RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 OR9G4Q8NGQ1 327 aa11.7□□□□□ -0.54
SDC3-203ENST00000471567 SCARB1Q8WTV0 552 aa11.7□□□□□ -0.54
SDC3-203ENST00000471567 OR4C12Q96R67 309 aa11.7□□□□□ -0.54
SDC3-203ENST00000471567 PPP5D1E7EU14 171 aa11.69□□□□□ -0.54
SDC3-203ENST00000471567 K7EIM0 57 aa11.69□□□□□ -0.54
SDC3-203ENST00000471567 SAP30O75446 220 aa11.69□□□□□ -0.54
SDC3-203ENST00000471567 HLA-AP01891 365 aaKnown RBP11.69□□□□□ -0.54
SDC3-203ENST00000471567 RNASE2P10153 161 aaKnown RBP11.69□□□□□ -0.54
SDC3-203ENST00000471567 ANXA7P20073 488 aaKnown RBP11.69□□□□□ -0.54
SDC3-203ENST00000471567 KRTAP10-11P60412 298 aa11.69□□□□□ -0.54
SDC3-203ENST00000471567 DHRS2Q13268 280 aa11.69□□□□□ -0.54
SDC3-203ENST00000471567 BSXQ3C1V8 233 aa11.69□□□□□ -0.54
SDC3-203ENST00000471567 COQ8AQ8NI60 647 aa11.69□□□□□ -0.54
SDC3-203ENST00000471567 C20orf85Q9H1P6 137 aa11.69□□□□□ -0.54
SDC3-203ENST00000471567 GAR1Q9NY12 217 aaKnown RBP11.69□□□□□ -0.54
SDC3-203ENST00000471567 C21orf62Q9NYP8 219 aa11.69□□□□□ -0.54
SDC3-203ENST00000471567 HSPB7Q9UBY9 170 aa11.69□□□□□ -0.54
SDC3-203ENST00000471567 TBC1D24Q9ULP9 559 aa11.69□□□□□ -0.54
SDC3-203ENST00000471567 CEBPZOSA8MTT3 80 aa11.68□□□□□ -0.54
SDC3-203ENST00000471567 I3L2K1 104 aa11.68□□□□□ -0.54
SDC3-203ENST00000471567 LGALS9O00182 355 aa11.68□□□□□ -0.54
SDC3-203ENST00000471567 CORTO00230 105 aa11.68□□□□□ -0.54
SDC3-203ENST00000471567 PITX3O75364 302 aa11.68□□□□□ -0.54
SDC3-203ENST00000471567 OR2C1O95371 312 aa11.68□□□□□ -0.54
SDC3-203ENST00000471567 FCGR2BP31994 310 aaPredicted RBP11.68□□□□□ -0.54
SDC3-203ENST00000471567 GPR183P32249 361 aa11.68□□□□□ -0.54
SDC3-203ENST00000471567 HTR2BP41595 481 aa11.68□□□□□ -0.54
SDC3-203ENST00000471567 TNFRSF9Q07011 255 aa11.68□□□□□ -0.54
SDC3-203ENST00000471567 C4orf46Q504U0 113 aa11.68□□□□□ -0.54
SDC3-203ENST00000471567 OR1S1Q8NH92 325 aa11.68□□□□□ -0.54
SDC3-203ENST00000471567 MISP3Q96FF7 219 aa11.68□□□□□ -0.54
SDC3-203ENST00000471567 TXN2Q99757 166 aa11.68□□□□□ -0.54
SDC3-203ENST00000471567 HEYLQ9NQ87 328 aaPredicted RBP11.68□□□□□ -0.54
SDC3-203ENST00000471567 AURKAIP1Q9NWT8 199 aaPredicted RBP11.68□□□□□ -0.54
SDC3-203ENST00000471567 SIGLEC8Q9NYZ4 499 aa11.68□□□□□ -0.54
SDC3-203ENST00000471567 PEMTQ9UBM1 199 aa11.68□□□□□ -0.54
SDC3-203ENST00000471567 FAM240BA0A1B0GVZ2 78 aa11.67□□□□□ -0.54
SDC3-203ENST00000471567 TGOLN2O43493 480 aa11.67□□□□□ -0.54
SDC3-203ENST00000471567 MT-CO2P00403 227 aa11.67□□□□□ -0.54
SDC3-203ENST00000471567 MFAP4P55083 255 aa11.67□□□□□ -0.54
SDC3-203ENST00000471567 FAM106AQ4KMX7 169 aa11.67□□□□□ -0.54
SDC3-203ENST00000471567 SPSB3Q6PJ21 355 aa11.67□□□□□ -0.54
SDC3-203ENST00000471567 PLET1Q6UQ28 207 aa11.67□□□□□ -0.54
SDC3-203ENST00000471567 IL34Q6ZMJ4 242 aa11.67□□□□□ -0.54
SDC3-203ENST00000471567 BSCL2Q96G97 398 aaPredicted RBP11.67□□□□□ -0.54
SDC3-203ENST00000471567 HIPK2Q9H2X6 1198 aa11.67□□□□□ -0.54
SDC3-203ENST00000471567 IGHV3-21A0A0B4J1V1 117 aa11.66□□□□□ -0.54
SDC3-203ENST00000471567 FAM90A26D6RGX4 464 aa11.66□□□□□ -0.54
SDC3-203ENST00000471567 F8W735 103 aaPredicted RBP11.66□□□□□ -0.54
SDC3-203ENST00000471567 PRB2P02812 416 aaPredicted RBP11.66□□□□□ -0.54
SDC3-203ENST00000471567 HOXB5P09067 269 aa11.66□□□□□ -0.54
SDC3-203ENST00000471567 IFITM3Q01628 133 aa11.66□□□□□ -0.54
SDC3-203ENST00000471567 C2orf83Q53S99 150 aa11.66□□□□□ -0.54
SDC3-203ENST00000471567 GGNBP1Q5YKI7 109 aa11.66□□□□□ -0.54
SDC3-203ENST00000471567 NOXA1Q86UR1 476 aa11.66□□□□□ -0.54
SDC3-203ENST00000471567 NUDT15Q9NV35 164 aa11.66□□□□□ -0.54
SDC3-203ENST00000471567 TRAV6A0A075B6T7 132 aa11.65□□□□□ -0.54
SDC3-203ENST00000471567 OR2T8A6NH00 312 aa11.65□□□□□ -0.54
SDC3-203ENST00000471567 IFNA21P01568 189 aa11.65□□□□□ -0.54
SDC3-203ENST00000471567 CSN3P07498 182 aa11.65□□□□□ -0.54
SDC3-203ENST00000471567 H2AFB2P0C5Z0 115 aa11.65□□□□□ -0.54
SDC3-203ENST00000471567 ATP5IP56385 69 aaPredicted RBP11.65□□□□□ -0.54
SDC3-203ENST00000471567 Q56UQ5 140 aa11.65□□□□□ -0.54
SDC3-203ENST00000471567 SLC24A4Q8NFF2 622 aa11.65□□□□□ -0.54
SDC3-203ENST00000471567 DTD1Q8TEA8 209 aa11.65□□□□□ -0.54
SDC3-203ENST00000471567 MITD1Q8WV92 249 aa11.65□□□□□ -0.54
SDC3-203ENST00000471567 PINX1Q96BK5 328 aaKnown RBP11.65□□□□□ -0.54
SDC3-203ENST00000471567 ZNF436Q9C0F3 470 aaPredicted RBP11.65□□□□□ -0.54
SDC3-203ENST00000471567 RBKSQ9H477 322 aa11.65□□□□□ -0.54
SDC3-203ENST00000471567 U3KQ87 197 aa11.65□□□□□ -0.54
SDC3-203ENST00000471567 MED6O75586 246 aa11.64□□□□□ -0.55
SDC3-203ENST00000471567 NXPH3O95157 252 aa11.64□□□□□ -0.55
SDC3-203ENST00000471567 IGLV1-51P01701 117 aa11.64□□□□□ -0.55
SDC3-203ENST00000471567 NPBWR1P48145 328 aa11.64□□□□□ -0.55
SDC3-203ENST00000471567 UBAC2Q8NBM4 344 aa11.64□□□□□ -0.55
SDC3-203ENST00000471567 DUSP18Q8NEJ0 188 aa11.64□□□□□ -0.55
SDC3-203ENST00000471567 RNASEH2CQ8TDP1 164 aaKnown RBP11.64□□□□□ -0.55
SDC3-203ENST00000471567 PALMDQ9NP74 551 aa11.64□□□□□ -0.55
SDC3-203ENST00000471567 ZC4H2Q9NQZ6 224 aa11.64□□□□□ -0.55
SDC3-203ENST00000471567 ZNF256Q9Y2P7 627 aaPredicted RBP11.64□□□□□ -0.55
SDC3-203ENST00000471567 RPS10-NUDT3A0A1W2PQS6 291 aa11.63□□□□□ -0.55
SDC3-203ENST00000471567 A8MWP6 167 aa11.63□□□□□ -0.55
SDC3-203ENST00000471567 NUPL2O15504 423 aaKnown RBP11.63□□□□□ -0.55
SDC3-203ENST00000471567 ADAP1O75689 374 aa11.63□□□□□ -0.55
SDC3-203ENST00000471567 CTSGP08311 255 aa11.63□□□□□ -0.55
SDC3-203ENST00000471567 NPY1RP25929 384 aa11.63□□□□□ -0.55
SDC3-203ENST00000471567 ADMP35318 185 aa11.63□□□□□ -0.55
SDC3-203ENST00000471567 ELLP55199 621 aaPredicted RBP11.63□□□□□ -0.55
SDC3-203ENST00000471567 DEFA1P59665 94 aa11.63□□□□□ -0.55
SDC3-203ENST00000471567 DEFA3P59666 94 aa11.63□□□□□ -0.55
SDC3-203ENST00000471567 ENKURQ8TC29 256 aa11.63□□□□□ -0.55
SDC3-203ENST00000471567 CHRDL1Q9BU40 450 aa11.63□□□□□ -0.55
SDC3-203ENST00000471567 WI2-2373I1.2A0A1W2PRP0 233 aa11.62□□□□□ -0.55
SDC3-203ENST00000471567 ZNF320A2RRD8 509 aa11.62□□□□□ -0.55
SDC3-203ENST00000471567 C2orf70A6NJV1 201 aa11.62□□□□□ -0.55
SDC3-203ENST00000471567 K7EIL1 84 aa11.62□□□□□ -0.55
SDC3-203ENST00000471567 NDUFA4O00483 81 aa11.62□□□□□ -0.55
SDC3-203ENST00000471567 GNG7O60262 68 aa11.62□□□□□ -0.55
SDC3-203ENST00000471567 LY86O95711 162 aa11.62□□□□□ -0.55
SDC3-203ENST00000471567 IFNA10P01566 189 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms