ -0.25
SORT1-203ENST00000471996 RAB40CQ96S21 281 aa13.5□□□□□ -0.25
SORT1-203ENST00000471996 NEU1Q99519 415 aa13.5□□□□□ -0.25
SORT1-203ENST00000471996 FKBP11Q9NYL4 201 aa13.5□□□□□ -0.25
SORT1-203ENST00000471996 XCL2Q9UBD3 114 aa13.5□□□□□ -0.25
SORT1-203ENST00000471996 PRNDQ9UKY0 176 aa13.5□□□□□ -0.25
SORT1-203ENST00000471996 DMBT1Q9UGM3 2413 aaPredicted RBP13.5□□□□□ -0.25
SORT1-203ENST00000471996 TMEM189A5PLL7 270 aa13.49□□□□□ -0.25
SORT1-203ENST00000471996 DBX1A6NMT0 343 aa13.49□□□□□ -0.25
SORT1-203ENST00000471996 KRASP01116 189 aa13.49□□□□□ -0.25
SORT1-203ENST00000471996 NPPCP23582 126 aa13.49□□□□□ -0.25
SORT1-203ENST00000471996 NUTF2P61970 127 aaKnown RBP13.49□□□□□ -0.25
SORT1-203ENST00000471996 C6orf223Q8N319 242 aa13.49□□□□□ -0.25
SORT1-203ENST00000471996 BEST4Q8NFU0 473 aa13.49□□□□□ -0.25
SORT1-203ENST00000471996 PINX1Q96BK5 328 aaKnown RBP13.49□□□□□ -0.25
SORT1-203ENST00000471996 MOB3AQ96BX8 217 aa13.49□□□□□ -0.25
SORT1-203ENST00000471996 BLOC1S6Q9UL45 172 aa13.49□□□□□ -0.25
SORT1-203ENST00000471996 A0A1B0GU03 582 aa13.48□□□□□ -0.25
SORT1-203ENST00000471996 RAB3BP20337 219 aa13.48□□□□□ -0.25
SORT1-203ENST00000471996 F2RP25116 425 aa13.48□□□□□ -0.25
SORT1-203ENST00000471996 FGF9P31371 208 aaPredicted RBP13.48□□□□□ -0.25
SORT1-203ENST00000471996 NPBWR1P48145 328 aa13.48□□□□□ -0.25
SORT1-203ENST00000471996 EMP1P54849 157 aa13.48□□□□□ -0.25
SORT1-203ENST00000471996 ZNF705AQ6ZN79 300 aaPredicted RBP13.48□□□□□ -0.25
SORT1-203ENST00000471996 TPRA1Q86W33 373 aa13.48□□□□□ -0.25
SORT1-203ENST00000471996 ZNF114Q8NC26 417 aa13.48□□□□□ -0.25
SORT1-203ENST00000471996 RAB26Q9ULW5 256 aa13.48□□□□□ -0.25
SORT1-203ENST00000471996 G6PCP35575 357 aa13.47□□□□□ -0.25
SORT1-203ENST00000471996 P2RY1P47900 373 aa13.47□□□□□ -0.25
SORT1-203ENST00000471996 IZUMO2Q6UXV1 221 aa13.47□□□□□ -0.25
SORT1-203ENST00000471996 FCAMRQ8WWV6 532 aa13.47□□□□□ -0.25
SORT1-203ENST00000471996 MGLLQ99685 303 aa13.47□□□□□ -0.25
SORT1-203ENST00000471996 NIPSNAP3BQ9BS92 247 aa13.47□□□□□ -0.25
SORT1-203ENST00000471996 DKK2Q9UBU2 259 aa13.47□□□□□ -0.25
SORT1-203ENST00000471996 TMED3Q9Y3Q3 217 aa13.47□□□□□ -0.25
SORT1-203ENST00000471996 NACAE9PAV3 2078 aa13.47□□□□□ -0.25
SORT1-203ENST00000471996 NBDYA0A0U1RRE5 68 aa13.46□□□□□ -0.25
SORT1-203ENST00000471996 SMIM9A6NGZ8 99 aa13.46□□□□□ -0.25
SORT1-203ENST00000471996 SCGNO76038 276 aa13.46□□□□□ -0.25
SORT1-203ENST00000471996 MYL9P24844 172 aa13.46□□□□□ -0.25
SORT1-203ENST00000471996 CRYBB3P26998 211 aa13.46□□□□□ -0.25
SORT1-203ENST00000471996 GNRHRP30968 328 aa13.46□□□□□ -0.25
SORT1-203ENST00000471996 LPAR6P43657 344 aa13.46□□□□□ -0.25
SORT1-203ENST00000471996 KCTD21Q4G0X4 260 aa13.46□□□□□ -0.25
SORT1-203ENST00000471996 PSMG4Q5JS54 123 aa13.46□□□□□ -0.25
SORT1-203ENST00000471996 TMEM88Q6PEY1 159 aa13.46□□□□□ -0.25
SORT1-203ENST00000471996 SPATA12Q7Z6I5 190 aa13.46□□□□□ -0.25
SORT1-203ENST00000471996 TMEM17Q86X19 198 aa13.46□□□□□ -0.25
SORT1-203ENST00000471996 HOGA1Q86XE5 327 aa13.46□□□□□ -0.25
SORT1-203ENST00000471996 METTL26Q96S19 204 aa13.46□□□□□ -0.25
SORT1-203ENST00000471996 YTHDF1Q9BYJ9 559 aaKnown RBP13.46□□□□□ -0.25
SORT1-203ENST00000471996 FAT1Q14517 4588 aa13.45□□□□□ -0.26
SORT1-203ENST00000471996 TEX48A0A1B0GUV7 120 aa13.45□□□□□ -0.26
SORT1-203ENST00000471996 ZNF705FA8MVS1 300 aaPredicted RBP13.45□□□□□ -0.26
SORT1-203ENST00000471996 TMEM50AO95807 157 aa13.45□□□□□ -0.26
SORT1-203ENST00000471996 ZNF705DP0CH99 300 aaPredicted RBP13.45□□□□□ -0.26
SORT1-203ENST00000471996 ZNF705BP0CI00 300 aaPredicted RBP13.45□□□□□ -0.26
SORT1-203ENST00000471996 HTN3P15516 51 aa13.45□□□□□ -0.26
SORT1-203ENST00000471996 OXA1LQ15070 435 aa13.45□□□□□ -0.26
SORT1-203ENST00000471996 BORCS5Q969J3 196 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms