RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ACOX3O15254 700 aa-0.51□□□□□ -2.49
PRPF40A-207ENST00000471701 KLF7O75840 302 aaPredicted RBP-0.51□□□□□ -2.49
PRPF40A-207ENST00000471701 TCL1BO95988 128 aa-0.51□□□□□ -2.49
PRPF40A-207ENST00000471701 PET100P0DJ07 73 aa-0.51□□□□□ -2.49
PRPF40A-207ENST00000471701 CDC34P49427 236 aaPredicted RBP-0.51□□□□□ -2.49
PRPF40A-207ENST00000471701 GUK1Q16774 197 aa-0.51□□□□□ -2.49
PRPF40A-207ENST00000471701 GLT8D1Q68CQ7 371 aa-0.51□□□□□ -2.49
PRPF40A-207ENST00000471701 KRTAP26-1Q6PEX3 210 aa-0.51□□□□□ -2.49
PRPF40A-207ENST00000471701 SPINK6Q6UWN8 80 aa-0.51□□□□□ -2.49
PRPF40A-207ENST00000471701 C3orf56Q8N813 242 aa-0.51□□□□□ -2.49
PRPF40A-207ENST00000471701 GPR32P1Q8NGA4 272 aa-0.51□□□□□ -2.49
PRPF40A-207ENST00000471701 OR5A1Q8NGJ0 315 aa-0.51□□□□□ -2.49
PRPF40A-207ENST00000471701 GINS4Q9BRT9 223 aa-0.51□□□□□ -2.49
PRPF40A-207ENST00000471701 POLR1DQ9Y2S0 133 aa-0.51□□□□□ -2.49
PRPF40A-207ENST00000471701 PTPRZ1P23471 2315 aaPredicted RBP-0.52□□□□□ -2.49
PRPF40A-207ENST00000471701 TRBV20OR9-2A0A075B6H5 130 aa-0.52□□□□□ -2.49
PRPF40A-207ENST00000471701 TRAV3A0A0B4J244 114 aa-0.52□□□□□ -2.49
PRPF40A-207ENST00000471701 HPGDSO60760 199 aa-0.52□□□□□ -2.49
PRPF40A-207ENST00000471701 BAALC-AS2P0C853 105 aa-0.52□□□□□ -2.49
PRPF40A-207ENST00000471701 RHEBQ15382 184 aa-0.52□□□□□ -2.49
PRPF40A-207ENST00000471701 RSU1Q15404 277 aa-0.52□□□□□ -2.49
PRPF40A-207ENST00000471701 KHDC3LQ587J8 217 aa-0.52□□□□□ -2.49
PRPF40A-207ENST00000471701 LINC00322Q6ZN03 302 aaPredicted RBP-0.52□□□□□ -2.49
PRPF40A-207ENST00000471701 SLC51BQ86UW2 128 aa-0.52□□□□□ -2.49
PRPF40A-207ENST00000471701 SMIM19Q96E16 107 aa-0.52□□□□□ -2.49
PRPF40A-207ENST00000471701 OTOGQ6ZRI0 2925 aa-0.53□□□□□ -2.49
PRPF40A-207ENST00000471701 F5H768 121 aa-0.53□□□□□ -2.49
PRPF40A-207ENST00000471701 SULT1B1O43704 296 aa-0.53□□□□□ -2.49
PRPF40A-207ENST00000471701 DPPA3Q6W0C5 159 aa-0.53□□□□□ -2.49
PRPF40A-207ENST00000471701 LINC00575Q6W349 94 aa-0.53□□□□□ -2.49
PRPF40A-207ENST00000471701 COMMD7Q86VX2 200 aa-0.53□□□□□ -2.49
PRPF40A-207ENST00000471701 CLECL1Q8IZS7 167 aa-0.53□□□□□ -2.49
PRPF40A-207ENST00000471701 DEFB125Q8N687 156 aa-0.53□□□□□ -2.49
PRPF40A-207ENST00000471701 MCFD2Q8NI22 146 aa-0.53□□□□□ -2.49
PRPF40A-207ENST00000471701 KLK6Q92876 244 aa-0.53□□□□□ -2.49
PRPF40A-207ENST00000471701 DIRAS2Q96HU8 199 aa-0.53□□□□□ -2.49
PRPF40A-207ENST00000471701 CNBD2Q96M20 576 aa-0.53□□□□□ -2.49
PRPF40A-207ENST00000471701 ASCC3Q8N3C0 2202 aaKnown RBP-0.53□□□□□ -2.49
PRPF40A-207ENST00000471701 TMEM213A2RRL7 107 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 INMT-MINDY4F8WBC2 141 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 IGLV3-1P01715 115 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 COX6A1P12074 109 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 HIST1H2BOP23527 126 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 KDELR1P24390 212 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 HIST1H2BBP33778 126 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 HIST1H2BDP58876 126 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 HIST1H2BCP62807 126 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 CAV1Q03135 178 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 HIST2H2BEQ16778 126 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 COQ5Q5HYK3 327 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 SPANXN3Q5MJ09 141 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 C6orf52Q5T4I8 152 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 SDHAF4Q5VUM1 108 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 TNFAIP8L2Q6P589 184 aaPredicted RBP-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 FUNDC1Q8IVP5 155 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 IQCF2Q8IXL9 164 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 HIST1H2BHQ93079 126 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 IMP4Q96G21 291 aaKnown RBP-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 HIST1H2BNQ99877 126 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 HIST1H2BMQ99879 126 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 WDR61Q9GZS3 305 aaKnown RBP-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 OR51I2Q9H344 312 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 TREM1Q9NP99 234 aa-0.54□□□□□ -2.5
PRPF40A-207ENST00000471701 A0A0D9SG52 128 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 TRBV6-4A0A1B0GX49 114 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 ZNF879B4DU55 563 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 ZNF137PP52743 207 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 AADACL4Q5VUY2 407 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 MIR17HGQ75NE6 70 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 TMEM156Q8N614 296 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 PLPP5Q8NEB5 264 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 TERB2Q8NHR7 220 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 DNAJB3Q8WWF6 145 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 DNAJC9Q8WXX5 260 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 KCTD7Q96MP8 289 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 OR52A5Q9H2C5 316 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 TMEM14CQ9P0S9 112 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 C15orf41Q9Y2V0 281 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 ANK2Q01484 3957 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 CELSR1Q9NYQ6 3014 aa-0.55□□□□□ -2.5
PRPF40A-207ENST00000471701 PQLC2LA1A4F0 135 aa-0.56□□□□□ -2.5
PRPF40A-207ENST00000471701 EVPLLA8MZ36 301 aa-0.56□□□□□ -2.5
PRPF40A-207ENST00000471701 IFITM2Q01629 132 aa-0.56□□□□□ -2.5
PRPF40A-207ENST00000471701 GRK1Q15835 563 aa-0.56□□□□□ -2.5
PRPF40A-207ENST00000471701 C12orf74Q32Q52 190 aa-0.56□□□□□ -2.5
PRPF40A-207ENST00000471701 CST9Q5W186 159 aa-0.56□□□□□ -2.5
PRPF40A-207ENST00000471701 OR10J5Q8NHC4 309 aa-0.56□□□□□ -2.5
PRPF40A-207ENST00000471701 COMMD5Q9GZQ3 224 aa-0.56□□□□□ -2.5
PRPF40A-207ENST00000471701 CHMP5Q9NZZ3 219 aa-0.56□□□□□ -2.5
PRPF40A-207ENST00000471701 KIF13BQ9NQT8 1826 aa-0.57□□□□□ -2.5
PRPF40A-207ENST00000471701 TLCD2A6NGC4 264 aa-0.57□□□□□ -2.5
PRPF40A-207ENST00000471701 TRPC5OSA6NMA1 111 aa-0.57□□□□□ -2.5
PRPF40A-207ENST00000471701 TYMSP04818 313 aa-0.57□□□□□ -2.5
PRPF40A-207ENST00000471701 CASQ1P31415 396 aa-0.57□□□□□ -2.5
PRPF40A-207ENST00000471701 FAM74A1Q5RGS3 127 aa-0.57□□□□□ -2.5
PRPF40A-207ENST00000471701 C1orf195Q5TG92 126 aa-0.57□□□□□ -2.5
PRPF40A-207ENST00000471701 RPL22L1Q6P5R6 122 aaKnown RBP-0.57□□□□□ -2.5
PRPF40A-207ENST00000471701 Q6ZS49 121 aa-0.57□□□□□ -2.5
PRPF40A-207ENST00000471701 SIGLECL1Q8N7X8 197 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms